RNA–Protein interactions for RNA: ENST00000590188.5

CIRBP-227, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-227ENST00000590188 NT5DC3Q86UY8 548 aa18■□□□□ 0.47
CIRBP-227ENST00000590188 TMEM139Q8IV31 216 aa18■□□□□ 0.47
CIRBP-227ENST00000590188 RCOR2Q8IZ40 523 aa18■□□□□ 0.47
CIRBP-227ENST00000590188 CBARPQ8N350 705 aaPredicted RBP18■□□□□ 0.47
CIRBP-227ENST00000590188 FSTL5Q8N475 847 aaPredicted RBP18■□□□□ 0.47
CIRBP-227ENST00000590188 SCAMP4Q969E2 229 aa18■□□□□ 0.47
CIRBP-227ENST00000590188 RBM41Q96IZ5 413 aaKnown RBP18■□□□□ 0.47
CIRBP-227ENST00000590188 ABCG8Q9H221 673 aa18■□□□□ 0.47
CIRBP-227ENST00000590188 PHPT1Q9NRX4 125 aaPredicted RBP18■□□□□ 0.47
CIRBP-227ENST00000590188 EVA1BQ9NVM1 165 aa18■□□□□ 0.47
CIRBP-227ENST00000590188 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18■□□□□ 0.47
CIRBP-227ENST00000590188 WDFY3Q8IZQ1 3526 aa18■□□□□ 0.47
CIRBP-227ENST00000590188 LRP4O75096 1905 aa18■□□□□ 0.47
CIRBP-227ENST00000590188 TPP1O14773 563 aa17.99■□□□□ 0.47
CIRBP-227ENST00000590188 CASC3O15234 703 aaKnown RBP17.99■□□□□ 0.47
CIRBP-227ENST00000590188 MT-CO3P00414 261 aa17.99■□□□□ 0.47
CIRBP-227ENST00000590188 SLC4A1P02730 911 aa17.99■□□□□ 0.47
CIRBP-227ENST00000590188 PIRTP0C851 137 aa17.99■□□□□ 0.47
CIRBP-227ENST00000590188 MYCLP1P12525 358 aaPredicted RBP17.99■□□□□ 0.47
CIRBP-227ENST00000590188 TGM2P21980 687 aa17.99■□□□□ 0.47
CIRBP-227ENST00000590188 KELP23276 732 aa17.99■□□□□ 0.47
CIRBP-227ENST00000590188 PTPN3P26045 913 aa17.99■□□□□ 0.47
CIRBP-227ENST00000590188 CDK3Q00526 305 aa17.99■□□□□ 0.47
CIRBP-227ENST00000590188 E2F1Q01094 437 aa17.99■□□□□ 0.47
CIRBP-227ENST00000590188 PRKD1Q15139 912 aaPredicted RBP17.99■□□□□ 0.47
CIRBP-227ENST00000590188 PERM1Q5SV97 790 aa17.99■□□□□ 0.47
CIRBP-227ENST00000590188 TAF8Q7Z7C8 310 aa17.99■□□□□ 0.47
CIRBP-227ENST00000590188 TRIM74Q86UV6 250 aa17.99■□□□□ 0.47
CIRBP-227ENST00000590188 GKN2Q86XP6 184 aa17.99■□□□□ 0.47
CIRBP-227ENST00000590188 KYQ8NBH2 561 aa17.99■□□□□ 0.47
CIRBP-227ENST00000590188 EXD1Q8NHP7 514 aa17.99■□□□□ 0.47
CIRBP-227ENST00000590188 SPATA22Q8NHS9 363 aa17.99■□□□□ 0.47
CIRBP-227ENST00000590188 CCL4L1Q8NHW4 92 aa17.99■□□□□ 0.47
CIRBP-227ENST00000590188 MAPK15Q8TD08 544 aa17.99■□□□□ 0.47
CIRBP-227ENST00000590188 PTCD2Q8WV60 388 aaKnown RBP17.99■□□□□ 0.47
CIRBP-227ENST00000590188 TFB1MQ8WVM0 346 aaKnown RBP17.99■□□□□ 0.47
CIRBP-227ENST00000590188 P3H4Q92791 437 aa17.99■□□□□ 0.47
CIRBP-227ENST00000590188 GLMNQ92990 594 aa17.99■□□□□ 0.47
CIRBP-227ENST00000590188 AP2M1Q96CW1 435 aa17.99■□□□□ 0.47
CIRBP-227ENST00000590188 TBATAQ96M53 351 aa17.99■□□□□ 0.47
CIRBP-227ENST00000590188 AGAP2Q99490 1192 aa17.99■□□□□ 0.47
CIRBP-227ENST00000590188 BOCQ9BWV1 1114 aa17.99■□□□□ 0.47
CIRBP-227ENST00000590188 TMEM168Q9H0V1 697 aa17.99■□□□□ 0.47
CIRBP-227ENST00000590188 ABCG4Q9H172 646 aa17.99■□□□□ 0.47
CIRBP-227ENST00000590188 SYNDIG1Q9H7V2 258 aa17.99■□□□□ 0.47
CIRBP-227ENST00000590188 C10orf88Q9H8K7 445 aa17.99■□□□□ 0.47
CIRBP-227ENST00000590188 CARS2Q9HA77 564 aaKnown RBP17.99■□□□□ 0.47
CIRBP-227ENST00000590188 UBP1Q9NZI7 540 aa17.99■□□□□ 0.47
CIRBP-227ENST00000590188 TRIM10Q9UDY6 481 aa17.99■□□□□ 0.47
CIRBP-227ENST00000590188 GPR34Q9UPC5 381 aa17.99■□□□□ 0.47
CIRBP-227ENST00000590188 CLCA2Q9UQC9 943 aa17.99■□□□□ 0.47
CIRBP-227ENST00000590188 GOLGA4Q13439 2230 aaKnown RBP17.98■□□□□ 0.47
CIRBP-227ENST00000590188 C1orf232A0A0U1RR37 186 aa17.98■□□□□ 0.47
CIRBP-227ENST00000590188 PRSS38A1L453 326 aa17.98■□□□□ 0.47
CIRBP-227ENST00000590188 MACROD2A1Z1Q3 448 aa17.98■□□□□ 0.47
CIRBP-227ENST00000590188 TAF4O00268 1085 aa17.98■□□□□ 0.47
CIRBP-227ENST00000590188 OPA1O60313 960 aa17.98■□□□□ 0.47
CIRBP-227ENST00000590188 MT-CYBP00156 380 aaPredicted RBP17.98■□□□□ 0.47
CIRBP-227ENST00000590188 ZNF30P17039 623 aa17.98■□□□□ 0.47
CIRBP-227ENST00000590188 CDC25BP30305 580 aa17.98■□□□□ 0.47
CIRBP-227ENST00000590188 POLD2P49005 469 aa17.98■□□□□ 0.47
CIRBP-227ENST00000590188 STC1P52823 247 aa17.98■□□□□ 0.47
CIRBP-227ENST00000590188 TEX44Q53QW1 395 aa17.98■□□□□ 0.47
CIRBP-227ENST00000590188 BZW1Q7L1Q6 419 aaKnown RBP17.98■□□□□ 0.47
CIRBP-227ENST00000590188 SFTPA2Q8IWL1 248 aa17.98■□□□□ 0.47
CIRBP-227ENST00000590188 IMP4Q96G21 291 aaKnown RBP17.98■□□□□ 0.47
CIRBP-227ENST00000590188 HERPUD2Q9BSE4 406 aa17.98■□□□□ 0.47
CIRBP-227ENST00000590188 MLPHQ9BV36 600 aaPredicted RBP17.98■□□□□ 0.47
CIRBP-227ENST00000590188 RIOK2Q9BVS4 552 aaKnown RBP17.98■□□□□ 0.47
CIRBP-227ENST00000590188 TEX101Q9BY14 249 aa17.98■□□□□ 0.47
CIRBP-227ENST00000590188 USP29Q9HBJ7 922 aa17.98■□□□□ 0.47
CIRBP-227ENST00000590188 GLOD4Q9HC38 313 aa17.98■□□□□ 0.47
CIRBP-227ENST00000590188 DGKBQ9Y6T7 804 aa17.98■□□□□ 0.47
CIRBP-227ENST00000590188 GRID2IPA4D2P6 1211 aa17.97■□□□□ 0.47
CIRBP-227ENST00000590188 EME2A4GXA9 379 aaPredicted RBP17.97■□□□□ 0.47
CIRBP-227ENST00000590188 SRRM3A6NNA2 597 aaPredicted RBP17.97■□□□□ 0.47
CIRBP-227ENST00000590188 ANKRD66B4E2M5 251 aa17.97■□□□□ 0.47
CIRBP-227ENST00000590188 INPP4BO15327 924 aa17.97■□□□□ 0.47
CIRBP-227ENST00000590188 PMPCBO75439 489 aa17.97■□□□□ 0.47
CIRBP-227ENST00000590188 SOD1P00441 154 aa17.97■□□□□ 0.47
CIRBP-227ENST00000590188 CAPNS1P04632 268 aa17.97■□□□□ 0.47
CIRBP-227ENST00000590188 HOXC4P09017 264 aaPredicted RBP17.97■□□□□ 0.47
CIRBP-227ENST00000590188 CTNNA1P35221 906 aaKnown RBP17.97■□□□□ 0.47
CIRBP-227ENST00000590188 GNPDA1P46926 289 aa17.97■□□□□ 0.47
CIRBP-227ENST00000590188 NR2C2P49116 596 aa17.97■□□□□ 0.47
CIRBP-227ENST00000590188 RPIAP49247 311 aa17.97■□□□□ 0.47
CIRBP-227ENST00000590188 CCDC181Q5TID7 509 aa17.97■□□□□ 0.47
CIRBP-227ENST00000590188 AADACL2Q6P093 401 aa17.97■□□□□ 0.47
CIRBP-227ENST00000590188 PDCD7Q8N8D1 485 aaKnown RBP17.97■□□□□ 0.47
CIRBP-227ENST00000590188 KIAA1524Q8TCG1 905 aa17.97■□□□□ 0.47
CIRBP-227ENST00000590188 SCG3Q8WXD2 468 aaKnown RBP17.97■□□□□ 0.47
CIRBP-227ENST00000590188 FAM118BQ9BPY3 351 aa17.97■□□□□ 0.47
CIRBP-227ENST00000590188 SLC25A51Q9H1U9 297 aa17.97■□□□□ 0.47
CIRBP-227ENST00000590188 KCTD5Q9NXV2 234 aa17.97■□□□□ 0.47
CIRBP-227ENST00000590188 KLHL8Q9P2G9 620 aaPredicted RBP17.97■□□□□ 0.47
CIRBP-227ENST00000590188 IMPACTQ9P2X3 320 aa17.97■□□□□ 0.47
CIRBP-227ENST00000590188 PADI4Q9UM07 663 aa17.97■□□□□ 0.47
CIRBP-227ENST00000590188 SHOC2Q9UQ13 582 aa17.97■□□□□ 0.47
CIRBP-227ENST00000590188 TMEM98Q9Y2Y6 226 aa17.97■□□□□ 0.47
CIRBP-227ENST00000590188 PCDHB1Q9Y5F3 818 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms