RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	DENND6A	Q8IWF6	608 aa		15.43	■□□□□ 0.06
DDX39A-209	ENST00000589318	ADGRG2	Q8IZP9	1017 aa		15.43	■□□□□ 0.06
DDX39A-209	ENST00000589318	DCLK2	Q8N568	766 aa		15.43	■□□□□ 0.06
DDX39A-209	ENST00000589318	ACVR1C	Q8NER5	493 aa		15.43	■□□□□ 0.06
DDX39A-209	ENST00000589318	ACMSD	Q8TDX5	336 aa		15.43	■□□□□ 0.06
DDX39A-209	ENST00000589318	RSPRY1	Q96DX4	576 aa		15.43	■□□□□ 0.06
DDX39A-209	ENST00000589318	ECSIT	Q9BQ95	431 aa		15.43	■□□□□ 0.06
DDX39A-209	ENST00000589318	IQCG	Q9H095	443 aa	Known RBP	15.43	■□□□□ 0.06
DDX39A-209	ENST00000589318	SFXN1	Q9H9B4	322 aa		15.43	■□□□□ 0.06
DDX39A-209	ENST00000589318	NSMCE4A	Q9NXX6	385 aa		15.43	■□□□□ 0.06
DDX39A-209	ENST00000589318	TBC1D14	Q9P2M4	693 aa		15.43	■□□□□ 0.06
DDX39A-209	ENST00000589318	MSRA	Q9UJ68	235 aa		15.43	■□□□□ 0.06
DDX39A-209	ENST00000589318	RAI2	Q9Y5P3	530 aa		15.43	■□□□□ 0.06
DDX39A-209	ENST00000589318	WNT6	Q9Y6F9	365 aa		15.43	■□□□□ 0.06
DDX39A-209	ENST00000589318	NEDD8-MDP1	E9PL57	170 aa		15.42	■□□□□ 0.06
DDX39A-209	ENST00000589318	AHSG	P02765	367 aa		15.42	■□□□□ 0.06
DDX39A-209	ENST00000589318	CSRP3	P50461	194 aa		15.42	■□□□□ 0.06
DDX39A-209	ENST00000589318	SLC12A1	Q13621	1099 aa		15.42	■□□□□ 0.06
DDX39A-209	ENST00000589318	PDE1C	Q14123	709 aa	Predicted RBP	15.42	■□□□□ 0.06
DDX39A-209	ENST00000589318	RAB30	Q15771	203 aa		15.42	■□□□□ 0.06
DDX39A-209	ENST00000589318	TRMT5	Q32P41	509 aa	Known RBP	15.42	■□□□□ 0.06
DDX39A-209	ENST00000589318	FUT11	Q495W5	492 aa		15.42	■□□□□ 0.06
DDX39A-209	ENST00000589318	LY6G5C	Q5SRR4	150 aa		15.42	■□□□□ 0.06
DDX39A-209	ENST00000589318	NET1	Q7Z628	596 aa	Predicted RBP	15.42	■□□□□ 0.06
DDX39A-209	ENST00000589318	NDUFAF2	Q8N183	169 aa		15.42	■□□□□ 0.06
DDX39A-209	ENST00000589318	BRSK1	Q8TDC3	778 aa		15.42	■□□□□ 0.06
DDX39A-209	ENST00000589318	BLOC1S5	Q8TDH9	187 aa		15.42	■□□□□ 0.06
DDX39A-209	ENST00000589318	VOPP1	Q96AW1	172 aa		15.42	■□□□□ 0.06
DDX39A-209	ENST00000589318	ATXN7L3B	Q96GX2	97 aa		15.42	■□□□□ 0.06
DDX39A-209	ENST00000589318	VPS39	Q96JC1	886 aa		15.42	■□□□□ 0.06
DDX39A-209	ENST00000589318	FAM111A	Q96PZ2	611 aa		15.42	■□□□□ 0.06
DDX39A-209	ENST00000589318	SMIM14	Q96QK8	99 aa		15.42	■□□□□ 0.06
DDX39A-209	ENST00000589318	BBS2	Q9BXC9	721 aa		15.42	■□□□□ 0.06
DDX39A-209	ENST00000589318	SLC13A1	Q9BZW2	595 aa		15.42	■□□□□ 0.06
DDX39A-209	ENST00000589318	TIMMDC1	Q9NPL8	285 aa		15.42	■□□□□ 0.06
DDX39A-209	ENST00000589318	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	15.42	■□□□□ 0.06
DDX39A-209	ENST00000589318	PLLP	Q9Y342	182 aa		15.42	■□□□□ 0.06
DDX39A-209	ENST00000589318	SPO11	Q9Y5K1	396 aa		15.42	■□□□□ 0.06
DDX39A-209	ENST00000589318	ARL5A	Q9Y689	179 aa		15.42	■□□□□ 0.06
DDX39A-209	ENST00000589318	CXorf51A	A0A1B0GTR3	108 aa		15.41	■□□□□ 0.06
DDX39A-209	ENST00000589318	RFXAP	O00287	272 aa		15.41	■□□□□ 0.06
DDX39A-209	ENST00000589318	FZD6	O60353	706 aa		15.41	■□□□□ 0.06
DDX39A-209	ENST00000589318	GLP2R	O95838	553 aa		15.41	■□□□□ 0.06
DDX39A-209	ENST00000589318	TYR	P14679	529 aa		15.41	■□□□□ 0.06
DDX39A-209	ENST00000589318	WEE1	P30291	646 aa		15.41	■□□□□ 0.06
DDX39A-209	ENST00000589318	CRHR1	P34998	444 aa		15.41	■□□□□ 0.06
DDX39A-209	ENST00000589318	SLC1A2	P43004	574 aa		15.41	■□□□□ 0.06
DDX39A-209	ENST00000589318	CTSO	P43234	321 aa	Predicted RBP	15.41	■□□□□ 0.06
DDX39A-209	ENST00000589318	MPP1	Q00013	466 aa		15.41	■□□□□ 0.06
DDX39A-209	ENST00000589318	CTBP1	Q13363	440 aa		15.41	■□□□□ 0.06
DDX39A-209	ENST00000589318	GRM2	Q14416	872 aa		15.41	■□□□□ 0.06
DDX39A-209	ENST00000589318	RALGPS1	Q5JS13	557 aa		15.41	■□□□□ 0.06
DDX39A-209	ENST00000589318	SPATA24	Q86W54	205 aa		15.41	■□□□□ 0.06
DDX39A-209	ENST00000589318	C2CD4A	Q8NCU7	369 aa	Predicted RBP	15.41	■□□□□ 0.06
DDX39A-209	ENST00000589318	SPOCK2	Q92563	424 aa		15.41	■□□□□ 0.06
DDX39A-209	ENST00000589318	PEX13	Q92968	403 aa		15.41	■□□□□ 0.06
DDX39A-209	ENST00000589318	OTUB2	Q96DC9	234 aa		15.41	■□□□□ 0.06
DDX39A-209	ENST00000589318	GPR22	Q99680	433 aa		15.41	■□□□□ 0.06
DDX39A-209	ENST00000589318	TM6SF2	Q9BZW4	377 aa		15.41	■□□□□ 0.06
DDX39A-209	ENST00000589318	MARK1	Q9P0L2	795 aa		15.41	■□□□□ 0.06
DDX39A-209	ENST00000589318	CCL22	O00626	93 aa		15.41	■□□□□ 0.06
DDX39A-209	ENST00000589318	AURKA	O14965	403 aa		15.41	■□□□□ 0.06
DDX39A-209	ENST00000589318	FKBP6	O75344	327 aa		15.41	■□□□□ 0.06
DDX39A-209	ENST00000589318	UBTFL6	P0CB48	400 aa	Predicted RBP	15.41	■□□□□ 0.06
DDX39A-209	ENST00000589318	IDO1	P14902	403 aa		15.41	■□□□□ 0.06
DDX39A-209	ENST00000589318	PDE1B	Q01064	536 aa		15.41	■□□□□ 0.06
DDX39A-209	ENST00000589318	PTPRCAP	Q14761	206 aa		15.41	■□□□□ 0.06
DDX39A-209	ENST00000589318	ZNF470	Q6ECI4	717 aa		15.41	■□□□□ 0.06
DDX39A-209	ENST00000589318	NEPRO	Q6NW34	567 aa		15.41	■□□□□ 0.06
DDX39A-209	ENST00000589318	CMC1	Q7Z7K0	106 aa		15.41	■□□□□ 0.06
DDX39A-209	ENST00000589318	NPAS3	Q8IXF0	933 aa		15.41	■□□□□ 0.06
DDX39A-209	ENST00000589318	DGCR14	Q96DF8	476 aa	Known RBP	15.41	■□□□□ 0.06
DDX39A-209	ENST00000589318	RHOJ	Q9H4E5	214 aa		15.41	■□□□□ 0.06
DDX39A-209	ENST00000589318	SLC28A3	Q9HAS3	691 aa		15.41	■□□□□ 0.06
DDX39A-209	ENST00000589318	SNX15	Q9NRS6	342 aa		15.41	■□□□□ 0.06
DDX39A-209	ENST00000589318	CDH22	Q9UJ99	828 aa		15.41	■□□□□ 0.06
DDX39A-209	ENST00000589318	RIMKLB	Q9ULI2	386 aa		15.41	■□□□□ 0.06
DDX39A-209	ENST00000589318	SZT2	Q5T011	3432 aa		15.41	■□□□□ 0.06
DDX39A-209	ENST00000589318	KIF26A	Q9ULI4	1882 aa	Predicted RBP	15.4	■□□□□ 0.06
DDX39A-209	ENST00000589318	CCDC85C	A6NKD9	419 aa		15.4	■□□□□ 0.06
DDX39A-209	ENST00000589318	SLC7A4	O43246	635 aa		15.4	■□□□□ 0.06
DDX39A-209	ENST00000589318	TIMM44	O43615	452 aa		15.4	■□□□□ 0.06
DDX39A-209	ENST00000589318	BUD23	O43709	281 aa	Known RBP	15.4	■□□□□ 0.06
DDX39A-209	ENST00000589318	ATP6V1G1	O75348	118 aa		15.4	■□□□□ 0.06
DDX39A-209	ENST00000589318	CIB2	O75838	187 aa		15.4	■□□□□ 0.06
DDX39A-209	ENST00000589318	TGDS	O95455	350 aa		15.4	■□□□□ 0.06
DDX39A-209	ENST00000589318	BMP1	P13497	986 aa		15.4	■□□□□ 0.06
DDX39A-209	ENST00000589318	GMPR	P36959	345 aa		15.4	■□□□□ 0.06
DDX39A-209	ENST00000589318	STK19	P49842	368 aa	Predicted RBP	15.4	■□□□□ 0.06
DDX39A-209	ENST00000589318	GRM3	Q14832	879 aa		15.4	■□□□□ 0.06
DDX39A-209	ENST00000589318	PPM1J	Q5JR12	505 aa		15.4	■□□□□ 0.06
DDX39A-209	ENST00000589318	DGKK	Q5KSL6	1271 aa		15.4	■□□□□ 0.06
DDX39A-209	ENST00000589318	MTDH	Q86UE4	582 aa	Known RBP	15.4	■□□□□ 0.06
DDX39A-209	ENST00000589318	MFSD6L	Q8IWD5	586 aa		15.4	■□□□□ 0.06
DDX39A-209	ENST00000589318	CELF5	Q8N6W0	485 aa	Known RBP	15.4	■□□□□ 0.06
DDX39A-209	ENST00000589318	MDGA1	Q8NFP4	955 aa		15.4	■□□□□ 0.06
DDX39A-209	ENST00000589318	OR13C4	Q8NGS5	318 aa		15.4	■□□□□ 0.06
DDX39A-209	ENST00000589318	HDAC10	Q969S8	669 aa		15.4	■□□□□ 0.06
DDX39A-209	ENST00000589318	RMDN1	Q96DB5	314 aa		15.4	■□□□□ 0.06
DDX39A-209	ENST00000589318	DNAJC1	Q96KC8	554 aa	Known RBP	15.4	■□□□□ 0.06

Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms