RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 PPP2R5EQ16537 467 aa14.13□□□□□ -0.15
LIG1-218ENST00000599322 ALG11Q2TAA5 492 aa14.13□□□□□ -0.15
LIG1-218ENST00000599322 TEX44Q53QW1 395 aa14.13□□□□□ -0.15
LIG1-218ENST00000599322 HES3Q5TGS1 186 aa14.13□□□□□ -0.15
LIG1-218ENST00000599322 LRRC66Q68CR7 880 aa14.13□□□□□ -0.15
LIG1-218ENST00000599322 CRTC1Q6UUV9 634 aa14.13□□□□□ -0.15
LIG1-218ENST00000599322 Q6ZVL8 140 aa14.13□□□□□ -0.15
LIG1-218ENST00000599322 HSD11B1LQ7Z5J1 315 aa14.13□□□□□ -0.15
LIG1-218ENST00000599322 TAF8Q7Z7C8 310 aa14.13□□□□□ -0.15
LIG1-218ENST00000599322 PLA2G15Q8NCC3 412 aa14.13□□□□□ -0.15
LIG1-218ENST00000599322 OR6C4Q8NGE1 309 aa14.13□□□□□ -0.15
LIG1-218ENST00000599322 WDR48Q8TAF3 677 aa14.13□□□□□ -0.15
LIG1-218ENST00000599322 ARRDC2Q8TBH0 407 aa14.13□□□□□ -0.15
LIG1-218ENST00000599322 MAPK15Q8TD08 544 aa14.13□□□□□ -0.15
LIG1-218ENST00000599322 LRRN4Q8WUT4 740 aa14.13□□□□□ -0.15
LIG1-218ENST00000599322 FUBP1Q96AE4 644 aaKnown RBP14.13□□□□□ -0.15
LIG1-218ENST00000599322 OLFM3Q96PB7 478 aa14.13□□□□□ -0.15
LIG1-218ENST00000599322 LRRC61Q9BV99 259 aa14.13□□□□□ -0.15
LIG1-218ENST00000599322 CYP4F12Q9HCS2 524 aa14.13□□□□□ -0.15
LIG1-218ENST00000599322 KLHL8Q9P2G9 620 aaPredicted RBP14.13□□□□□ -0.15
LIG1-218ENST00000599322 KLF15Q9UIH9 416 aa14.13□□□□□ -0.15
LIG1-218ENST00000599322 CLCA2Q9UQC9 943 aa14.13□□□□□ -0.15
LIG1-218ENST00000599322 PCDHA3Q9Y5H8 950 aa14.13□□□□□ -0.15
LIG1-218ENST00000599322 DGKBQ9Y6T7 804 aa14.13□□□□□ -0.15
LIG1-218ENST00000599322 ANKRD11Q6UB99 2663 aaPredicted RBP14.13□□□□□ -0.15
LIG1-218ENST00000599322 BAHCC1Q9P281 2608 aa14.12□□□□□ -0.15
LIG1-218ENST00000599322 LAMA5O15230 3695 aa14.12□□□□□ -0.15
LIG1-218ENST00000599322 hCG_1818297A0A087WSY0 165 aa14.12□□□□□ -0.15
LIG1-218ENST00000599322 C1orf232A0A0U1RR37 186 aa14.12□□□□□ -0.15
LIG1-218ENST00000599322 MACROD2A1Z1Q3 448 aa14.12□□□□□ -0.15
LIG1-218ENST00000599322 RGSL1A5PLK6 1076 aa14.12□□□□□ -0.15
LIG1-218ENST00000599322 YY2O15391 372 aa14.12□□□□□ -0.15
LIG1-218ENST00000599322 ZW10O43264 779 aa14.12□□□□□ -0.15
LIG1-218ENST00000599322 TJP3O95049 919 aa14.12□□□□□ -0.15
LIG1-218ENST00000599322 TEAD1P28347 426 aa14.12□□□□□ -0.15
LIG1-218ENST00000599322 CTNNA1P35221 906 aaKnown RBP14.12□□□□□ -0.15
LIG1-218ENST00000599322 DPTQ07507 201 aa14.12□□□□□ -0.15
LIG1-218ENST00000599322 NIPAL4Q0D2K0 466 aa14.12□□□□□ -0.15
LIG1-218ENST00000599322 LLGL1Q15334 1064 aa14.12□□□□□ -0.15
LIG1-218ENST00000599322 SLC14A2Q15849 920 aa14.12□□□□□ -0.15
LIG1-218ENST00000599322 TPRG1LQ5T0D9 272 aa14.12□□□□□ -0.15
LIG1-218ENST00000599322 C6orf132Q5T0Z8 1188 aa14.12□□□□□ -0.15
LIG1-218ENST00000599322 RAD9BQ6WBX8 426 aa14.12□□□□□ -0.15
LIG1-218ENST00000599322 KDM7AQ6ZMT4 941 aa14.12□□□□□ -0.15
LIG1-218ENST00000599322 ZNF765Q7L2R6 523 aa14.12□□□□□ -0.15
LIG1-218ENST00000599322 PID1Q7Z2X4 250 aa14.12□□□□□ -0.15
LIG1-218ENST00000599322 EFL1Q7Z2Z2 1120 aaKnown RBP14.12□□□□□ -0.15
LIG1-218ENST00000599322 PEX26Q7Z412 305 aa14.12□□□□□ -0.15
LIG1-218ENST00000599322 ZC3H18Q86VM9 953 aaKnown RBP14.12□□□□□ -0.15
LIG1-218ENST00000599322 NLRP8Q86W28 1048 aa14.12□□□□□ -0.15
LIG1-218ENST00000599322 HEATR4Q86WZ0 1026 aa14.12□□□□□ -0.15
LIG1-218ENST00000599322 PROSER1Q86XN7 944 aa14.12□□□□□ -0.15
LIG1-218ENST00000599322 CACTIN-AS1Q8N1I8 211 aa14.12□□□□□ -0.15
LIG1-218ENST00000599322 ACRBPQ8NEB7 543 aa14.12□□□□□ -0.15
LIG1-218ENST00000599322 IFI44Q8TCB0 444 aa14.12□□□□□ -0.15
LIG1-218ENST00000599322 UBE2Q2Q8WVN8 375 aa14.12□□□□□ -0.15
LIG1-218ENST00000599322 NSMCE3Q96MG7 304 aa14.12□□□□□ -0.15
LIG1-218ENST00000599322 DEPDC7Q96QD5 511 aa14.12□□□□□ -0.15
LIG1-218ENST00000599322 RBM15Q96T37 977 aaKnown RBP eCLIP14.12□□□□□ -0.15
LIG1-218ENST00000599322 HEMGNQ9BXL5 484 aa14.12□□□□□ -0.15
LIG1-218ENST00000599322 CEP41Q9BYV8 373 aa14.12□□□□□ -0.15
LIG1-218ENST00000599322 TSGA10Q9BZW7 698 aa14.12□□□□□ -0.15
LIG1-218ENST00000599322 GOLPH3Q9H4A6 298 aa14.12□□□□□ -0.15
LIG1-218ENST00000599322 GLOD4Q9HC38 313 aa14.12□□□□□ -0.15
LIG1-218ENST00000599322 TRHDEQ9UKU6 1024 aa14.12□□□□□ -0.15
LIG1-218ENST00000599322 PADI4Q9UM07 663 aa14.12□□□□□ -0.15
LIG1-218ENST00000599322 TFR2Q9UP52 801 aa14.12□□□□□ -0.15
LIG1-218ENST00000599322 GPR34Q9UPC5 381 aa14.12□□□□□ -0.15
LIG1-218ENST00000599322 EFR3BQ9Y2G0 817 aa14.12□□□□□ -0.15
LIG1-218ENST00000599322 ANKRD36A6QL64 1941 aa14.11□□□□□ -0.15
LIG1-218ENST00000599322 GOLGA4Q13439 2230 aaKnown RBP14.11□□□□□ -0.15
LIG1-218ENST00000599322 FAM149AA5PLN7 773 aa14.11□□□□□ -0.15
LIG1-218ENST00000599322 TRABD2BA6NFA1 517 aa14.11□□□□□ -0.15
LIG1-218ENST00000599322 MIF4GDA9UHW6 222 aaKnown RBP14.11□□□□□ -0.15
LIG1-218ENST00000599322 APOC4-APOC2K7ER74 178 aa14.11□□□□□ -0.15
LIG1-218ENST00000599322 PJA2O43164 708 aa14.11□□□□□ -0.15
LIG1-218ENST00000599322 GCATO75600 419 aa14.11□□□□□ -0.15
LIG1-218ENST00000599322 ASMTLO95671 621 aa14.11□□□□□ -0.15
LIG1-218ENST00000599322 MT-CO3P00414 261 aa14.11□□□□□ -0.15
LIG1-218ENST00000599322 APOC2P02655 101 aa14.11□□□□□ -0.15
LIG1-218ENST00000599322 LHCGRP22888 699 aa14.11□□□□□ -0.15
LIG1-218ENST00000599322 SKOR1P84550 965 aa14.11□□□□□ -0.15
LIG1-218ENST00000599322 CDK18Q07002 472 aa14.11□□□□□ -0.15
LIG1-218ENST00000599322 ILF3Q12906 894 aaKnown RBP eCLIP14.11□□□□□ -0.15
LIG1-218ENST00000599322 ZBTB17Q13105 803 aa14.11□□□□□ -0.15
LIG1-218ENST00000599322 TARDBPQ13148 414 aaKnown RBP eCLIP14.11□□□□□ -0.15
LIG1-218ENST00000599322 XRCC4Q13426 336 aa14.11□□□□□ -0.15
LIG1-218ENST00000599322 ITPR1Q14643 2758 aa14.11□□□□□ -0.15
LIG1-218ENST00000599322 PCSK7Q16549 785 aa14.11□□□□□ -0.15
LIG1-218ENST00000599322 TAZQ16635 292 aa14.11□□□□□ -0.15
LIG1-218ENST00000599322 CDKN3Q16667 212 aa14.11□□□□□ -0.15
LIG1-218ENST00000599322 ITPRIPL1Q6GPH6 555 aa14.11□□□□□ -0.15
LIG1-218ENST00000599322 BBS12Q6ZW61 710 aa14.11□□□□□ -0.15
LIG1-218ENST00000599322 TSPAN33Q86UF1 283 aa14.11□□□□□ -0.15
LIG1-218ENST00000599322 ARL10Q8N8L6 244 aa14.11□□□□□ -0.15
LIG1-218ENST00000599322 FAM46DQ8NEK8 389 aa14.11□□□□□ -0.15
LIG1-218ENST00000599322 HTR3CQ8WXA8 447 aa14.11□□□□□ -0.15
LIG1-218ENST00000599322 NXPE2Q96DL1 559 aa14.11□□□□□ -0.15
LIG1-218ENST00000599322 IMP4Q96G21 291 aaKnown RBP14.11□□□□□ -0.15
LIG1-218ENST00000599322 TEKT5Q96M29 485 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms