RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 ABCG8Q9H221 673 aa14.54□□□□□ -0.08
VRK3-206ENST00000594090 MAGEE1Q9HCI5 957 aa14.54□□□□□ -0.08
VRK3-206ENST00000594090 KNL1Q8NG31 2342 aa14.54□□□□□ -0.08
VRK3-206ENST00000594090 GOLGA6CA6NDK9 693 aa14.53□□□□□ -0.08
VRK3-206ENST00000594090 GOLGA6BA6NDN3 693 aa14.53□□□□□ -0.08
VRK3-206ENST00000594090 CACNB4O00305 520 aaPredicted RBP14.53□□□□□ -0.08
VRK3-206ENST00000594090 EPOP01588 193 aa14.53□□□□□ -0.08
VRK3-206ENST00000594090 HOXC4P09017 264 aaPredicted RBP14.53□□□□□ -0.08
VRK3-206ENST00000594090 ATXN1LP0C7T5 689 aaKnown RBP14.53□□□□□ -0.08
VRK3-206ENST00000594090 PIRTP0C851 137 aa14.53□□□□□ -0.08
VRK3-206ENST00000594090 GOLGA6DP0CG33 693 aa14.53□□□□□ -0.08
VRK3-206ENST00000594090 TEAD1P28347 426 aa14.53□□□□□ -0.08
VRK3-206ENST00000594090 TNNT3P45378 269 aaPredicted RBP14.53□□□□□ -0.08
VRK3-206ENST00000594090 SPINT3P49223 89 aa14.53□□□□□ -0.08
VRK3-206ENST00000594090 GEMP55040 296 aa14.53□□□□□ -0.08
VRK3-206ENST00000594090 DPTQ07507 201 aa14.53□□□□□ -0.08
VRK3-206ENST00000594090 ALG11Q2TAA5 492 aa14.53□□□□□ -0.08
VRK3-206ENST00000594090 SIRPB2Q5JXA9 342 aa14.53□□□□□ -0.08
VRK3-206ENST00000594090 RAET1GQ6H3X3 334 aa14.53□□□□□ -0.08
VRK3-206ENST00000594090 HEATR4Q86WZ0 1026 aa14.53□□□□□ -0.08
VRK3-206ENST00000594090 NRSN1Q8IZ57 195 aa14.53□□□□□ -0.08
VRK3-206ENST00000594090 RBFAQ8N0V3 343 aa14.53□□□□□ -0.08
VRK3-206ENST00000594090 ATL2Q8NHH9 583 aa14.53□□□□□ -0.08
VRK3-206ENST00000594090 CCHCR1Q8TD31 782 aa14.53□□□□□ -0.08
VRK3-206ENST00000594090 AP2M1Q96CW1 435 aa14.53□□□□□ -0.08
VRK3-206ENST00000594090 EID2BQ96D98 161 aa14.53□□□□□ -0.08
VRK3-206ENST00000594090 TMEM121Q9BTD3 319 aa14.53□□□□□ -0.08
VRK3-206ENST00000594090 FSD1LQ9BXM9 530 aa14.53□□□□□ -0.08
VRK3-206ENST00000594090 FRMD8P1Q9BZ68 369 aaPredicted RBP14.53□□□□□ -0.08
VRK3-206ENST00000594090 TCEAL2Q9H3H9 227 aaPredicted RBP14.53□□□□□ -0.08
VRK3-206ENST00000594090 ZFYVE1Q9HBF4 777 aa14.53□□□□□ -0.08
VRK3-206ENST00000594090 GOLGA6AQ9NYA3 693 aa14.53□□□□□ -0.08
VRK3-206ENST00000594090 KLQ9UEF7 1012 aa14.53□□□□□ -0.08
VRK3-206ENST00000594090 FTSJ1Q9UET6 329 aa14.53□□□□□ -0.08
VRK3-206ENST00000594090 APOBEC3BQ9UH17 382 aaKnown RBP14.53□□□□□ -0.08
VRK3-206ENST00000594090 ZNF711Q9Y462 761 aa14.53□□□□□ -0.08
VRK3-206ENST00000594090 C5orf60A6NFR6 353 aa14.52□□□□□ -0.08
VRK3-206ENST00000594090 TMEM202A6NGA9 273 aa14.52□□□□□ -0.08
VRK3-206ENST00000594090 FFAR2O15552 330 aa14.52□□□□□ -0.08
VRK3-206ENST00000594090 LIASO43766 372 aa14.52□□□□□ -0.08
VRK3-206ENST00000594090 ANXA9O76027 345 aa14.52□□□□□ -0.08
VRK3-206ENST00000594090 SOD1P00441 154 aa14.52□□□□□ -0.08
VRK3-206ENST00000594090 MYCLP1P12525 358 aaPredicted RBP14.52□□□□□ -0.08
VRK3-206ENST00000594090 HLA-DPA1P20036 260 aa14.52□□□□□ -0.08
VRK3-206ENST00000594090 CHRNA4P43681 627 aa14.52□□□□□ -0.08
VRK3-206ENST00000594090 BLKP51451 505 aa14.52□□□□□ -0.08
VRK3-206ENST00000594090 GDF10P55107 478 aa14.52□□□□□ -0.08
VRK3-206ENST00000594090 CDK3Q00526 305 aa14.52□□□□□ -0.08
VRK3-206ENST00000594090 PPARDQ03181 441 aa14.52□□□□□ -0.08
VRK3-206ENST00000594090 OASLQ15646 514 aaKnown RBP14.52□□□□□ -0.08
VRK3-206ENST00000594090 SLC1A5Q15758 541 aa14.52□□□□□ -0.08
VRK3-206ENST00000594090 FAXCQ5TGI0 409 aa14.52□□□□□ -0.08
VRK3-206ENST00000594090 NYAP1Q6ZVC0 841 aa14.52□□□□□ -0.08
VRK3-206ENST00000594090 SLC25A41Q8N5S1 370 aa14.52□□□□□ -0.08
VRK3-206ENST00000594090 FAM71DQ8N9W8 422 aa14.52□□□□□ -0.08
VRK3-206ENST00000594090 OR56A4Q8NGH8 313 aa14.52□□□□□ -0.08
VRK3-206ENST00000594090 OR4C6Q8NH72 309 aa14.52□□□□□ -0.08
VRK3-206ENST00000594090 SCAMP4Q969E2 229 aa14.52□□□□□ -0.08
VRK3-206ENST00000594090 TSACCQ96A04 125 aaPredicted RBP14.52□□□□□ -0.08
VRK3-206ENST00000594090 PDXPQ96GD0 296 aa14.52□□□□□ -0.08
VRK3-206ENST00000594090 CNDP2Q96KP4 475 aaKnown RBP14.52□□□□□ -0.08
VRK3-206ENST00000594090 TBATAQ96M53 351 aa14.52□□□□□ -0.08
VRK3-206ENST00000594090 SRPK1Q96SB4 655 aaKnown RBP14.52□□□□□ -0.08
VRK3-206ENST00000594090 LRRC61Q9BV99 259 aa14.52□□□□□ -0.08
VRK3-206ENST00000594090 LGR4Q9BXB1 951 aa14.52□□□□□ -0.08
VRK3-206ENST00000594090 TEX101Q9BY14 249 aa14.52□□□□□ -0.08
VRK3-206ENST00000594090 FGF22Q9HCT0 170 aa14.52□□□□□ -0.08
VRK3-206ENST00000594090 PHPT1Q9NRX4 125 aaPredicted RBP14.52□□□□□ -0.08
VRK3-206ENST00000594090 TRMT1Q9NXH9 659 aaKnown RBP14.52□□□□□ -0.08
VRK3-206ENST00000594090 PKD2L2Q9NZM6 624 aa14.52□□□□□ -0.08
VRK3-206ENST00000594090 SHOC2Q9UQ13 582 aa14.52□□□□□ -0.08
VRK3-206ENST00000594090 SPO11Q9Y5K1 396 aa14.52□□□□□ -0.08
VRK3-206ENST00000594090 SCN8AQ9UQD0 1980 aa14.52□□□□□ -0.08
VRK3-206ENST00000594090 CABIN1Q9Y6J0 2220 aa14.52□□□□□ -0.09
VRK3-206ENST00000594090 TDRD6O60522 2096 aaKnown RBP14.52□□□□□ -0.09
VRK3-206ENST00000594090 SPEGQ15772 3267 aa14.52□□□□□ -0.09
VRK3-206ENST00000594090 ENC1O14682 589 aa14.51□□□□□ -0.09
VRK3-206ENST00000594090 AQP9O43315 295 aa14.51□□□□□ -0.09
VRK3-206ENST00000594090 TNFSF14O43557 240 aa14.51□□□□□ -0.09
VRK3-206ENST00000594090 RASGRP1O95267 797 aa14.51□□□□□ -0.09
VRK3-206ENST00000594090 SLC4A1P02730 911 aa14.51□□□□□ -0.09
VRK3-206ENST00000594090 PYGLP06737 847 aa14.51□□□□□ -0.09
VRK3-206ENST00000594090 FTH1P19P0C7X4 201 aa14.51□□□□□ -0.09
VRK3-206ENST00000594090 GIMD1P0DJR0 217 aa14.51□□□□□ -0.09
VRK3-206ENST00000594090 KELP23276 732 aa14.51□□□□□ -0.09
VRK3-206ENST00000594090 CXCR5P32302 372 aa14.51□□□□□ -0.09
VRK3-206ENST00000594090 GPR1P46091 355 aa14.51□□□□□ -0.09
VRK3-206ENST00000594090 HK3P52790 923 aa14.51□□□□□ -0.09
VRK3-206ENST00000594090 SRP54P61011 504 aaKnown RBP14.51□□□□□ -0.09
VRK3-206ENST00000594090 FOXK2Q01167 660 aa14.51□□□□□ -0.09
VRK3-206ENST00000594090 PRPSAP1Q14558 356 aa14.51□□□□□ -0.09
VRK3-206ENST00000594090 SIX1Q15475 284 aaPredicted RBP14.51□□□□□ -0.09
VRK3-206ENST00000594090 PRRT3Q5FWE3 981 aa14.51□□□□□ -0.09
VRK3-206ENST00000594090 KCTD16Q68DU8 428 aa14.51□□□□□ -0.09
VRK3-206ENST00000594090 ARHGEF18Q6ZSZ5 1173 aa14.51□□□□□ -0.09
VRK3-206ENST00000594090 NLRP8Q86W28 1048 aa14.51□□□□□ -0.09
VRK3-206ENST00000594090 HID1Q8IV36 788 aa14.51□□□□□ -0.09
VRK3-206ENST00000594090 LMX1AQ8TE12 382 aa14.51□□□□□ -0.09
VRK3-206ENST00000594090 OR1E3Q8WZA6 343 aa14.51□□□□□ -0.09
VRK3-206ENST00000594090 PPP1R2P1Q96PQ5 205 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms