RNA–Protein interactions for RNA: ENST00000589528.1

ACTN4-211, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-211ENST00000589528 UNGP13051 313 aaPredicted RBP15.21■□□□□ 0.03
ACTN4-211ENST00000589528 TSPAN7P41732 249 aa15.21■□□□□ 0.03
ACTN4-211ENST00000589528 ARSDP51689 593 aa15.21■□□□□ 0.03
ACTN4-211ENST00000589528 AP1S1P61966 158 aa15.21■□□□□ 0.03
ACTN4-211ENST00000589528 GPLD1P80108 840 aa15.21■□□□□ 0.03
ACTN4-211ENST00000589528 CDK3Q00526 305 aa15.21■□□□□ 0.03
ACTN4-211ENST00000589528 NSUN2Q08J23 767 aaKnown RBP eCLIP15.21■□□□□ 0.03
ACTN4-211ENST00000589528 CDC20Q12834 499 aa15.21■□□□□ 0.03
ACTN4-211ENST00000589528 RFTN1Q14699 578 aaPredicted RBP15.21■□□□□ 0.03
ACTN4-211ENST00000589528 SNAP47Q5SQN1 464 aa15.21■□□□□ 0.03
ACTN4-211ENST00000589528 ANKS6Q68DC2 871 aa15.21■□□□□ 0.03
ACTN4-211ENST00000589528 TMEM71Q6P5X7 295 aa15.21■□□□□ 0.03
ACTN4-211ENST00000589528 DOK6Q6PKX4 331 aa15.21■□□□□ 0.03
ACTN4-211ENST00000589528 NAGSQ8N159 534 aa15.21■□□□□ 0.03
ACTN4-211ENST00000589528 FAM26EQ8N5C1 309 aa15.21■□□□□ 0.03
ACTN4-211ENST00000589528 OR10G6Q8NH81 332 aa15.21■□□□□ 0.03
ACTN4-211ENST00000589528 APOBEC4Q8WW27 367 aaKnown RBP15.21■□□□□ 0.03
ACTN4-211ENST00000589528 COQ10AQ96MF6 247 aa15.21■□□□□ 0.03
ACTN4-211ENST00000589528 SLC38A3Q99624 504 aa15.21■□□□□ 0.03
ACTN4-211ENST00000589528 CNPY3Q9BT09 278 aa15.21■□□□□ 0.03
ACTN4-211ENST00000589528 TEX101Q9BY14 249 aa15.21■□□□□ 0.03
ACTN4-211ENST00000589528 VPS16Q9H269 839 aa15.21■□□□□ 0.03
ACTN4-211ENST00000589528 GANQ9H2C0 597 aa15.21■□□□□ 0.03
ACTN4-211ENST00000589528 FAM207AQ9NSI2 230 aaPredicted RBP15.21■□□□□ 0.03
ACTN4-211ENST00000589528 GPATCH2LQ9NWQ4 482 aa15.21■□□□□ 0.03
ACTN4-211ENST00000589528 AP4E1Q9UPM8 1137 aa15.21■□□□□ 0.03
ACTN4-211ENST00000589528 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.2■□□□□ 0.02
ACTN4-211ENST00000589528 PPM1DO15297 605 aa15.2■□□□□ 0.02
ACTN4-211ENST00000589528 NKX2-8O15522 239 aa15.2■□□□□ 0.02
ACTN4-211ENST00000589528 DUX1O43812 170 aa15.2■□□□□ 0.02
ACTN4-211ENST00000589528 CPP00450 1065 aa15.2■□□□□ 0.02
ACTN4-211ENST00000589528 CYP2A6P11509 494 aaPredicted RBP15.2■□□□□ 0.02
ACTN4-211ENST00000589528 GM2AP17900 193 aa15.2■□□□□ 0.02
ACTN4-211ENST00000589528 MAP4P27816 1152 aaKnown RBP15.2■□□□□ 0.02
ACTN4-211ENST00000589528 VIPR1P32241 457 aa15.2■□□□□ 0.02
ACTN4-211ENST00000589528 CSF2RBP32927 897 aa15.2■□□□□ 0.02
ACTN4-211ENST00000589528 ADCY8P40145 1251 aa15.2■□□□□ 0.02
ACTN4-211ENST00000589528 MC1RQ01726 317 aa15.2■□□□□ 0.02
ACTN4-211ENST00000589528 PTP4A2Q12974 167 aa15.2■□□□□ 0.02
ACTN4-211ENST00000589528 CLEC16AQ2KHT3 1053 aa15.2■□□□□ 0.02
ACTN4-211ENST00000589528 DEFB109BQ30KR1 87 aa15.2■□□□□ 0.02
ACTN4-211ENST00000589528 LACTB2Q53H82 288 aaPredicted RBP15.2■□□□□ 0.02
ACTN4-211ENST00000589528 TCP11X2Q5H9J9 407 aa15.2■□□□□ 0.02
ACTN4-211ENST00000589528 CEACAM20Q6UY09 585 aa15.2■□□□□ 0.02
ACTN4-211ENST00000589528 PHF13Q86YI8 300 aaPredicted RBP15.2■□□□□ 0.02
ACTN4-211ENST00000589528 FRMD8Q9BZ67 464 aaPredicted RBP15.2■□□□□ 0.02
ACTN4-211ENST00000589528 DHX35Q9H5Z1 703 aaKnown RBP15.2■□□□□ 0.02
ACTN4-211ENST00000589528 TAB2Q9NYJ8 693 aa15.2■□□□□ 0.02
ACTN4-211ENST00000589528 TMEM9Q9P0T7 183 aa15.2■□□□□ 0.02
ACTN4-211ENST00000589528 PILRAQ9UKJ1 303 aa15.2■□□□□ 0.02
ACTN4-211ENST00000589528 MAN2B2Q9Y2E5 1009 aa15.2■□□□□ 0.02
ACTN4-211ENST00000589528 A0A1W2PQ67 120 aa15.19■□□□□ 0.02
ACTN4-211ENST00000589528 A8MU76 341 aa15.19■□□□□ 0.02
ACTN4-211ENST00000589528 TRAFD1O14545 582 aaPredicted RBP15.19■□□□□ 0.02
ACTN4-211ENST00000589528 IVLP07476 585 aa15.19■□□□□ 0.02
ACTN4-211ENST00000589528 EEF1GP26641 437 aaKnown RBP15.19■□□□□ 0.02
ACTN4-211ENST00000589528 ETV3P41162 512 aa15.19■□□□□ 0.02
ACTN4-211ENST00000589528 POLD2P49005 469 aa15.19■□□□□ 0.02
ACTN4-211ENST00000589528 COPB1P53618 953 aaKnown RBP15.19■□□□□ 0.02
ACTN4-211ENST00000589528 UBE2HP62256 183 aa15.19■□□□□ 0.02
ACTN4-211ENST00000589528 RPL7AP62424 266 aaKnown RBP15.19■□□□□ 0.02
ACTN4-211ENST00000589528 IL10RBQ08334 325 aa15.19■□□□□ 0.02
ACTN4-211ENST00000589528 SQSTM1Q13501 440 aa15.19■□□□□ 0.02
ACTN4-211ENST00000589528 ZNF235Q14590 738 aa15.19■□□□□ 0.02
ACTN4-211ENST00000589528 CNGA3Q16281 694 aa15.19■□□□□ 0.02
ACTN4-211ENST00000589528 DPCR1Q3MIW9 517 aa15.19■□□□□ 0.02
ACTN4-211ENST00000589528 C4orf17Q53FE4 359 aa15.19■□□□□ 0.02
ACTN4-211ENST00000589528 FKBP15Q5T1M5 1219 aa15.19■□□□□ 0.02
ACTN4-211ENST00000589528 ATCAYQ86WG3 371 aa15.19■□□□□ 0.02
ACTN4-211ENST00000589528 ZNF761Q86XN6 746 aaPredicted RBP15.19■□□□□ 0.02
ACTN4-211ENST00000589528 DTD2Q96FN9 168 aa15.19■□□□□ 0.02
ACTN4-211ENST00000589528 ABHD17AQ96GS6 310 aa15.19■□□□□ 0.02
ACTN4-211ENST00000589528 PCMTD1Q96MG8 357 aaPredicted RBP15.19■□□□□ 0.02
ACTN4-211ENST00000589528 OR2M4Q96R27 311 aa15.19■□□□□ 0.02
ACTN4-211ENST00000589528 PCDHB18PQ96TA0 734 aa15.19■□□□□ 0.02
ACTN4-211ENST00000589528 CTRCQ99895 268 aa15.19■□□□□ 0.02
ACTN4-211ENST00000589528 ZPBPQ9BS86 351 aa15.19■□□□□ 0.02
ACTN4-211ENST00000589528 LRRC4CQ9HCJ2 640 aa15.19■□□□□ 0.02
ACTN4-211ENST00000589528 SAMSN1Q9NSI8 373 aaKnown RBP15.19■□□□□ 0.02
ACTN4-211ENST00000589528 SPTBN1Q01082 2364 aaKnown RBP15.18■□□□□ 0.02
ACTN4-211ENST00000589528 TRBV23OR9-2A0A075B6M9 112 aa15.18■□□□□ 0.02
ACTN4-211ENST00000589528 EIF3CLB5ME19 914 aaKnown RBP15.18■□□□□ 0.02
ACTN4-211ENST00000589528 HEXIM1O94992 359 aaKnown RBP15.18■□□□□ 0.02
ACTN4-211ENST00000589528 FUCA1P04066 466 aa15.18■□□□□ 0.02
ACTN4-211ENST00000589528 TCN2P20062 427 aa15.18■□□□□ 0.02
ACTN4-211ENST00000589528 GPR1P46091 355 aa15.18■□□□□ 0.02
ACTN4-211ENST00000589528 KLK7P49862 253 aa15.18■□□□□ 0.02
ACTN4-211ENST00000589528 JAM2P57087 298 aa15.18■□□□□ 0.02
ACTN4-211ENST00000589528 LBRQ14739 615 aaKnown RBP15.18■□□□□ 0.02
ACTN4-211ENST00000589528 TMCO4Q5TGY1 634 aa15.18■□□□□ 0.02
ACTN4-211ENST00000589528 C16orf46Q6P387 395 aa15.18■□□□□ 0.02
ACTN4-211ENST00000589528 MON1BQ7L1V2 547 aa15.18■□□□□ 0.02
ACTN4-211ENST00000589528 UNC5BQ8IZJ1 945 aa15.18■□□□□ 0.02
ACTN4-211ENST00000589528 STARD8Q92502 1023 aa15.18■□□□□ 0.02
ACTN4-211ENST00000589528 RTP4Q96DX8 246 aa15.18■□□□□ 0.02
ACTN4-211ENST00000589528 EIF3CQ99613 913 aaKnown RBP15.18■□□□□ 0.02
ACTN4-211ENST00000589528 TRIT1Q9H3H1 467 aaKnown RBP15.18■□□□□ 0.02
ACTN4-211ENST00000589528 STN1Q9H668 368 aaKnown RBP15.18■□□□□ 0.02
ACTN4-211ENST00000589528 PLAAQ9Y263 795 aa15.18■□□□□ 0.02
ACTN4-211ENST00000589528 SLC17A4Q9Y2C5 497 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms