RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 MSS51Q4VC12 460 aa19.98■□□□□ 0.79
SHKBP1-222ENST00000600320 SETMARQ53H47 684 aaPredicted RBP19.98■□□□□ 0.79
SHKBP1-222ENST00000600320 GPR26Q8NDV2 337 aa19.98■□□□□ 0.79
SHKBP1-222ENST00000600320 OR13C4Q8NGS5 318 aa19.98■□□□□ 0.79
SHKBP1-222ENST00000600320 DNASE2BQ8WZ79 361 aa19.98■□□□□ 0.79
SHKBP1-222ENST00000600320 ART4Q93070 314 aa19.98■□□□□ 0.79
SHKBP1-222ENST00000600320 NUS1Q96E22 293 aa19.98■□□□□ 0.79
SHKBP1-222ENST00000600320 RANBP9Q96S59 729 aa19.98■□□□□ 0.79
SHKBP1-222ENST00000600320 ABCG8Q9H221 673 aa19.98■□□□□ 0.79
SHKBP1-222ENST00000600320 EPC1Q9H2F5 836 aa19.98■□□□□ 0.79
SHKBP1-222ENST00000600320 MBNL1Q9NR56 388 aaKnown RBP19.98■□□□□ 0.79
SHKBP1-222ENST00000600320 BFARQ9NZS9 450 aa19.98■□□□□ 0.79
SHKBP1-222ENST00000600320 TCAF1Q9Y4C2 921 aa19.98■□□□□ 0.79
SHKBP1-222ENST00000600320 WDFY4Q6ZS81 3184 aa19.98■□□□□ 0.79
SHKBP1-222ENST00000600320 ATXN2Q99700 1313 aaKnown RBP19.98■□□□□ 0.79
SHKBP1-222ENST00000600320 PLXNA2O75051 1894 aa19.97■□□□□ 0.79
SHKBP1-222ENST00000600320 MROH6A6NGR9 719 aa19.97■□□□□ 0.79
SHKBP1-222ENST00000600320 SMAPO00193 183 aa19.97■□□□□ 0.79
SHKBP1-222ENST00000600320 AP3B1O00203 1094 aa19.97■□□□□ 0.79
SHKBP1-222ENST00000600320 CRTAMO95727 393 aa19.97■□□□□ 0.79
SHKBP1-222ENST00000600320 LPOP22079 712 aaPredicted RBP19.97■□□□□ 0.79
SHKBP1-222ENST00000600320 ITPKAP23677 461 aa19.97■□□□□ 0.79
SHKBP1-222ENST00000600320 ADRA1DP25100 572 aa19.97■□□□□ 0.79
SHKBP1-222ENST00000600320 CD27P26842 260 aa19.97■□□□□ 0.79
SHKBP1-222ENST00000600320 IGFALSP35858 605 aa19.97■□□□□ 0.79
SHKBP1-222ENST00000600320 PLTPP55058 493 aa19.97■□□□□ 0.79
SHKBP1-222ENST00000600320 TMPRSS15P98073 1019 aa19.97■□□□□ 0.79
SHKBP1-222ENST00000600320 DHX9Q08211 1270 aaKnown RBP19.97■□□□□ 0.79
SHKBP1-222ENST00000600320 IRF4Q15306 451 aa19.97■□□□□ 0.79
SHKBP1-222ENST00000600320 SPDYCQ5MJ68 293 aa19.97■□□□□ 0.79
SHKBP1-222ENST00000600320 LYSMD4Q5XG99 296 aa19.97■□□□□ 0.79
SHKBP1-222ENST00000600320 ALS2CLQ60I27 953 aa19.97■□□□□ 0.79
SHKBP1-222ENST00000600320 ZC3H14Q6PJT7 736 aaKnown RBP19.97■□□□□ 0.79
SHKBP1-222ENST00000600320 CYP2U1Q7Z449 544 aa19.97■□□□□ 0.79
SHKBP1-222ENST00000600320 OR4K2Q8NGD2 314 aa19.97■□□□□ 0.79
SHKBP1-222ENST00000600320 FBXO25Q8TCJ0 367 aa19.97■□□□□ 0.79
SHKBP1-222ENST00000600320 SCAMP4Q969E2 229 aa19.97■□□□□ 0.79
SHKBP1-222ENST00000600320 CENPTQ96BT3 561 aa19.97■□□□□ 0.79
SHKBP1-222ENST00000600320 DNAJC1Q96KC8 554 aaKnown RBP19.97■□□□□ 0.79
SHKBP1-222ENST00000600320 SIGLEC10Q96LC7 697 aa19.97■□□□□ 0.79
SHKBP1-222ENST00000600320 ZNF778Q96MU6 729 aa19.97■□□□□ 0.79
SHKBP1-222ENST00000600320 SLC6A18Q96N87 628 aa19.97■□□□□ 0.79
SHKBP1-222ENST00000600320 TRIM56Q9BRZ2 755 aaKnown RBP19.97■□□□□ 0.79
SHKBP1-222ENST00000600320 IL22Q9GZX6 179 aa19.97■□□□□ 0.79
SHKBP1-222ENST00000600320 ZDHHC18Q9NUE0 388 aa19.97■□□□□ 0.79
SHKBP1-222ENST00000600320 PKD2L2Q9NZM6 624 aa19.97■□□□□ 0.79
SHKBP1-222ENST00000600320 MUC6Q6W4X9 2439 aa19.97■□□□□ 0.79
SHKBP1-222ENST00000600320 SPAG17Q6Q759 2223 aa19.96■□□□□ 0.79
SHKBP1-222ENST00000600320 HEATR9A2RTY3 570 aa19.96■□□□□ 0.79
SHKBP1-222ENST00000600320 C2orf81A6NN90 581 aa19.96■□□□□ 0.79
SHKBP1-222ENST00000600320 CCL22O00626 93 aa19.96■□□□□ 0.79
SHKBP1-222ENST00000600320 NDC80O14777 642 aa19.96■□□□□ 0.79
SHKBP1-222ENST00000600320 STX7O15400 261 aaKnown RBP19.96■□□□□ 0.79
SHKBP1-222ENST00000600320 HNRNPA2B1P22626 353 aaKnown RBP19.96■□□□□ 0.79
SHKBP1-222ENST00000600320 CLDN2P57739 230 aa19.96■□□□□ 0.79
SHKBP1-222ENST00000600320 PCID2Q5JVF3 399 aa19.96■□□□□ 0.79
SHKBP1-222ENST00000600320 TSTD2Q5T7W7 516 aa19.96■□□□□ 0.79
SHKBP1-222ENST00000600320 RGL4Q8IZJ4 473 aa19.96■□□□□ 0.79
SHKBP1-222ENST00000600320 TMEM145Q8NBT3 493 aa19.96■□□□□ 0.79
SHKBP1-222ENST00000600320 PLA2G15Q8NCC3 412 aa19.96■□□□□ 0.79
SHKBP1-222ENST00000600320 PPHLN1Q8NEY8 458 aaKnown RBP19.96■□□□□ 0.79
SHKBP1-222ENST00000600320 C1orf216Q8TAB5 229 aa19.96■□□□□ 0.79
SHKBP1-222ENST00000600320 ATOH1Q92858 354 aaPredicted RBP19.96■□□□□ 0.79
SHKBP1-222ENST00000600320 LENG8Q96PV6 779 aaPredicted RBP19.96■□□□□ 0.79
SHKBP1-222ENST00000600320 AGAP2Q99490 1192 aa19.96■□□□□ 0.79
SHKBP1-222ENST00000600320 WDR83Q9BRX9 315 aaKnown RBP19.96■□□□□ 0.79
SHKBP1-222ENST00000600320 MIR1-1HGQ9H1L0 117 aa19.96■□□□□ 0.79
SHKBP1-222ENST00000600320 GDF3Q9NR23 364 aa19.96■□□□□ 0.79
SHKBP1-222ENST00000600320 CHRAC1Q9NRG0 131 aa19.96■□□□□ 0.79
SHKBP1-222ENST00000600320 FAM114A2Q9NRY5 505 aa19.96■□□□□ 0.79
SHKBP1-222ENST00000600320 SLC2A6Q9UGQ3 507 aa19.96■□□□□ 0.79
SHKBP1-222ENST00000600320 FKBPLQ9UIM3 349 aa19.96■□□□□ 0.79
SHKBP1-222ENST00000600320 DMTF1Q9Y222 760 aa19.96■□□□□ 0.79
SHKBP1-222ENST00000600320 SDK1Q7Z5N4 2213 aa19.95■□□□□ 0.78
SHKBP1-222ENST00000600320 RGSL1A5PLK6 1076 aa19.95■□□□□ 0.78
SHKBP1-222ENST00000600320 SDR42E2A6NKP2 422 aa19.95■□□□□ 0.78
SHKBP1-222ENST00000600320 K7ESM1 405 aa19.95■□□□□ 0.78
SHKBP1-222ENST00000600320 PPFIA2O75334 1257 aa19.95■□□□□ 0.78
SHKBP1-222ENST00000600320 PCCBP05166 539 aa19.95■□□□□ 0.78
SHKBP1-222ENST00000600320 ARSDP51689 593 aa19.95■□□□□ 0.78
SHKBP1-222ENST00000600320 LRRC14Q15048 493 aa19.95■□□□□ 0.78
SHKBP1-222ENST00000600320 BBS9Q3SYG4 887 aa19.95■□□□□ 0.78
SHKBP1-222ENST00000600320 CES3Q6UWW8 571 aa19.95■□□□□ 0.78
SHKBP1-222ENST00000600320 GCNT7Q6ZNI0 430 aa19.95■□□□□ 0.78
SHKBP1-222ENST00000600320 RAVER1Q8IY67 606 aaKnown RBP19.95■□□□□ 0.78
SHKBP1-222ENST00000600320 NRSN1Q8IZ57 195 aa19.95■□□□□ 0.78
SHKBP1-222ENST00000600320 ZCCHC9Q8N567 271 aaKnown RBP19.95■□□□□ 0.78
SHKBP1-222ENST00000600320 DENND6BQ8NEG7 585 aa19.95■□□□□ 0.78
SHKBP1-222ENST00000600320 STYXQ8WUJ0 223 aa19.95■□□□□ 0.78
SHKBP1-222ENST00000600320 SERAC1Q96JX3 654 aa19.95■□□□□ 0.78
SHKBP1-222ENST00000600320 BMFQ96LC9 184 aa19.95■□□□□ 0.78
SHKBP1-222ENST00000600320 RIOK2Q9BVS4 552 aaKnown RBP19.95■□□□□ 0.78
SHKBP1-222ENST00000600320 FRMD8Q9BZ67 464 aaPredicted RBP19.95■□□□□ 0.78
SHKBP1-222ENST00000600320 FAM83DQ9H4H8 585 aa19.95■□□□□ 0.78
SHKBP1-222ENST00000600320 TMEM74BQ9NUR3 256 aa19.95■□□□□ 0.78
SHKBP1-222ENST00000600320 NFKBIL1Q9UBC1 381 aaPredicted RBP19.95■□□□□ 0.78
SHKBP1-222ENST00000600320 SOX13Q9UN79 622 aa19.95■□□□□ 0.78
SHKBP1-222ENST00000600320 PRAMEF26H0Y7S4 382 aa19.94■□□□□ 0.78
SHKBP1-222ENST00000600320 H0Y8X5 98 aa19.94■□□□□ 0.78
SHKBP1-222ENST00000600320 GAPDHSO14556 408 aaPredicted RBP19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms