RNA–Protein interactions for RNA: ENST00000600868.5

UPF1-211, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-211ENST00000600868 ZFR2Q9UPR6 939 aaKnown RBP14.34□□□□□ -0.11
UPF1-211ENST00000600868 CHMP2BQ9UQN3 213 aa14.34□□□□□ -0.11
UPF1-211ENST00000600868 KCTD3Q9Y597 815 aa14.34□□□□□ -0.11
UPF1-211ENST00000600868 A0A1W2PQU0 124 aa14.33□□□□□ -0.12
UPF1-211ENST00000600868 IGLON5A6NGN9 336 aa14.33□□□□□ -0.12
UPF1-211ENST00000600868 WNT9AO14904 365 aa14.33□□□□□ -0.12
UPF1-211ENST00000600868 BUD23O43709 281 aaKnown RBP14.33□□□□□ -0.12
UPF1-211ENST00000600868 LZTS3O60299 673 aaPredicted RBP14.33□□□□□ -0.12
UPF1-211ENST00000600868 RNGTTO60942 597 aaKnown RBP14.33□□□□□ -0.12
UPF1-211ENST00000600868 TM7SF2O76062 418 aa14.33□□□□□ -0.12
UPF1-211ENST00000600868 SLC4A1P02730 911 aa14.33□□□□□ -0.12
UPF1-211ENST00000600868 POLBP06746 335 aa14.33□□□□□ -0.12
UPF1-211ENST00000600868 GM2AP17900 193 aa14.33□□□□□ -0.12
UPF1-211ENST00000600868 NMBRP28336 390 aa14.33□□□□□ -0.12
UPF1-211ENST00000600868 HADHAP40939 763 aa14.33□□□□□ -0.12
UPF1-211ENST00000600868 FNTBP49356 437 aa14.33□□□□□ -0.12
UPF1-211ENST00000600868 CCR5P51681 352 aa14.33□□□□□ -0.12
UPF1-211ENST00000600868 ACOX1Q15067 660 aa14.33□□□□□ -0.12
UPF1-211ENST00000600868 ZNF528Q3MIS6 628 aa14.33□□□□□ -0.12
UPF1-211ENST00000600868 ANKRD20A4Q4UJ75 823 aa14.33□□□□□ -0.12
UPF1-211ENST00000600868 SPANXN3Q5MJ09 141 aa14.33□□□□□ -0.12
UPF1-211ENST00000600868 STEAP4Q687X5 459 aa14.33□□□□□ -0.12
UPF1-211ENST00000600868 SEL1L3Q68CR1 1132 aa14.33□□□□□ -0.12
UPF1-211ENST00000600868 SLC36A4Q6YBV0 504 aa14.33□□□□□ -0.12
UPF1-211ENST00000600868 ANKMY2Q8IV38 441 aa14.33□□□□□ -0.12
UPF1-211ENST00000600868 OR13C4Q8NGS5 318 aa14.33□□□□□ -0.12
UPF1-211ENST00000600868 OR13J1Q8NGT2 312 aa14.33□□□□□ -0.12
UPF1-211ENST00000600868 ASB12Q8WXK4 309 aa14.33□□□□□ -0.12
UPF1-211ENST00000600868 NELL1Q92832 810 aa14.33□□□□□ -0.12
UPF1-211ENST00000600868 MFSD3Q96ES6 412 aa14.33□□□□□ -0.12
UPF1-211ENST00000600868 DTD2Q96FN9 168 aa14.33□□□□□ -0.12
UPF1-211ENST00000600868 DNAJC1Q96KC8 554 aaKnown RBP14.33□□□□□ -0.12
UPF1-211ENST00000600868 GPR174Q9BXC1 333 aa14.33□□□□□ -0.12
UPF1-211ENST00000600868 C1QTNF1Q9BXJ1 281 aa14.33□□□□□ -0.12
UPF1-211ENST00000600868 C1QTNF2Q9BXJ5 285 aa14.33□□□□□ -0.12
UPF1-211ENST00000600868 TXLNGYQ9BZA5 131 aa14.33□□□□□ -0.12
UPF1-211ENST00000600868 NFKBIL1Q9UBC1 381 aaPredicted RBP14.33□□□□□ -0.12
UPF1-211ENST00000600868 MBD1Q9UIS9 605 aaPredicted RBP14.33□□□□□ -0.12
UPF1-211ENST00000600868 RPS6KL1Q9Y6S9 549 aa14.33□□□□□ -0.12
UPF1-211ENST00000600868 NUMA1Q14980 2115 aa14.33□□□□□ -0.12
UPF1-211ENST00000600868 KMT2EQ8IZD2 1858 aa14.33□□□□□ -0.12
UPF1-211ENST00000600868 SCN8AQ9UQD0 1980 aa14.33□□□□□ -0.12
UPF1-211ENST00000600868 PRR23AA6NEV1 266 aa14.32□□□□□ -0.12
UPF1-211ENST00000600868 FAM47DPA6NHR8 397 aa14.32□□□□□ -0.12
UPF1-211ENST00000600868 H7C0S8 307 aa14.32□□□□□ -0.12
UPF1-211ENST00000600868 LATO43561 262 aa14.32□□□□□ -0.12
UPF1-211ENST00000600868 RPP40O75818 363 aaKnown RBP14.32□□□□□ -0.12
UPF1-211ENST00000600868 RECQL5O94762 991 aaPredicted RBP14.32□□□□□ -0.12
UPF1-211ENST00000600868 TSHRP16473 764 aa14.32□□□□□ -0.12
UPF1-211ENST00000600868 BPIP17213 487 aa14.32□□□□□ -0.12
UPF1-211ENST00000600868 PAMP19021 973 aa14.32□□□□□ -0.12
UPF1-211ENST00000600868 ETV3P41162 512 aa14.32□□□□□ -0.12
UPF1-211ENST00000600868 DCDC1P59894 354 aa14.32□□□□□ -0.12
UPF1-211ENST00000600868 PPP2CBP62714 309 aa14.32□□□□□ -0.12
UPF1-211ENST00000600868 PPP2CAP67775 309 aa14.32□□□□□ -0.12
UPF1-211ENST00000600868 FRG1Q14331 258 aaKnown RBP14.32□□□□□ -0.12
UPF1-211ENST00000600868 PTPRCAPQ14761 206 aa14.32□□□□□ -0.12
UPF1-211ENST00000600868 ZNF284Q2VY69 593 aa14.32□□□□□ -0.12
UPF1-211ENST00000600868 KIAA0895LQ68EN5 471 aa14.32□□□□□ -0.12
UPF1-211ENST00000600868 KIAA0930Q6ICG6 404 aaPredicted RBP14.32□□□□□ -0.12
UPF1-211ENST00000600868 ESRP1Q6NXG1 681 aaKnown RBP14.32□□□□□ -0.12
UPF1-211ENST00000600868 EMBQ6PCB8 327 aa14.32□□□□□ -0.12
UPF1-211ENST00000600868 CES3Q6UWW8 571 aa14.32□□□□□ -0.12
UPF1-211ENST00000600868 Q6ZVL8 140 aa14.32□□□□□ -0.12
UPF1-211ENST00000600868 ZNF765Q7L2R6 523 aa14.32□□□□□ -0.12
UPF1-211ENST00000600868 NLRP8Q86W28 1048 aa14.32□□□□□ -0.12
UPF1-211ENST00000600868 PALM2Q8IXS6 379 aa14.32□□□□□ -0.12
UPF1-211ENST00000600868 FAM160A2Q8N612 972 aaPredicted RBP14.32□□□□□ -0.12
UPF1-211ENST00000600868 FRMD1Q8N878 549 aa14.32□□□□□ -0.12
UPF1-211ENST00000600868 CADM4Q8NFZ8 388 aa14.32□□□□□ -0.12
UPF1-211ENST00000600868 DTX3LQ8TDB6 740 aa14.32□□□□□ -0.12
UPF1-211ENST00000600868 AENQ8WTP8 325 aaKnown RBP14.32□□□□□ -0.12
UPF1-211ENST00000600868 ZNF669Q96BR6 464 aaPredicted RBP14.32□□□□□ -0.12
UPF1-211ENST00000600868 CDKN2AIPNLQ96HQ2 116 aa14.32□□□□□ -0.12
UPF1-211ENST00000600868 C9orf72Q96LT7 481 aa14.32□□□□□ -0.12
UPF1-211ENST00000600868 TTC25Q96NG3 672 aa14.32□□□□□ -0.12
UPF1-211ENST00000600868 FCRL3Q96P31 734 aaPredicted RBP14.32□□□□□ -0.12
UPF1-211ENST00000600868 PLEKHG4BQ96PX9 1271 aa14.32□□□□□ -0.12
UPF1-211ENST00000600868 SLC17A9Q9BYT1 436 aa14.32□□□□□ -0.12
UPF1-211ENST00000600868 BPIFA1Q9NP55 256 aa14.32□□□□□ -0.12
UPF1-211ENST00000600868 SLC2A6Q9UGQ3 507 aa14.32□□□□□ -0.12
UPF1-211ENST00000600868 FAM169AQ9Y6X4 670 aa14.32□□□□□ -0.12
UPF1-211ENST00000600868 EML5Q05BV3 1969 aa14.32□□□□□ -0.12
UPF1-211ENST00000600868 LRRK1Q38SD2 2015 aa14.32□□□□□ -0.12
UPF1-211ENST00000600868 TRPM6Q9BX84 2022 aa14.32□□□□□ -0.12
UPF1-211ENST00000600868 ZCWPW2A0A1B0GU75 182 aa14.31□□□□□ -0.12
UPF1-211ENST00000600868 CCDC78A2IDD5 438 aa14.31□□□□□ -0.12
UPF1-211ENST00000600868 NDUFS2O75306 463 aa14.31□□□□□ -0.12
UPF1-211ENST00000600868 SPAG6O75602 509 aa14.31□□□□□ -0.12
UPF1-211ENST00000600868 GSTA2P09210 222 aa14.31□□□□□ -0.12
UPF1-211ENST00000600868 NUDT1P36639 197 aa14.31□□□□□ -0.12
UPF1-211ENST00000600868 SPAM1P38567 509 aa14.31□□□□□ -0.12
UPF1-211ENST00000600868 ARSDP51689 593 aa14.31□□□□□ -0.12
UPF1-211ENST00000600868 TMPRSS15P98073 1019 aa14.31□□□□□ -0.12
UPF1-211ENST00000600868 DPTQ07507 201 aa14.31□□□□□ -0.12
UPF1-211ENST00000600868 SGCGQ13326 291 aa14.31□□□□□ -0.12
UPF1-211ENST00000600868 CRYMQ14894 314 aa14.31□□□□□ -0.12
UPF1-211ENST00000600868 BRD3Q15059 726 aa14.31□□□□□ -0.12
UPF1-211ENST00000600868 MAP9Q49MG5 647 aa14.31□□□□□ -0.12
UPF1-211ENST00000600868 UNC5AQ6ZN44 842 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms