RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 CRTC1Q6UUV9 634 aa15.17■□□□□ 0.02
VRK3-207ENST00000594092 DCLK2Q8N568 766 aa15.17■□□□□ 0.02
VRK3-207ENST00000594092 OTUD6BQ8N6M0 293 aa15.17■□□□□ 0.02
VRK3-207ENST00000594092 PNPLA1Q8N8W4 532 aa15.17■□□□□ 0.02
VRK3-207ENST00000594092 GPR150Q8NGU9 434 aa15.17■□□□□ 0.02
VRK3-207ENST00000594092 GDAP1Q8TB36 358 aa15.17■□□□□ 0.02
VRK3-207ENST00000594092 HCAR2Q8TDS4 363 aa15.17■□□□□ 0.02
VRK3-207ENST00000594092 DENND1AQ8TEH3 1009 aa15.17■□□□□ 0.02
VRK3-207ENST00000594092 OR8D1Q8WZ84 308 aa15.17■□□□□ 0.02
VRK3-207ENST00000594092 DNASE1L2Q92874 299 aa15.17■□□□□ 0.02
VRK3-207ENST00000594092 VPS39Q96JC1 886 aa15.17■□□□□ 0.02
VRK3-207ENST00000594092 FAM129BQ96TA1 746 aa15.17■□□□□ 0.02
VRK3-207ENST00000594092 FBXO6Q9NRD1 293 aaPredicted RBP15.17■□□□□ 0.02
VRK3-207ENST00000594092 HEBP1Q9NRV9 189 aa15.17■□□□□ 0.02
VRK3-207ENST00000594092 CATSPERZQ9NTU4 200 aa15.17■□□□□ 0.02
VRK3-207ENST00000594092 DKK3Q9UBP4 350 aa15.17■□□□□ 0.02
VRK3-207ENST00000594092 SUN2Q9UH99 717 aa15.17■□□□□ 0.02
VRK3-207ENST00000594092 MTO1Q9Y2Z2 717 aaKnown RBP15.17■□□□□ 0.02
VRK3-207ENST00000594092 PIAS3Q9Y6X2 628 aa15.17■□□□□ 0.02
VRK3-207ENST00000594092 H7C0S8 307 aa15.17■□□□□ 0.02
VRK3-207ENST00000594092 COPEO14579 308 aa15.17■□□□□ 0.02
VRK3-207ENST00000594092 CD3EAPO15446 510 aaKnown RBP15.17■□□□□ 0.02
VRK3-207ENST00000594092 ALDOAP04075 364 aaKnown RBP15.17■□□□□ 0.02
VRK3-207ENST00000594092 EPHX1P07099 455 aa15.17■□□□□ 0.02
VRK3-207ENST00000594092 TIMP2P16035 220 aa15.17■□□□□ 0.02
VRK3-207ENST00000594092 CCNFP41002 786 aa15.17■□□□□ 0.02
VRK3-207ENST00000594092 KIR2DL1P43626 348 aaPredicted RBP15.17■□□□□ 0.02
VRK3-207ENST00000594092 SEC24CP53992 1094 aa15.17■□□□□ 0.02
VRK3-207ENST00000594092 ENPP2Q13822 863 aa15.17■□□□□ 0.02
VRK3-207ENST00000594092 POM121L1PQ3SYA9 428 aa15.17■□□□□ 0.02
VRK3-207ENST00000594092 GALNT7Q86SF2 657 aa15.17■□□□□ 0.02
VRK3-207ENST00000594092 LDB1Q86U70 411 aaPredicted RBP15.17■□□□□ 0.02
VRK3-207ENST00000594092 RALGPS2Q86X27 583 aaPredicted RBP15.17■□□□□ 0.02
VRK3-207ENST00000594092 ZNF513Q8N8E2 541 aaPredicted RBP15.17■□□□□ 0.02
VRK3-207ENST00000594092 TMIEQ8NEW7 156 aa15.17■□□□□ 0.02
VRK3-207ENST00000594092 TCP10LQ8TDR4 215 aa15.17■□□□□ 0.02
VRK3-207ENST00000594092 PAIP2Q9BPZ3 127 aaKnown RBP15.17■□□□□ 0.02
VRK3-207ENST00000594092 C19orf43Q9BQ61 176 aa15.17■□□□□ 0.02
VRK3-207ENST00000594092 IQCGQ9H095 443 aaKnown RBP15.17■□□□□ 0.02
VRK3-207ENST00000594092 RABEP2Q9H5N1 569 aa15.17■□□□□ 0.02
VRK3-207ENST00000594092 C8orf33Q9H7E9 229 aaPredicted RBP15.17■□□□□ 0.02
VRK3-207ENST00000594092 B4GALT6Q9UBX8 382 aa15.17■□□□□ 0.02
VRK3-207ENST00000594092 PPM1HQ9ULR3 514 aa15.17■□□□□ 0.02
VRK3-207ENST00000594092 STON1Q9Y6Q2 735 aa15.17■□□□□ 0.02
VRK3-207ENST00000594092 C16orf96A6NNT2 1141 aa15.16■□□□□ 0.02
VRK3-207ENST00000594092 UPK3BL1B0FP48 263 aa15.16■□□□□ 0.02
VRK3-207ENST00000594092 UPK3BL2E5RIL1 263 aa15.16■□□□□ 0.02
VRK3-207ENST00000594092 KPNA3O00505 521 aaPredicted RBP15.16■□□□□ 0.02
VRK3-207ENST00000594092 TPP1O14773 563 aa15.16■□□□□ 0.02
VRK3-207ENST00000594092 HAUS5O94927 633 aa15.16■□□□□ 0.02
VRK3-207ENST00000594092 ASMTLO95671 621 aa15.16■□□□□ 0.02
VRK3-207ENST00000594092 PRSS56P0CW18 603 aa15.16■□□□□ 0.02
VRK3-207ENST00000594092 LHCGRP22888 699 aa15.16■□□□□ 0.02
VRK3-207ENST00000594092 FOXN2P32314 431 aa15.16■□□□□ 0.02
VRK3-207ENST00000594092 LEPRP48357 1165 aaKnown RBP15.16■□□□□ 0.02
VRK3-207ENST00000594092 CD151P48509 253 aa15.16■□□□□ 0.02
VRK3-207ENST00000594092 PEX6Q13608 980 aa15.16■□□□□ 0.02
VRK3-207ENST00000594092 SEMA3AQ14563 771 aa15.16■□□□□ 0.02
VRK3-207ENST00000594092 ZNF789Q5FWF6 425 aa15.16■□□□□ 0.02
VRK3-207ENST00000594092 HHATQ5VTY9 493 aa15.16■□□□□ 0.02
VRK3-207ENST00000594092 LRRC66Q68CR7 880 aa15.16■□□□□ 0.02
VRK3-207ENST00000594092 PTCRAQ6ISU1 281 aaPredicted RBP15.16■□□□□ 0.02
VRK3-207ENST00000594092 MRNIPQ6NTE8 343 aa15.16■□□□□ 0.02
VRK3-207ENST00000594092 ACVR1CQ8NER5 493 aa15.16■□□□□ 0.02
VRK3-207ENST00000594092 PIP4K2CQ8TBX8 421 aa15.16■□□□□ 0.02
VRK3-207ENST00000594092 ACMSDQ8TDX5 336 aa15.16■□□□□ 0.02
VRK3-207ENST00000594092 CKAP2Q8WWK9 683 aa15.16■□□□□ 0.02
VRK3-207ENST00000594092 ISL2Q96A47 359 aa15.16■□□□□ 0.02
VRK3-207ENST00000594092 CHMP6Q96FZ7 201 aa15.16■□□□□ 0.02
VRK3-207ENST00000594092 GPR22Q99680 433 aa15.16■□□□□ 0.02
VRK3-207ENST00000594092 PRSS16Q9NQE7 514 aa15.16■□□□□ 0.02
VRK3-207ENST00000594092 MKS1Q9NXB0 559 aa15.16■□□□□ 0.02
VRK3-207ENST00000594092 MYO10Q9HD67 2058 aa15.16■□□□□ 0.02
VRK3-207ENST00000594092 NDUFAB1O14561 156 aa15.15■□□□□ 0.02
VRK3-207ENST00000594092 NPC1O15118 1278 aa15.15■□□□□ 0.02
VRK3-207ENST00000594092 NARSO43776 548 aaKnown RBP15.15■□□□□ 0.02
VRK3-207ENST00000594092 S1PR4O95977 384 aa15.15■□□□□ 0.02
VRK3-207ENST00000594092 FAM107AO95990 144 aa15.15■□□□□ 0.02
VRK3-207ENST00000594092 CHRM1P11229 460 aaPredicted RBP15.15■□□□□ 0.02
VRK3-207ENST00000594092 OGNP20774 298 aaKnown RBP15.15■□□□□ 0.02
VRK3-207ENST00000594092 MC4RP32245 332 aa15.15■□□□□ 0.02
VRK3-207ENST00000594092 WASP42768 502 aa15.15■□□□□ 0.02
VRK3-207ENST00000594092 NEK3P51956 506 aa15.15■□□□□ 0.02
VRK3-207ENST00000594092 METAP1P53582 386 aa15.15■□□□□ 0.02
VRK3-207ENST00000594092 SEC13P55735 322 aa15.15■□□□□ 0.02
VRK3-207ENST00000594092 WDR4P57081 412 aaKnown RBP15.15■□□□□ 0.02
VRK3-207ENST00000594092 XIAPP98170 497 aa15.15■□□□□ 0.02
VRK3-207ENST00000594092 PON2Q15165 354 aa15.15■□□□□ 0.02
VRK3-207ENST00000594092 IER5LQ5T953 404 aa15.15■□□□□ 0.02
VRK3-207ENST00000594092 CNSTQ6PJW8 725 aa15.15■□□□□ 0.02
VRK3-207ENST00000594092 LVRNQ6Q4G3 990 aa15.15■□□□□ 0.02
VRK3-207ENST00000594092 PARS2Q7L3T8 475 aaKnown RBP15.15■□□□□ 0.02
VRK3-207ENST00000594092 TTC7BQ86TV6 843 aa15.15■□□□□ 0.02
VRK3-207ENST00000594092 CHPFQ8IZ52 775 aa15.15■□□□□ 0.02
VRK3-207ENST00000594092 MAGEB18Q96M61 343 aa15.15■□□□□ 0.02
VRK3-207ENST00000594092 PCDH12Q9NPG4 1184 aa15.15■□□□□ 0.02
VRK3-207ENST00000594092 PCMTD2Q9NV79 361 aa15.15■□□□□ 0.02
VRK3-207ENST00000594092 FNDC3AQ9Y2H6 1198 aaKnown RBP15.15■□□□□ 0.02
VRK3-207ENST00000594092 SCN8AQ9UQD0 1980 aa15.15■□□□□ 0.02
VRK3-207ENST00000594092 CYP2A6P11509 494 aaPredicted RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms