RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 FUCA2Q9BTY2 467 aa17.17■□□□□ 0.34
SMG9-210ENST00000600097 ADNPQ9H2P0 1102 aa17.17■□□□□ 0.34
SMG9-210ENST00000600097 SUDS3Q9H7L9 328 aaPredicted RBP17.17■□□□□ 0.34
SMG9-210ENST00000600097 PCDHGC4Q9Y5F7 938 aa17.17■□□□□ 0.34
SMG9-210ENST00000600097 NAV2Q8IVL1 2488 aa17.16■□□□□ 0.34
SMG9-210ENST00000600097 ARHGEF17Q96PE2 2063 aaPredicted RBP17.16■□□□□ 0.34
SMG9-210ENST00000600097 MBD3O95983 291 aa17.16■□□□□ 0.34
SMG9-210ENST00000600097 CPP00450 1065 aa17.16■□□□□ 0.34
SMG9-210ENST00000600097 FUCA1P04066 466 aa17.16■□□□□ 0.34
SMG9-210ENST00000600097 FGF3P11487 239 aaPredicted RBP17.16■□□□□ 0.34
SMG9-210ENST00000600097 TNFAIP3P21580 790 aa17.16■□□□□ 0.34
SMG9-210ENST00000600097 GNPDA1P46926 289 aa17.16■□□□□ 0.34
SMG9-210ENST00000600097 LIMK2P53671 638 aa17.16■□□□□ 0.34
SMG9-210ENST00000600097 CDK3Q00526 305 aa17.16■□□□□ 0.34
SMG9-210ENST00000600097 NFKB2Q00653 900 aa17.16■□□□□ 0.34
SMG9-210ENST00000600097 SQSTM1Q13501 440 aa17.16■□□□□ 0.34
SMG9-210ENST00000600097 SLC30A9Q6PML9 568 aa17.16■□□□□ 0.34
SMG9-210ENST00000600097 CBARPQ8N350 705 aaPredicted RBP17.16■□□□□ 0.34
SMG9-210ENST00000600097 BBS5Q8N3I7 341 aa17.16■□□□□ 0.34
SMG9-210ENST00000600097 ARFGAP1Q8N6T3 406 aa17.16■□□□□ 0.34
SMG9-210ENST00000600097 AGBL5Q8NDL9 886 aa17.16■□□□□ 0.34
SMG9-210ENST00000600097 PDCD6IPQ8WUM4 868 aaKnown RBP17.16■□□□□ 0.34
SMG9-210ENST00000600097 NKD1Q969G9 470 aa17.16■□□□□ 0.34
SMG9-210ENST00000600097 CCDC74BQ96LY2 380 aa17.16■□□□□ 0.34
SMG9-210ENST00000600097 NSMCE3Q96MG7 304 aa17.16■□□□□ 0.34
SMG9-210ENST00000600097 NUDCD1Q96RS6 583 aa17.16■□□□□ 0.34
SMG9-210ENST00000600097 PEBP4Q96S96 227 aa17.16■□□□□ 0.34
SMG9-210ENST00000600097 CDH19Q9H159 772 aa17.16■□□□□ 0.34
SMG9-210ENST00000600097 ZWILCHQ9H900 591 aa17.16■□□□□ 0.34
SMG9-210ENST00000600097 TAS2R14Q9NYV8 317 aa17.16■□□□□ 0.34
SMG9-210ENST00000600097 CWC15Q9P013 229 aaKnown RBP17.16■□□□□ 0.34
SMG9-210ENST00000600097 PHTF1Q9UMS5 762 aa17.16■□□□□ 0.34
SMG9-210ENST00000600097 SUFUQ9UMX1 484 aa17.16■□□□□ 0.34
SMG9-210ENST00000600097 SLC17A4Q9Y2C5 497 aa17.16■□□□□ 0.34
SMG9-210ENST00000600097 TMEM191CA6NGB0 347 aa17.15■□□□□ 0.34
SMG9-210ENST00000600097 CYSRT1A8MQ03 144 aa17.15■□□□□ 0.34
SMG9-210ENST00000600097 IVLP07476 585 aa17.15■□□□□ 0.34
SMG9-210ENST00000600097 ATP1A3P13637 1013 aa17.15■□□□□ 0.34
SMG9-210ENST00000600097 CR2P20023 1033 aa17.15■□□□□ 0.34
SMG9-210ENST00000600097 CDK11BP21127 795 aaKnown RBP17.15■□□□□ 0.34
SMG9-210ENST00000600097 AK4P27144 223 aaPredicted RBP17.15■□□□□ 0.34
SMG9-210ENST00000600097 MIPP30301 263 aa17.15■□□□□ 0.34
SMG9-210ENST00000600097 CSTF2P33240 577 aaKnown RBP eCLIP17.15■□□□□ 0.34
SMG9-210ENST00000600097 ETV3P41162 512 aa17.15■□□□□ 0.34
SMG9-210ENST00000600097 CTBSQ01459 385 aa17.15■□□□□ 0.34
SMG9-210ENST00000600097 MYL5Q02045 173 aa17.15■□□□□ 0.34
SMG9-210ENST00000600097 DPYSQ14117 519 aa17.15■□□□□ 0.34
SMG9-210ENST00000600097 RALGPS1Q5JS13 557 aa17.15■□□□□ 0.34
SMG9-210ENST00000600097 DENND2CQ68D51 928 aa17.15■□□□□ 0.34
SMG9-210ENST00000600097 RAET1GQ6H3X3 334 aa17.15■□□□□ 0.34
SMG9-210ENST00000600097 BORAQ6PGQ7 559 aa17.15■□□□□ 0.34
SMG9-210ENST00000600097 IRF2BP2Q7Z5L9 587 aa17.15■□□□□ 0.34
SMG9-210ENST00000600097 NAGSQ8N159 534 aa17.15■□□□□ 0.34
SMG9-210ENST00000600097 IL22RA1Q8N6P7 574 aa17.15■□□□□ 0.34
SMG9-210ENST00000600097 JPH3Q8WXH2 748 aaPredicted RBP17.15■□□□□ 0.34
SMG9-210ENST00000600097 SCRN2Q96FV2 425 aa17.15■□□□□ 0.34
SMG9-210ENST00000600097 SYT11Q9BT88 431 aa17.15■□□□□ 0.34
SMG9-210ENST00000600097 DDA1Q9BW61 102 aa17.15■□□□□ 0.34
SMG9-210ENST00000600097 SLC12A9Q9BXP2 914 aa17.15■□□□□ 0.34
SMG9-210ENST00000600097 ASPSCR1Q9BZE9 553 aa17.15■□□□□ 0.34
SMG9-210ENST00000600097 MYO6Q9UM54 1294 aa17.15■□□□□ 0.34
SMG9-210ENST00000600097 GOLGA6CA6NDK9 693 aa17.14■□□□□ 0.33
SMG9-210ENST00000600097 GOLGA6BA6NDN3 693 aa17.14■□□□□ 0.33
SMG9-210ENST00000600097 TMCO5BA8MYB1 307 aa17.14■□□□□ 0.33
SMG9-210ENST00000600097 GOLGA6DP0CG33 693 aa17.14■□□□□ 0.33
SMG9-210ENST00000600097 ADCY8P40145 1251 aa17.14■□□□□ 0.33
SMG9-210ENST00000600097 GPLD1P80108 840 aa17.14■□□□□ 0.33
SMG9-210ENST00000600097 DPTQ07507 201 aa17.14■□□□□ 0.33
SMG9-210ENST00000600097 CLCA4Q14CN2 919 aa17.14■□□□□ 0.33
SMG9-210ENST00000600097 Q6ZVL8 140 aa17.14■□□□□ 0.33
SMG9-210ENST00000600097 CYP4V2Q6ZWL3 525 aaPredicted RBP17.14■□□□□ 0.33
SMG9-210ENST00000600097 USP45Q70EL2 814 aa17.14■□□□□ 0.33
SMG9-210ENST00000600097 HSD11B1LQ7Z5J1 315 aa17.14■□□□□ 0.33
SMG9-210ENST00000600097 PATE1Q8WXA2 126 aa17.14■□□□□ 0.33
SMG9-210ENST00000600097 ART4Q93070 314 aa17.14■□□□□ 0.33
SMG9-210ENST00000600097 MGME1Q9BQP7 344 aa17.14■□□□□ 0.33
SMG9-210ENST00000600097 NOD2Q9HC29 1040 aa17.14■□□□□ 0.33
SMG9-210ENST00000600097 GOLGA6AQ9NYA3 693 aa17.14■□□□□ 0.33
SMG9-210ENST00000600097 IGHV1OR21-1A0A087WYE8 117 aa17.13■□□□□ 0.33
SMG9-210ENST00000600097 TTC24A2A3L6 582 aaPredicted RBP17.13■□□□□ 0.33
SMG9-210ENST00000600097 H3BRJ5 948 aa17.13■□□□□ 0.33
SMG9-210ENST00000600097 PPM1DO15297 605 aa17.13■□□□□ 0.33
SMG9-210ENST00000600097 ATMINO43313 823 aaPredicted RBP17.13■□□□□ 0.33
SMG9-210ENST00000600097 LRCH4O75427 683 aa17.13■□□□□ 0.33
SMG9-210ENST00000600097 PEX11BO96011 259 aa17.13■□□□□ 0.33
SMG9-210ENST00000600097 THRAP10827 490 aa17.13■□□□□ 0.33
SMG9-210ENST00000600097 LHCGRP22888 699 aa17.13■□□□□ 0.33
SMG9-210ENST00000600097 UGT1A3P35503 534 aa17.13■□□□□ 0.33
SMG9-210ENST00000600097 ARL4AP40617 200 aa17.13■□□□□ 0.33
SMG9-210ENST00000600097 ACTR1BP42025 376 aa17.13■□□□□ 0.33
SMG9-210ENST00000600097 ARSDP51689 593 aa17.13■□□□□ 0.33
SMG9-210ENST00000600097 ACTR1AP61163 376 aa17.13■□□□□ 0.33
SMG9-210ENST00000600097 TMCO3Q6UWJ1 677 aa17.13■□□□□ 0.33
SMG9-210ENST00000600097 RBM43Q6ZSC3 357 aaKnown RBP17.13■□□□□ 0.33
SMG9-210ENST00000600097 TP53INP2Q8IXH6 220 aa17.13■□□□□ 0.33
SMG9-210ENST00000600097 NSMCE1Q8WV22 266 aa17.13■□□□□ 0.33
SMG9-210ENST00000600097 SCARF2Q96GP6 870 aaPredicted RBP17.13■□□□□ 0.33
SMG9-210ENST00000600097 OR2M4Q96R27 311 aa17.13■□□□□ 0.33
SMG9-210ENST00000600097 MCCC1Q96RQ3 725 aaPredicted RBP17.13■□□□□ 0.33
SMG9-210ENST00000600097 ANO10Q9NW15 660 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms