RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 ZNF284Q2VY69 593 aa15.16■□□□□ 0.02
ATG4D-211ENST00000589753 HP1BP3Q5SSJ5 553 aaPredicted RBP15.16■□□□□ 0.02
ATG4D-211ENST00000589753 WDR93Q6P2C0 686 aa15.16■□□□□ 0.02
ATG4D-211ENST00000589753 CCNI2Q6ZMN8 369 aaPredicted RBP15.16■□□□□ 0.02
ATG4D-211ENST00000589753 Q6ZVL8 140 aa15.16■□□□□ 0.02
ATG4D-211ENST00000589753 TECPR1Q7Z6L1 1165 aa15.16■□□□□ 0.02
ATG4D-211ENST00000589753 C11orf74Q86VG3 221 aa15.16■□□□□ 0.02
ATG4D-211ENST00000589753 CADM4Q8NFZ8 388 aa15.16■□□□□ 0.02
ATG4D-211ENST00000589753 OR4K2Q8NGD2 314 aa15.16■□□□□ 0.02
ATG4D-211ENST00000589753 OR13C4Q8NGS5 318 aa15.16■□□□□ 0.02
ATG4D-211ENST00000589753 STYXQ8WUJ0 223 aa15.16■□□□□ 0.02
ATG4D-211ENST00000589753 GAB3Q8WWW8 586 aa15.16■□□□□ 0.02
ATG4D-211ENST00000589753 PEX13Q92968 403 aa15.16■□□□□ 0.02
ATG4D-211ENST00000589753 DTD2Q96FN9 168 aa15.16■□□□□ 0.02
ATG4D-211ENST00000589753 DNAJC1Q96KC8 554 aaKnown RBP15.16■□□□□ 0.02
ATG4D-211ENST00000589753 EBNA1BP2Q99848 306 aaKnown RBP15.16■□□□□ 0.02
ATG4D-211ENST00000589753 C19orf43Q9BQ61 176 aa15.16■□□□□ 0.02
ATG4D-211ENST00000589753 NAT9Q9BTE0 207 aa15.16■□□□□ 0.02
ATG4D-211ENST00000589753 C1QTNF2Q9BXJ5 285 aa15.16■□□□□ 0.02
ATG4D-211ENST00000589753 SLC17A9Q9BYT1 436 aa15.16■□□□□ 0.02
ATG4D-211ENST00000589753 RAD18Q9NS91 495 aa15.16■□□□□ 0.02
ATG4D-211ENST00000589753 NLE1Q9NVX2 485 aaPredicted RBP15.16■□□□□ 0.02
ATG4D-211ENST00000589753 KCTD5Q9NXV2 234 aa15.16■□□□□ 0.02
ATG4D-211ENST00000589753 RIMKLBQ9ULI2 386 aa15.16■□□□□ 0.02
ATG4D-211ENST00000589753 CHMP2BQ9UQN3 213 aa15.16■□□□□ 0.02
ATG4D-211ENST00000589753 TEX264Q9Y6I9 313 aa15.16■□□□□ 0.02
ATG4D-211ENST00000589753 EML5Q05BV3 1969 aa15.16■□□□□ 0.02
ATG4D-211ENST00000589753 CACNA1IQ9P0X4 2223 aa15.15■□□□□ 0.02
ATG4D-211ENST00000589753 FAM237BA0A1B0GVD1 139 aa15.15■□□□□ 0.02
ATG4D-211ENST00000589753 IGHV4-34P06331 123 aa15.15■□□□□ 0.02
ATG4D-211ENST00000589753 TUBBP07437 444 aa15.15■□□□□ 0.02
ATG4D-211ENST00000589753 MYBL2P10244 700 aa15.15■□□□□ 0.02
ATG4D-211ENST00000589753 BPIP17213 487 aa15.15■□□□□ 0.02
ATG4D-211ENST00000589753 PGAM1P18669 254 aa15.15■□□□□ 0.02
ATG4D-211ENST00000589753 NMBRP28336 390 aa15.15■□□□□ 0.02
ATG4D-211ENST00000589753 CNR2P34972 360 aa15.15■□□□□ 0.02
ATG4D-211ENST00000589753 HADHAP40939 763 aa15.15■□□□□ 0.02
ATG4D-211ENST00000589753 TMPRSS15P98073 1019 aa15.15■□□□□ 0.02
ATG4D-211ENST00000589753 AGERQ15109 404 aa15.15■□□□□ 0.02
ATG4D-211ENST00000589753 ELF2Q15723 593 aa15.15■□□□□ 0.02
ATG4D-211ENST00000589753 ZDHHC20Q5W0Z9 365 aa15.15■□□□□ 0.02
ATG4D-211ENST00000589753 RFLNAQ6ZTI6 216 aa15.15■□□□□ 0.02
ATG4D-211ENST00000589753 CYP2U1Q7Z449 544 aa15.15■□□□□ 0.02
ATG4D-211ENST00000589753 CCNJLQ8IV13 435 aa15.15■□□□□ 0.02
ATG4D-211ENST00000589753 ANKMY2Q8IV38 441 aa15.15■□□□□ 0.02
ATG4D-211ENST00000589753 IGDCC3Q8IVU1 814 aa15.15■□□□□ 0.02
ATG4D-211ENST00000589753 GSPT2Q8IYD1 628 aaKnown RBP15.15■□□□□ 0.02
ATG4D-211ENST00000589753 NRSN1Q8IZ57 195 aa15.15■□□□□ 0.02
ATG4D-211ENST00000589753 FBXO36Q8NEA4 188 aa15.15■□□□□ 0.02
ATG4D-211ENST00000589753 PYROXD1Q8WU10 500 aa15.15■□□□□ 0.02
ATG4D-211ENST00000589753 ASB12Q8WXK4 309 aa15.15■□□□□ 0.02
ATG4D-211ENST00000589753 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.15■□□□□ 0.02
ATG4D-211ENST00000589753 KLK6Q92876 244 aa15.15■□□□□ 0.02
ATG4D-211ENST00000589753 NUS1Q96E22 293 aa15.15■□□□□ 0.02
ATG4D-211ENST00000589753 ZNF778Q96MU6 729 aa15.15■□□□□ 0.02
ATG4D-211ENST00000589753 WDR83Q9BRX9 315 aaKnown RBP15.15■□□□□ 0.02
ATG4D-211ENST00000589753 C1QTNF7Q9BXJ2 289 aa15.15■□□□□ 0.02
ATG4D-211ENST00000589753 PARD6BQ9BYG5 372 aa15.15■□□□□ 0.02
ATG4D-211ENST00000589753 CDH19Q9H159 772 aa15.15■□□□□ 0.02
ATG4D-211ENST00000589753 ZC3H7BQ9UGR2 993 aaKnown RBP15.15■□□□□ 0.02
ATG4D-211ENST00000589753 CD84Q9UIB8 345 aa15.15■□□□□ 0.02
ATG4D-211ENST00000589753 METTL12A8MUP2 240 aa15.14■□□□□ 0.01
ATG4D-211ENST00000589753 LATO43561 262 aa15.14■□□□□ 0.01
ATG4D-211ENST00000589753 HRO43593 1189 aa15.14■□□□□ 0.01
ATG4D-211ENST00000589753 USP1O94782 785 aa15.14■□□□□ 0.01
ATG4D-211ENST00000589753 PAK4O96013 591 aaPredicted RBP15.14■□□□□ 0.01
ATG4D-211ENST00000589753 POLBP06746 335 aa15.14■□□□□ 0.01
ATG4D-211ENST00000589753 PSMA3P25788 255 aa15.14■□□□□ 0.01
ATG4D-211ENST00000589753 SPAM1P38567 509 aa15.14■□□□□ 0.01
ATG4D-211ENST00000589753 MAGEA4P43358 317 aa15.14■□□□□ 0.01
ATG4D-211ENST00000589753 PTPN5P54829 565 aa15.14■□□□□ 0.01
ATG4D-211ENST00000589753 ACVR1Q04771 509 aa15.14■□□□□ 0.01
ATG4D-211ENST00000589753 SRSF5Q13243 272 aaKnown RBP15.14■□□□□ 0.01
ATG4D-211ENST00000589753 FGL2Q14314 439 aa15.14■□□□□ 0.01
ATG4D-211ENST00000589753 FASTKD3Q14CZ7 662 aaKnown RBP15.14■□□□□ 0.01
ATG4D-211ENST00000589753 SETMARQ53H47 684 aaPredicted RBP15.14■□□□□ 0.01
ATG4D-211ENST00000589753 ESRP1Q6NXG1 681 aaKnown RBP15.14■□□□□ 0.01
ATG4D-211ENST00000589753 CES3Q6UWW8 571 aa15.14■□□□□ 0.01
ATG4D-211ENST00000589753 ZNF765Q7L2R6 523 aa15.14■□□□□ 0.01
ATG4D-211ENST00000589753 LPCAT2Q7L5N7 544 aa15.14■□□□□ 0.01
ATG4D-211ENST00000589753 TMEM135Q86UB9 458 aa15.14■□□□□ 0.01
ATG4D-211ENST00000589753 DEFB119Q8N690 84 aa15.14■□□□□ 0.01
ATG4D-211ENST00000589753 ZBTB44Q8NCP5 570 aa15.14■□□□□ 0.01
ATG4D-211ENST00000589753 GPR26Q8NDV2 337 aa15.14■□□□□ 0.01
ATG4D-211ENST00000589753 MYRIPQ8NFW9 859 aa15.14■□□□□ 0.01
ATG4D-211ENST00000589753 OR13J1Q8NGT2 312 aa15.14■□□□□ 0.01
ATG4D-211ENST00000589753 FOXJ1Q92949 421 aa15.14■□□□□ 0.01
ATG4D-211ENST00000589753 ZNF669Q96BR6 464 aaPredicted RBP15.14■□□□□ 0.01
ATG4D-211ENST00000589753 BIRC7Q96CA5 298 aa15.14■□□□□ 0.01
ATG4D-211ENST00000589753 MFSD3Q96ES6 412 aa15.14■□□□□ 0.01
ATG4D-211ENST00000589753 PLEKHG4BQ96PX9 1271 aa15.14■□□□□ 0.01
ATG4D-211ENST00000589753 TRIM56Q9BRZ2 755 aaKnown RBP15.14■□□□□ 0.01
ATG4D-211ENST00000589753 DUSP15Q9H1R2 295 aaPredicted RBP15.14■□□□□ 0.01
ATG4D-211ENST00000589753 ABCG8Q9H221 673 aa15.14■□□□□ 0.01
ATG4D-211ENST00000589753 FAM83DQ9H4H8 585 aa15.14■□□□□ 0.01
ATG4D-211ENST00000589753 TREX1Q9NSU2 369 aa15.14■□□□□ 0.01
ATG4D-211ENST00000589753 NFKBIL1Q9UBC1 381 aaPredicted RBP15.14■□□□□ 0.01
ATG4D-211ENST00000589753 SLC2A6Q9UGQ3 507 aa15.14■□□□□ 0.01
ATG4D-211ENST00000589753 FKBPLQ9UIM3 349 aa15.14■□□□□ 0.01
ATG4D-211ENST00000589753 FNDC3AQ9Y2H6 1198 aaKnown RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms