RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 ODF2Q5BJF6 829 aa13.86□□□□□ -0.19
APOC1-208ENST00000592535 RAET1GQ6H3X3 334 aa13.86□□□□□ -0.19
APOC1-208ENST00000592535 MFSD7Q6UXD7 560 aa13.86□□□□□ -0.19
APOC1-208ENST00000592535 LPCAT1Q8NF37 534 aa13.86□□□□□ -0.19
APOC1-208ENST00000592535 CCL4L1Q8NHW4 92 aa13.86□□□□□ -0.19
APOC1-208ENST00000592535 NAT6Q93015 286 aa13.86□□□□□ -0.19
APOC1-208ENST00000592535 OLFM3Q96PB7 478 aa13.86□□□□□ -0.19
APOC1-208ENST00000592535 CCDC3Q9BQI4 270 aa13.86□□□□□ -0.19
APOC1-208ENST00000592535 ANP32EQ9BTT0 268 aa13.86□□□□□ -0.19
APOC1-208ENST00000592535 CEP41Q9BYV8 373 aa13.86□□□□□ -0.19
APOC1-208ENST00000592535 TMEM168Q9H0V1 697 aa13.86□□□□□ -0.19
APOC1-208ENST00000592535 SUDS3Q9H7L9 328 aaPredicted RBP13.86□□□□□ -0.19
APOC1-208ENST00000592535 PCDH9Q9HC56 1237 aa13.86□□□□□ -0.19
APOC1-208ENST00000592535 PHPT1Q9NRX4 125 aaPredicted RBP13.86□□□□□ -0.19
APOC1-208ENST00000592535 GOLGA6AQ9NYA3 693 aa13.86□□□□□ -0.19
APOC1-208ENST00000592535 LHX6Q9UPM6 363 aa13.86□□□□□ -0.19
APOC1-208ENST00000592535 ANKRD11Q6UB99 2663 aaPredicted RBP13.86□□□□□ -0.19
APOC1-208ENST00000592535 ZZEF1O43149 2961 aa13.86□□□□□ -0.19
APOC1-208ENST00000592535 ZFC3H1O60293 1989 aaKnown RBP13.85□□□□□ -0.19
APOC1-208ENST00000592535 TLX3O43711 291 aaPredicted RBP13.85□□□□□ -0.19
APOC1-208ENST00000592535 BRINP1O60477 761 aa13.85□□□□□ -0.19
APOC1-208ENST00000592535 SOD1P00441 154 aa13.85□□□□□ -0.19
APOC1-208ENST00000592535 FUCA1P04066 466 aa13.85□□□□□ -0.19
APOC1-208ENST00000592535 CEACAM5P06731 702 aa13.85□□□□□ -0.19
APOC1-208ENST00000592535 ZFXP17010 805 aaPredicted RBP13.85□□□□□ -0.19
APOC1-208ENST00000592535 CA4P22748 312 aa13.85□□□□□ -0.19
APOC1-208ENST00000592535 TEAD1P28347 426 aa13.85□□□□□ -0.19
APOC1-208ENST00000592535 CD86P42081 329 aa13.85□□□□□ -0.19
APOC1-208ENST00000592535 SKOR1P84550 965 aa13.85□□□□□ -0.19
APOC1-208ENST00000592535 PTSQ03393 145 aa13.85□□□□□ -0.19
APOC1-208ENST00000592535 PDK1Q15118 436 aa13.85□□□□□ -0.19
APOC1-208ENST00000592535 ISXQ2M1V0 245 aa13.85□□□□□ -0.19
APOC1-208ENST00000592535 B4GALNT4Q76KP1 1039 aa13.85□□□□□ -0.19
APOC1-208ENST00000592535 TAF8Q7Z7C8 310 aa13.85□□□□□ -0.19
APOC1-208ENST00000592535 SFTPA2Q8IWL1 248 aa13.85□□□□□ -0.19
APOC1-208ENST00000592535 CCDC170Q8IYT3 715 aa13.85□□□□□ -0.19
APOC1-208ENST00000592535 PTCD2Q8WV60 388 aaKnown RBP13.85□□□□□ -0.19
APOC1-208ENST00000592535 HNRNPLLQ8WVV9 542 aaKnown RBP13.85□□□□□ -0.19
APOC1-208ENST00000592535 SCAMP4Q969E2 229 aa13.85□□□□□ -0.19
APOC1-208ENST00000592535 AP2M1Q96CW1 435 aa13.85□□□□□ -0.19
APOC1-208ENST00000592535 DCBLD2Q96PD2 775 aa13.85□□□□□ -0.19
APOC1-208ENST00000592535 FRMD8Q9BZ67 464 aaPredicted RBP13.85□□□□□ -0.19
APOC1-208ENST00000592535 ABCG8Q9H221 673 aa13.85□□□□□ -0.19
APOC1-208ENST00000592535 SEPT10Q9P0V9 454 aa13.85□□□□□ -0.19
APOC1-208ENST00000592535 RABGEF1Q9UJ41 708 aa13.85□□□□□ -0.19
APOC1-208ENST00000592535 PCDHA13Q9Y5I0 950 aa13.85□□□□□ -0.19
APOC1-208ENST00000592535 ALG6Q9Y672 507 aa13.85□□□□□ -0.19
APOC1-208ENST00000592535 PPP1R12AO14974 1030 aaPredicted RBP13.84□□□□□ -0.19
APOC1-208ENST00000592535 PSTPIP1O43586 416 aa13.84□□□□□ -0.19
APOC1-208ENST00000592535 USP12O75317 370 aa13.84□□□□□ -0.19
APOC1-208ENST00000592535 CLDN7O95471 211 aa13.84□□□□□ -0.19
APOC1-208ENST00000592535 MPOP05164 745 aa13.84□□□□□ -0.19
APOC1-208ENST00000592535 ZNF30P17039 623 aa13.84□□□□□ -0.19
APOC1-208ENST00000592535 CYLC1P35663 651 aaPredicted RBP13.84□□□□□ -0.19
APOC1-208ENST00000592535 CDKN2BP42772 138 aa13.84□□□□□ -0.19
APOC1-208ENST00000592535 GPR1P46091 355 aa13.84□□□□□ -0.19
APOC1-208ENST00000592535 MARCKSL1P49006 195 aa13.84□□□□□ -0.19
APOC1-208ENST00000592535 STC1P52823 247 aa13.84□□□□□ -0.19
APOC1-208ENST00000592535 RPL26P61254 145 aaKnown RBP13.84□□□□□ -0.19
APOC1-208ENST00000592535 DPTQ07507 201 aa13.84□□□□□ -0.19
APOC1-208ENST00000592535 LLGL1Q15334 1064 aa13.84□□□□□ -0.19
APOC1-208ENST00000592535 TAZQ16635 292 aa13.84□□□□□ -0.19
APOC1-208ENST00000592535 QPCTQ16769 361 aa13.84□□□□□ -0.19
APOC1-208ENST00000592535 COL28A1Q2UY09 1125 aa13.84□□□□□ -0.19
APOC1-208ENST00000592535 DOK6Q6PKX4 331 aa13.84□□□□□ -0.19
APOC1-208ENST00000592535 SPOCD1Q6ZMY3 1216 aa13.84□□□□□ -0.19
APOC1-208ENST00000592535 FAM46DQ8NEK8 389 aa13.84□□□□□ -0.19
APOC1-208ENST00000592535 GPR156Q8NFN8 814 aa13.84□□□□□ -0.19
APOC1-208ENST00000592535 CCDC74AQ96AQ1 378 aa13.84□□□□□ -0.19
APOC1-208ENST00000592535 MRFAP1L1Q96HT8 127 aa13.84□□□□□ -0.19
APOC1-208ENST00000592535 AGAP2Q99490 1192 aa13.84□□□□□ -0.19
APOC1-208ENST00000592535 SYNDIG1Q9H7V2 258 aa13.84□□□□□ -0.19
APOC1-208ENST00000592535 CARS2Q9HA77 564 aaKnown RBP13.84□□□□□ -0.19
APOC1-208ENST00000592535 SAE1Q9UBE0 346 aaPredicted RBP13.84□□□□□ -0.19
APOC1-208ENST00000592535 RPL26L1Q9UNX3 145 aaKnown RBP13.84□□□□□ -0.19
APOC1-208ENST00000592535 CFAP47Q6ZTR5 3102 aa13.84□□□□□ -0.19
APOC1-208ENST00000592535 A0A087WV48 116 aa13.83□□□□□ -0.2
APOC1-208ENST00000592535 SOWAHDA6NJG2 315 aa13.83□□□□□ -0.2
APOC1-208ENST00000592535 NOBOXO60393 691 aa13.83□□□□□ -0.2
APOC1-208ENST00000592535 CST8O60676 142 aa13.83□□□□□ -0.2
APOC1-208ENST00000592535 PECAM1P16284 738 aaPredicted RBP13.83□□□□□ -0.2
APOC1-208ENST00000592535 GNPDA1P46926 289 aa13.83□□□□□ -0.2
APOC1-208ENST00000592535 POLD2P49005 469 aa13.83□□□□□ -0.2
APOC1-208ENST00000592535 GABREP78334 506 aa13.83□□□□□ -0.2
APOC1-208ENST00000592535 GALNT3Q14435 633 aa13.83□□□□□ -0.2
APOC1-208ENST00000592535 SPA17Q15506 151 aa13.83□□□□□ -0.2
APOC1-208ENST00000592535 KAZNQ674X7 775 aa13.83□□□□□ -0.2
APOC1-208ENST00000592535 OGFOD3Q6PK18 319 aa13.83□□□□□ -0.2
APOC1-208ENST00000592535 RBM44Q6ZP01 1051 aaKnown RBP13.83□□□□□ -0.2
APOC1-208ENST00000592535 ZNF765Q7L2R6 523 aa13.83□□□□□ -0.2
APOC1-208ENST00000592535 GAS2L3Q86XJ1 694 aa13.83□□□□□ -0.2
APOC1-208ENST00000592535 NRROSQ86YC3 692 aa13.83□□□□□ -0.2
APOC1-208ENST00000592535 ATXN7L3BQ96GX2 97 aa13.83□□□□□ -0.2
APOC1-208ENST00000592535 AGAP3Q96P47 875 aa13.83□□□□□ -0.2
APOC1-208ENST00000592535 PANX2Q96RD6 677 aa13.83□□□□□ -0.2
APOC1-208ENST00000592535 LYSMD1Q96S90 227 aa13.83□□□□□ -0.2
APOC1-208ENST00000592535 RIOK2Q9BVS4 552 aaKnown RBP13.83□□□□□ -0.2
APOC1-208ENST00000592535 DNPEPQ9ULA0 475 aa13.83□□□□□ -0.2
APOC1-208ENST00000592535 SUFUQ9UMX1 484 aa13.83□□□□□ -0.2
APOC1-208ENST00000592535 SLC17A4Q9Y2C5 497 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms