RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 KIAA1024LP59773 190 aa12.07□□□□□ -0.48
TPM4-212ENST00000590180 NR0B2Q15466 257 aa12.07□□□□□ -0.48
TPM4-212ENST00000590180 PCSK7Q16549 785 aa12.07□□□□□ -0.48
TPM4-212ENST00000590180 QPCTQ16769 361 aa12.07□□□□□ -0.48
TPM4-212ENST00000590180 LRRK1Q38SD2 2015 aa12.07□□□□□ -0.48
TPM4-212ENST00000590180 HES3Q5TGS1 186 aa12.07□□□□□ -0.48
TPM4-212ENST00000590180 CCDC70Q6NSX1 233 aa12.07□□□□□ -0.48
TPM4-212ENST00000590180 PID1Q7Z2X4 250 aa12.07□□□□□ -0.48
TPM4-212ENST00000590180 TECPR1Q7Z6L1 1165 aa12.07□□□□□ -0.48
TPM4-212ENST00000590180 GKN2Q86XP6 184 aa12.07□□□□□ -0.48
TPM4-212ENST00000590180 ZCCHC14Q8WYQ9 949 aaKnown RBP12.07□□□□□ -0.48
TPM4-212ENST00000590180 OR1E3Q8WZA6 343 aa12.07□□□□□ -0.48
TPM4-212ENST00000590180 AP2M1Q96CW1 435 aa12.07□□□□□ -0.48
TPM4-212ENST00000590180 IMP4Q96G21 291 aaKnown RBP12.07□□□□□ -0.48
TPM4-212ENST00000590180 TBATAQ96M53 351 aa12.07□□□□□ -0.48
TPM4-212ENST00000590180 DESI2Q9BSY9 194 aa12.07□□□□□ -0.48
TPM4-212ENST00000590180 CLPBQ9H078 707 aa12.07□□□□□ -0.48
TPM4-212ENST00000590180 SLC25A51Q9H1U9 297 aa12.07□□□□□ -0.48
TPM4-212ENST00000590180 ABCG8Q9H221 673 aa12.07□□□□□ -0.48
TPM4-212ENST00000590180 SUDS3Q9H7L9 328 aaPredicted RBP12.07□□□□□ -0.48
TPM4-212ENST00000590180 USP29Q9HBJ7 922 aa12.07□□□□□ -0.48
TPM4-212ENST00000590180 GLOD4Q9HC38 313 aa12.07□□□□□ -0.48
TPM4-212ENST00000590180 MRPL40Q9NQ50 206 aaKnown RBP12.07□□□□□ -0.48
TPM4-212ENST00000590180 NCKIPSDQ9NZQ3 722 aa12.07□□□□□ -0.48
TPM4-212ENST00000590180 SIRPGQ9P1W8 387 aa12.07□□□□□ -0.48
TPM4-212ENST00000590180 DNPEPQ9ULA0 475 aa12.07□□□□□ -0.48
TPM4-212ENST00000590180 ASXL3Q9C0F0 2248 aa12.06□□□□□ -0.48
TPM4-212ENST00000590180 MACROD2A1Z1Q3 448 aa12.06□□□□□ -0.48
TPM4-212ENST00000590180 CCDC66A2RUB6 948 aa12.06□□□□□ -0.48
TPM4-212ENST00000590180 TMEM8BA6NDV4 472 aa12.06□□□□□ -0.48
TPM4-212ENST00000590180 CAPN8A6NHC0 703 aa12.06□□□□□ -0.48
TPM4-212ENST00000590180 H7C0C1 242 aa12.06□□□□□ -0.48
TPM4-212ENST00000590180 TNFRSF10CO14798 259 aa12.06□□□□□ -0.48
TPM4-212ENST00000590180 PMPCBO75439 489 aa12.06□□□□□ -0.48
TPM4-212ENST00000590180 MT-CO3P00414 261 aa12.06□□□□□ -0.48
TPM4-212ENST00000590180 ZNF30P17039 623 aa12.06□□□□□ -0.48
TPM4-212ENST00000590180 PTPN3P26045 913 aa12.06□□□□□ -0.48
TPM4-212ENST00000590180 CTNNA1P35221 906 aaKnown RBP12.06□□□□□ -0.48
TPM4-212ENST00000590180 ATP5OP48047 213 aa12.06□□□□□ -0.48
TPM4-212ENST00000590180 RWDD2BP57060 319 aa12.06□□□□□ -0.48
TPM4-212ENST00000590180 COPS2P61201 443 aa12.06□□□□□ -0.48
TPM4-212ENST00000590180 TARDBPQ13148 414 aaKnown RBP eCLIP12.06□□□□□ -0.48
TPM4-212ENST00000590180 GALNT3Q14435 633 aa12.06□□□□□ -0.48
TPM4-212ENST00000590180 PRKD1Q15139 912 aaPredicted RBP12.06□□□□□ -0.48
TPM4-212ENST00000590180 LVRNQ6Q4G3 990 aa12.06□□□□□ -0.48
TPM4-212ENST00000590180 BBS12Q6ZW61 710 aa12.06□□□□□ -0.48
TPM4-212ENST00000590180 EFL1Q7Z2Z2 1120 aaKnown RBP12.06□□□□□ -0.48
TPM4-212ENST00000590180 TAF8Q7Z7C8 310 aa12.06□□□□□ -0.48
TPM4-212ENST00000590180 HEATR4Q86WZ0 1026 aa12.06□□□□□ -0.48
TPM4-212ENST00000590180 TMEM139Q8IV31 216 aa12.06□□□□□ -0.48
TPM4-212ENST00000590180 KDF1Q8NAX2 398 aaPredicted RBP12.06□□□□□ -0.48
TPM4-212ENST00000590180 SPATA22Q8NHS9 363 aa12.06□□□□□ -0.48
TPM4-212ENST00000590180 IFI44Q8TCB0 444 aa12.06□□□□□ -0.48
TPM4-212ENST00000590180 MAPK15Q8TD08 544 aa12.06□□□□□ -0.48
TPM4-212ENST00000590180 CCHCR1Q8TD31 782 aa12.06□□□□□ -0.48
TPM4-212ENST00000590180 SCAMP4Q969E2 229 aa12.06□□□□□ -0.48
TPM4-212ENST00000590180 PDXPQ96GD0 296 aa12.06□□□□□ -0.48
TPM4-212ENST00000590180 TEKT5Q96M29 485 aa12.06□□□□□ -0.48
TPM4-212ENST00000590180 OSBPL8Q9BZF1 889 aa12.06□□□□□ -0.48
TPM4-212ENST00000590180 CCDC86Q9H6F5 360 aaKnown RBP12.06□□□□□ -0.48
TPM4-212ENST00000590180 FGF22Q9HCT0 170 aa12.06□□□□□ -0.48
TPM4-212ENST00000590180 UBP1Q9NZI7 540 aa12.06□□□□□ -0.48
TPM4-212ENST00000590180 KLHL8Q9P2G9 620 aaPredicted RBP12.06□□□□□ -0.48
TPM4-212ENST00000590180 AMFRQ9UKV5 643 aa12.06□□□□□ -0.48
TPM4-212ENST00000590180 ZMIZ1Q9ULJ6 1067 aa12.06□□□□□ -0.48
TPM4-212ENST00000590180 GPR34Q9UPC5 381 aa12.06□□□□□ -0.48
TPM4-212ENST00000590180 DGKBQ9Y6T7 804 aa12.06□□□□□ -0.48
TPM4-212ENST00000590180 LY6G6EA0A0G2JKS1 128 aa12.05□□□□□ -0.48
TPM4-212ENST00000590180 C1orf232A0A0U1RR37 186 aa12.05□□□□□ -0.48
TPM4-212ENST00000590180 GRID2IPA4D2P6 1211 aa12.05□□□□□ -0.48
TPM4-212ENST00000590180 MTSS1O43312 755 aa12.05□□□□□ -0.48
TPM4-212ENST00000590180 OPA1O60313 960 aa12.05□□□□□ -0.48
TPM4-212ENST00000590180 MT-CYBP00156 380 aaPredicted RBP12.05□□□□□ -0.48
TPM4-212ENST00000590180 PTMAP06454 111 aaKnown RBP12.05□□□□□ -0.48
TPM4-212ENST00000590180 MYCLP1P12525 358 aaPredicted RBP12.05□□□□□ -0.48
TPM4-212ENST00000590180 CTNNA2P26232 953 aa12.05□□□□□ -0.48
TPM4-212ENST00000590180 STC1P52823 247 aa12.05□□□□□ -0.48
TPM4-212ENST00000590180 CDK3Q00526 305 aa12.05□□□□□ -0.48
TPM4-212ENST00000590180 INSM1Q01101 510 aaPredicted RBP12.05□□□□□ -0.48
TPM4-212ENST00000590180 CDK18Q07002 472 aa12.05□□□□□ -0.48
TPM4-212ENST00000590180 DPTQ07507 201 aa12.05□□□□□ -0.48
TPM4-212ENST00000590180 CYP4F3Q08477 520 aa12.05□□□□□ -0.48
TPM4-212ENST00000590180 PPP2R5EQ16537 467 aa12.05□□□□□ -0.48
TPM4-212ENST00000590180 C6orf132Q5T0Z8 1188 aa12.05□□□□□ -0.48
TPM4-212ENST00000590180 KCTD16Q68DU8 428 aa12.05□□□□□ -0.48
TPM4-212ENST00000590180 GUSBP11Q6P575 273 aa12.05□□□□□ -0.48
TPM4-212ENST00000590180 DOK6Q6PKX4 331 aa12.05□□□□□ -0.48
TPM4-212ENST00000590180 PEX26Q7Z412 305 aa12.05□□□□□ -0.48
TPM4-212ENST00000590180 NRSN1Q8IZ57 195 aa12.05□□□□□ -0.48
TPM4-212ENST00000590180 SDR16C5Q8N3Y7 309 aa12.05□□□□□ -0.48
TPM4-212ENST00000590180 PDCD7Q8N8D1 485 aaKnown RBP12.05□□□□□ -0.48
TPM4-212ENST00000590180 FAM46DQ8NEK8 389 aa12.05□□□□□ -0.48
TPM4-212ENST00000590180 HTR3CQ8WXA8 447 aa12.05□□□□□ -0.48
TPM4-212ENST00000590180 RIOK2Q9BVS4 552 aaKnown RBP12.05□□□□□ -0.48
TPM4-212ENST00000590180 BOCQ9BWV1 1114 aa12.05□□□□□ -0.48
TPM4-212ENST00000590180 TEX101Q9BY14 249 aa12.05□□□□□ -0.48
TPM4-212ENST00000590180 TMEM168Q9H0V1 697 aa12.05□□□□□ -0.48
TPM4-212ENST00000590180 FAM83DQ9H4H8 585 aa12.05□□□□□ -0.48
TPM4-212ENST00000590180 C10orf88Q9H8K7 445 aa12.05□□□□□ -0.48
TPM4-212ENST00000590180 CARS2Q9HA77 564 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms