RNA–Protein interactions for RNA: ENST00000596842.5

UPF1-204, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 2

Gene UPF1, Length 3,825 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-204ENST00000596842 ANKDD1AQ495B1 522 aa15.26■□□□□ 0.03
UPF1-204ENST00000596842 C6orf10Q5SRN2 563 aa15.26■□□□□ 0.03
UPF1-204ENST00000596842 RAB44Q7Z6P3 723 aaPredicted RBP15.26■□□□□ 0.03
UPF1-204ENST00000596842 EXOC2Q96KP1 924 aa15.26■□□□□ 0.03
UPF1-204ENST00000596842 EVLQ9UI08 416 aaPredicted RBP15.26■□□□□ 0.03
UPF1-204ENST00000596842 ARL5AQ9Y689 179 aa15.26■□□□□ 0.03
UPF1-204ENST00000596842 M0QZ92 97 aa15.26■□□□□ 0.03
UPF1-204ENST00000596842 TBX18O95935 607 aa15.26■□□□□ 0.03
UPF1-204ENST00000596842 CCNCP24863 283 aa15.26■□□□□ 0.03
UPF1-204ENST00000596842 ADSLP30566 484 aaPredicted RBP15.26■□□□□ 0.03
UPF1-204ENST00000596842 APOFQ13790 326 aa15.26■□□□□ 0.03
UPF1-204ENST00000596842 INPP5AQ14642 412 aa15.26■□□□□ 0.03
UPF1-204ENST00000596842 KLHL35Q6PF15 583 aa15.26■□□□□ 0.03
UPF1-204ENST00000596842 TMEM207Q6UWW9 146 aa15.26■□□□□ 0.03
UPF1-204ENST00000596842 RALGPS2Q86X27 583 aaPredicted RBP15.26■□□□□ 0.03
UPF1-204ENST00000596842 FUNDC1Q8IVP5 155 aa15.26■□□□□ 0.03
UPF1-204ENST00000596842 NUDT8Q8WV74 236 aa15.26■□□□□ 0.03
UPF1-204ENST00000596842 TWIST2Q8WVJ9 160 aa15.26■□□□□ 0.03
UPF1-204ENST00000596842 PTERQ96BW5 349 aa15.26■□□□□ 0.03
UPF1-204ENST00000596842 ADI1Q9BV57 179 aa15.26■□□□□ 0.03
UPF1-204ENST00000596842 ADNPQ9H2P0 1102 aa15.26■□□□□ 0.03
UPF1-204ENST00000596842 GOLGA8CPA6NN73 597 aa15.25■□□□□ 0.03
UPF1-204ENST00000596842 B4GAT1O43505 415 aa15.25■□□□□ 0.03
UPF1-204ENST00000596842 HAPLN1P10915 354 aaPredicted RBP15.25■□□□□ 0.03
UPF1-204ENST00000596842 KCNE1P15382 129 aa15.25■□□□□ 0.03
UPF1-204ENST00000596842 CAPN3P20807 821 aa15.25■□□□□ 0.03
UPF1-204ENST00000596842 PCSK1P29120 753 aa15.25■□□□□ 0.03
UPF1-204ENST00000596842 MARC1Q5VT66 337 aa15.25■□□□□ 0.03
UPF1-204ENST00000596842 HEATR4Q86WZ0 1026 aa15.25■□□□□ 0.03
UPF1-204ENST00000596842 OR13C4Q8NGS5 318 aa15.25■□□□□ 0.03
UPF1-204ENST00000596842 PSMG2Q969U7 264 aa15.25■□□□□ 0.03
UPF1-204ENST00000596842 ZNF597Q96LX8 424 aa15.25■□□□□ 0.03
UPF1-204ENST00000596842 RNF145Q96MT1 663 aa15.25■□□□□ 0.03
UPF1-204ENST00000596842 CORO1BQ9BR76 489 aa15.25■□□□□ 0.03
UPF1-204ENST00000596842 TRNAU1APQ9NX07 287 aaKnown RBP15.25■□□□□ 0.03
UPF1-204ENST00000596842 DNAJC15Q9Y5T4 150 aa15.25■□□□□ 0.03
UPF1-204ENST00000596842 PAPPA2Q9BXP8 1791 aa15.25■□□□□ 0.03
UPF1-204ENST00000596842 ZBBXA8MT70 800 aa15.25■□□□□ 0.03
UPF1-204ENST00000596842 AP3B1O00203 1094 aa15.25■□□□□ 0.03
UPF1-204ENST00000596842 GMNNO75496 209 aa15.25■□□□□ 0.03
UPF1-204ENST00000596842 SCAPQ12770 1279 aa15.25■□□□□ 0.03
UPF1-204ENST00000596842 METTL23Q86XA0 190 aa15.25■□□□□ 0.03
UPF1-204ENST00000596842 PELI3Q8N2H9 469 aa15.25■□□□□ 0.03
UPF1-204ENST00000596842 ACOX2Q99424 681 aa15.25■□□□□ 0.03
UPF1-204ENST00000596842 EPB41L1Q9H4G0 881 aa15.25■□□□□ 0.03
UPF1-204ENST00000596842 ST3GAL5Q9UNP4 418 aa15.25■□□□□ 0.03
UPF1-204ENST00000596842 A0A1B0GTL3 188 aa15.25■□□□□ 0.03
UPF1-204ENST00000596842 A0A1W2PPW3 197 aa15.25■□□□□ 0.03
UPF1-204ENST00000596842 CNTN5O94779 1100 aa15.25■□□□□ 0.03
UPF1-204ENST00000596842 EFEMP1Q12805 493 aa15.25■□□□□ 0.03
UPF1-204ENST00000596842 RFTN1Q14699 578 aaPredicted RBP15.25■□□□□ 0.03
UPF1-204ENST00000596842 TIGD2Q4W5G0 525 aa15.25■□□□□ 0.03
UPF1-204ENST00000596842 MIER2Q8N344 545 aa15.25■□□□□ 0.03
UPF1-204ENST00000596842 C12orf43Q96C57 262 aaKnown RBP15.25■□□□□ 0.03
UPF1-204ENST00000596842 TSPAN17Q96FV3 270 aa15.25■□□□□ 0.03
UPF1-204ENST00000596842 HMCESQ96FZ2 354 aa15.25■□□□□ 0.03
UPF1-204ENST00000596842 FAR2Q96K12 515 aa15.25■□□□□ 0.03
UPF1-204ENST00000596842 NAA50Q9GZZ1 169 aaKnown RBP15.25■□□□□ 0.03
UPF1-204ENST00000596842 GSTO2Q9H4Y5 243 aa15.25■□□□□ 0.03
UPF1-204ENST00000596842 VPS28Q9UK41 221 aa15.25■□□□□ 0.03
UPF1-204ENST00000596842 SMIM35A0A1B0GVV1 85 aa15.24■□□□□ 0.03
UPF1-204ENST00000596842 E9PAM4 449 aa15.24■□□□□ 0.03
UPF1-204ENST00000596842 OCM2P0CE71 109 aa15.24■□□□□ 0.03
UPF1-204ENST00000596842 OCMP0CE72 109 aaPredicted RBP15.24■□□□□ 0.03
UPF1-204ENST00000596842 FMO4P31512 558 aa15.24■□□□□ 0.03
UPF1-204ENST00000596842 PSEN2P49810 448 aa15.24■□□□□ 0.03
UPF1-204ENST00000596842 DDR2Q16832 855 aa15.24■□□□□ 0.03
UPF1-204ENST00000596842 TMEM26Q6ZUK4 368 aa15.24■□□□□ 0.03
UPF1-204ENST00000596842 LRRTM3Q86VH5 581 aa15.24■□□□□ 0.03
UPF1-204ENST00000596842 CALML6Q8TD86 181 aa15.24■□□□□ 0.03
UPF1-204ENST00000596842 CCDC126Q96EE4 140 aa15.24■□□□□ 0.03
UPF1-204ENST00000596842 SLAMF8Q9P0V8 285 aa15.24■□□□□ 0.03
UPF1-204ENST00000596842 A0A0U1RQS6 177 aa15.24■□□□□ 0.03
UPF1-204ENST00000596842 BTBD19C9JJ37 291 aa15.24■□□□□ 0.03
UPF1-204ENST00000596842 KPNA6O60684 536 aa15.24■□□□□ 0.03
UPF1-204ENST00000596842 KRT75O95678 551 aa15.24■□□□□ 0.03
UPF1-204ENST00000596842 RPL26P61254 145 aaKnown RBP15.24■□□□□ 0.03
UPF1-204ENST00000596842 RBBP7Q16576 425 aa15.24■□□□□ 0.03
UPF1-204ENST00000596842 RIN3Q8TB24 985 aa15.24■□□□□ 0.03
UPF1-204ENST00000596842 CCDC68Q9H2F9 335 aa15.24■□□□□ 0.03
UPF1-204ENST00000596842 MEAF6Q9HAF1 191 aa15.24■□□□□ 0.03
UPF1-204ENST00000596842 FAM105AQ9NUU6 356 aa15.24■□□□□ 0.03
UPF1-204ENST00000596842 ACTL7AQ9Y615 435 aa15.24■□□□□ 0.03
UPF1-204ENST00000596842 LTBP3Q9NS15 1303 aa15.24■□□□□ 0.03
UPF1-204ENST00000596842 ENPP3O14638 875 aa15.24■□□□□ 0.03
UPF1-204ENST00000596842 TRIM24O15164 1050 aa15.24■□□□□ 0.03
UPF1-204ENST00000596842 SLC22A2O15244 555 aa15.24■□□□□ 0.03
UPF1-204ENST00000596842 HOXD12P35452 270 aa15.24■□□□□ 0.03
UPF1-204ENST00000596842 HCAR3P49019 387 aa15.24■□□□□ 0.03
UPF1-204ENST00000596842 HK2P52789 917 aa15.24■□□□□ 0.03
UPF1-204ENST00000596842 PFKPQ01813 784 aa15.24■□□□□ 0.03
UPF1-204ENST00000596842 LDLRAP1Q5SW96 308 aa15.24■□□□□ 0.03
UPF1-204ENST00000596842 THOC7Q6I9Y2 204 aaKnown RBP15.24■□□□□ 0.03
UPF1-204ENST00000596842 KIAA0930Q6ICG6 404 aaPredicted RBP15.24■□□□□ 0.03
UPF1-204ENST00000596842 SPATA2LQ8IUW3 424 aaPredicted RBP15.24■□□□□ 0.03
UPF1-204ENST00000596842 MAELQ96JY0 434 aaKnown RBP15.24■□□□□ 0.03
UPF1-204ENST00000596842 SMIM14Q96QK8 99 aa15.24■□□□□ 0.03
UPF1-204ENST00000596842 ING2Q9H160 280 aa15.24■□□□□ 0.03
UPF1-204ENST00000596842 AGO3Q9H9G7 860 aaKnown RBP15.24■□□□□ 0.03
UPF1-204ENST00000596842 TBC1D23Q9NUY8 699 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms