RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-222ENST00000590619 PCDHGB6Q9Y5F9 930 aa6.43□□□□□ -1.38
DNMT1-222ENST00000590619 NBEAL1Q6ZS30 2694 aa6.43□□□□□ -1.38
DNMT1-222ENST00000590619 LRP4O75096 1905 aa6.42□□□□□ -1.38
DNMT1-222ENST00000590619 IGLV3-10A0A075B6K4 115 aa6.42□□□□□ -1.38
DNMT1-222ENST00000590619 CFAP69A5D8W1 941 aa6.42□□□□□ -1.38
DNMT1-222ENST00000590619 PDE2AO00408 941 aaPredicted RBP6.42□□□□□ -1.38
DNMT1-222ENST00000590619 ANKRD34CP0C6C1 535 aa6.42□□□□□ -1.38
DNMT1-222ENST00000590619 KRT13P13646 458 aa6.42□□□□□ -1.38
DNMT1-222ENST00000590619 GM2AP17900 193 aa6.42□□□□□ -1.38
DNMT1-222ENST00000590619 XPAP23025 273 aaPredicted RBP6.42□□□□□ -1.38
DNMT1-222ENST00000590619 ACADSBP45954 432 aa6.42□□□□□ -1.38
DNMT1-222ENST00000590619 POLD2P49005 469 aa6.42□□□□□ -1.38
DNMT1-222ENST00000590619 NASPP49321 788 aaPredicted RBP6.42□□□□□ -1.38
DNMT1-222ENST00000590619 SEPHS1P49903 392 aa6.42□□□□□ -1.38
DNMT1-222ENST00000590619 SUOXP51687 545 aa6.42□□□□□ -1.38
DNMT1-222ENST00000590619 TLE4Q04727 773 aa6.42□□□□□ -1.38
DNMT1-222ENST00000590619 ENPEPQ07075 957 aa6.42□□□□□ -1.38
DNMT1-222ENST00000590619 ELP6Q0PNE2 266 aa6.42□□□□□ -1.38
DNMT1-222ENST00000590619 NME3Q13232 169 aa6.42□□□□□ -1.38
DNMT1-222ENST00000590619 MTA1Q13330 715 aa6.42□□□□□ -1.38
DNMT1-222ENST00000590619 NFATC2Q13469 925 aa6.42□□□□□ -1.38
DNMT1-222ENST00000590619 CUL4BQ13620 913 aa6.42□□□□□ -1.38
DNMT1-222ENST00000590619 POLD3Q15054 466 aaPredicted RBP6.42□□□□□ -1.38
DNMT1-222ENST00000590619 LLGL1Q15334 1064 aa6.42□□□□□ -1.38
DNMT1-222ENST00000590619 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.42□□□□□ -1.38
DNMT1-222ENST00000590619 DCAF10Q5QP82 559 aa6.42□□□□□ -1.38
DNMT1-222ENST00000590619 FAM69BQ5VUD6 431 aa6.42□□□□□ -1.38
DNMT1-222ENST00000590619 LYPLAL1Q5VWZ2 237 aa6.42□□□□□ -1.38
DNMT1-222ENST00000590619 FAM173BQ6P4H8 233 aa6.42□□□□□ -1.38
DNMT1-222ENST00000590619 TMEM270Q6UE05 265 aa6.42□□□□□ -1.38
DNMT1-222ENST00000590619 ZNF783Q6ZMS7 281 aa6.42□□□□□ -1.38
DNMT1-222ENST00000590619 MED25Q71SY5 747 aa6.42□□□□□ -1.38
DNMT1-222ENST00000590619 CXXC5Q7LFL8 322 aaKnown RBP6.42□□□□□ -1.38
DNMT1-222ENST00000590619 BRAPQ7Z569 592 aa6.42□□□□□ -1.38
DNMT1-222ENST00000590619 GUF1Q8N442 669 aaKnown RBP6.42□□□□□ -1.38
DNMT1-222ENST00000590619 SFRP1Q8N474 314 aa6.42□□□□□ -1.38
DNMT1-222ENST00000590619 ZNF808Q8N4W9 903 aaPredicted RBP6.42□□□□□ -1.38
DNMT1-222ENST00000590619 ZBTB2Q8N680 514 aa6.42□□□□□ -1.38
DNMT1-222ENST00000590619 TMEM102Q8N9M5 508 aaPredicted RBP6.42□□□□□ -1.38
DNMT1-222ENST00000590619 KIAA0895Q8NCT3 520 aa6.42□□□□□ -1.38
DNMT1-222ENST00000590619 SLC37A2Q8TED4 501 aa6.42□□□□□ -1.38
DNMT1-222ENST00000590619 ARHGEF2Q92974 986 aaKnown RBP6.42□□□□□ -1.38
DNMT1-222ENST00000590619 DHX58Q96C10 678 aa6.42□□□□□ -1.38
DNMT1-222ENST00000590619 C1orf74Q96LT6 269 aa6.42□□□□□ -1.38
DNMT1-222ENST00000590619 C9orf72Q96LT7 481 aa6.42□□□□□ -1.38
DNMT1-222ENST00000590619 SLC2A13Q96QE2 648 aa6.42□□□□□ -1.38
DNMT1-222ENST00000590619 TRIM62Q9BVG3 475 aa6.42□□□□□ -1.38
DNMT1-222ENST00000590619 TKTL2Q9H0I9 626 aa6.42□□□□□ -1.38
DNMT1-222ENST00000590619 WDCPQ9H6R7 721 aa6.42□□□□□ -1.38
DNMT1-222ENST00000590619 ZNF552Q9H707 407 aaPredicted RBP6.42□□□□□ -1.38
DNMT1-222ENST00000590619 DLL4Q9NR61 685 aa6.42□□□□□ -1.38
DNMT1-222ENST00000590619 SEMA3GQ9NS98 782 aa6.42□□□□□ -1.38
DNMT1-222ENST00000590619 FAM13BQ9NYF5 915 aa6.42□□□□□ -1.38
DNMT1-222ENST00000590619 TRAF3IP3Q9Y228 551 aa6.42□□□□□ -1.38
DNMT1-222ENST00000590619 MFHAS1Q9Y4C4 1052 aa6.42□□□□□ -1.38
DNMT1-222ENST00000590619 JMJD1CQ15652 2540 aa6.42□□□□□ -1.38
DNMT1-222ENST00000590619 CHD5Q8TDI0 1954 aa6.42□□□□□ -1.38
DNMT1-222ENST00000590619 CXorf51AA0A1B0GTR3 108 aa6.41□□□□□ -1.38
DNMT1-222ENST00000590619 RASA4BC9J798 803 aa6.41□□□□□ -1.38
DNMT1-222ENST00000590619 E5RJQ4 531 aa6.41□□□□□ -1.38
DNMT1-222ENST00000590619 RASA4O43374 803 aa6.41□□□□□ -1.38
DNMT1-222ENST00000590619 THAP12O43422 761 aa6.41□□□□□ -1.38
DNMT1-222ENST00000590619 KLRC4O43908 158 aa6.41□□□□□ -1.38
DNMT1-222ENST00000590619 SRGAP2O75044 1071 aa6.41□□□□□ -1.38
DNMT1-222ENST00000590619 C9P02748 559 aa6.41□□□□□ -1.38
DNMT1-222ENST00000590619 FECHP22830 423 aa6.41□□□□□ -1.38
DNMT1-222ENST00000590619 ACTR1BP42025 376 aa6.41□□□□□ -1.38
DNMT1-222ENST00000590619 MAPK9P45984 424 aa6.41□□□□□ -1.38
DNMT1-222ENST00000590619 IST1P53990 364 aa6.41□□□□□ -1.38
DNMT1-222ENST00000590619 GFERP55789 205 aa6.41□□□□□ -1.38
DNMT1-222ENST00000590619 ACTR1AP61163 376 aa6.41□□□□□ -1.38
DNMT1-222ENST00000590619 RAD51Q06609 339 aa6.41□□□□□ -1.38
DNMT1-222ENST00000590619 LRMPQ12912 555 aa6.41□□□□□ -1.38
DNMT1-222ENST00000590619 PEX6Q13608 980 aa6.41□□□□□ -1.38
DNMT1-222ENST00000590619 CDSNQ15517 529 aa6.41□□□□□ -1.38
DNMT1-222ENST00000590619 VWA5B1Q5TIE3 1220 aa6.41□□□□□ -1.38
DNMT1-222ENST00000590619 LCN10Q6JVE6 187 aa6.41□□□□□ -1.38
DNMT1-222ENST00000590619 PWWP2BQ6NUJ5 590 aa6.41□□□□□ -1.38
DNMT1-222ENST00000590619 DENND1BQ6P3S1 775 aa6.41□□□□□ -1.38
DNMT1-222ENST00000590619 LRRC31Q6UY01 552 aa6.41□□□□□ -1.38
DNMT1-222ENST00000590619 LIPIQ6XZB0 460 aa6.41□□□□□ -1.38
DNMT1-222ENST00000590619 Q71RC1 249 aaPredicted RBP6.41□□□□□ -1.38
DNMT1-222ENST00000590619 TAOK1Q7L7X3 1001 aa6.41□□□□□ -1.38
DNMT1-222ENST00000590619 PPP1R3BQ86XI6 285 aa6.41□□□□□ -1.38
DNMT1-222ENST00000590619 PLXDC1Q8IUK5 500 aa6.41□□□□□ -1.38
DNMT1-222ENST00000590619 ZADH2Q8N4Q0 377 aa6.41□□□□□ -1.38
DNMT1-222ENST00000590619 HCAR2Q8TDS4 363 aa6.41□□□□□ -1.38
DNMT1-222ENST00000590619 STK32AQ8WU08 396 aa6.41□□□□□ -1.38
DNMT1-222ENST00000590619 CCDC120Q96HB5 630 aa6.41□□□□□ -1.38
DNMT1-222ENST00000590619 TBC1D10AQ9BXI6 508 aa6.41□□□□□ -1.38
DNMT1-222ENST00000590619 TEX101Q9BY14 249 aa6.41□□□□□ -1.38
DNMT1-222ENST00000590619 FRMD8Q9BZ67 464 aaPredicted RBP6.41□□□□□ -1.38
DNMT1-222ENST00000590619 TTYH3Q9C0H2 523 aa6.41□□□□□ -1.38
DNMT1-222ENST00000590619 CXXC4Q9H2H0 198 aa6.41□□□□□ -1.38
DNMT1-222ENST00000590619 CUEDC2Q9H467 287 aa6.41□□□□□ -1.38
DNMT1-222ENST00000590619 SUV39H2Q9H5I1 410 aa6.41□□□□□ -1.38
DNMT1-222ENST00000590619 WDR26Q9H7D7 661 aa6.41□□□□□ -1.38
DNMT1-222ENST00000590619 PPP4R2Q9NY27 417 aa6.41□□□□□ -1.38
DNMT1-222ENST00000590619 AJAP1Q9UKB5 411 aaPredicted RBP6.41□□□□□ -1.38
DNMT1-222ENST00000590619 SLC17A4Q9Y2C5 497 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms