RNA–Protein interactions for RNA: ENST00000588230.5

CIRBP-217, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5 BASIC

Gene CIRBP, Length 1,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-217ENST00000588230 TMPRSS7Q7RTY8 843 aa19.19■□□□□ 0.66
CIRBP-217ENST00000588230 HID1Q8IV36 788 aa19.19■□□□□ 0.66
CIRBP-217ENST00000588230 CDKL3Q8IVW4 592 aaPredicted RBP19.19■□□□□ 0.66
CIRBP-217ENST00000588230 ZNF548Q8NEK5 533 aaPredicted RBP19.19■□□□□ 0.66
CIRBP-217ENST00000588230 SPATA22Q8NHS9 363 aa19.19■□□□□ 0.66
CIRBP-217ENST00000588230 LMX1AQ8TE12 382 aa19.19■□□□□ 0.66
CIRBP-217ENST00000588230 UBE2Q2Q8WVN8 375 aa19.19■□□□□ 0.66
CIRBP-217ENST00000588230 HES6Q96HZ4 224 aa19.19■□□□□ 0.66
CIRBP-217ENST00000588230 WDR92Q96MX6 357 aa19.19■□□□□ 0.66
CIRBP-217ENST00000588230 WDR26Q9H7D7 661 aa19.19■□□□□ 0.66
CIRBP-217ENST00000588230 APOBEC3BQ9UH17 382 aaKnown RBP19.19■□□□□ 0.66
CIRBP-217ENST00000588230 TRHDEQ9UKU6 1024 aa19.19■□□□□ 0.66
CIRBP-217ENST00000588230 GOLGA6CA6NDK9 693 aa19.18■□□□□ 0.66
CIRBP-217ENST00000588230 GOLGA6BA6NDN3 693 aa19.18■□□□□ 0.66
CIRBP-217ENST00000588230 TRIM38O00635 465 aa19.18■□□□□ 0.66
CIRBP-217ENST00000588230 SCAMP1O15126 338 aa19.18■□□□□ 0.66
CIRBP-217ENST00000588230 AQP9O43315 295 aa19.18■□□□□ 0.66
CIRBP-217ENST00000588230 SIGLEC6O43699 453 aa19.18■□□□□ 0.66
CIRBP-217ENST00000588230 RASGRP1O95267 797 aa19.18■□□□□ 0.66
CIRBP-217ENST00000588230 MT-CYBP00156 380 aaPredicted RBP19.18■□□□□ 0.66
CIRBP-217ENST00000588230 GOLGA6DP0CG33 693 aa19.18■□□□□ 0.66
CIRBP-217ENST00000588230 RBP3P10745 1247 aa19.18■□□□□ 0.66
CIRBP-217ENST00000588230 TSHRP16473 764 aa19.18■□□□□ 0.66
CIRBP-217ENST00000588230 NFKB1P19838 968 aa19.18■□□□□ 0.66
CIRBP-217ENST00000588230 KELP23276 732 aa19.18■□□□□ 0.66
CIRBP-217ENST00000588230 RBL1P28749 1068 aa19.18■□□□□ 0.66
CIRBP-217ENST00000588230 CD68P34810 354 aaPredicted RBP19.18■□□□□ 0.66
CIRBP-217ENST00000588230 TRIM23P36406 574 aa19.18■□□□□ 0.66
CIRBP-217ENST00000588230 ACADVLP49748 655 aa19.18■□□□□ 0.66
CIRBP-217ENST00000588230 KIAA1024LP59773 190 aa19.18■□□□□ 0.66
CIRBP-217ENST00000588230 CCZ1BP86790 482 aa19.18■□□□□ 0.66
CIRBP-217ENST00000588230 CCZ1P86791 482 aaPredicted RBP19.18■□□□□ 0.66
CIRBP-217ENST00000588230 PTSQ03393 145 aa19.18■□□□□ 0.66
CIRBP-217ENST00000588230 GALNT3Q14435 633 aa19.18■□□□□ 0.66
CIRBP-217ENST00000588230 SMAD1Q15797 465 aaKnown RBP19.18■□□□□ 0.66
CIRBP-217ENST00000588230 PRRT3Q5FWE3 981 aa19.18■□□□□ 0.66
CIRBP-217ENST00000588230 DARS2Q6PI48 645 aaKnown RBP19.18■□□□□ 0.66
CIRBP-217ENST00000588230 RD3Q7Z3Z2 195 aa19.18■□□□□ 0.66
CIRBP-217ENST00000588230 TECPR1Q7Z6L1 1165 aa19.18■□□□□ 0.66
CIRBP-217ENST00000588230 MARCH9Q86YJ5 346 aa19.18■□□□□ 0.66
CIRBP-217ENST00000588230 RBFAQ8N0V3 343 aa19.18■□□□□ 0.66
CIRBP-217ENST00000588230 ZNF567Q8N184 647 aa19.18■□□□□ 0.66
CIRBP-217ENST00000588230 OR4C6Q8NH72 309 aa19.18■□□□□ 0.66
CIRBP-217ENST00000588230 TSACCQ96A04 125 aaPredicted RBP19.18■□□□□ 0.66
CIRBP-217ENST00000588230 FUBP1Q96AE4 644 aaKnown RBP19.18■□□□□ 0.66
CIRBP-217ENST00000588230 TADA1Q96BN2 335 aa19.18■□□□□ 0.66
CIRBP-217ENST00000588230 LYSMD1Q96S90 227 aa19.18■□□□□ 0.66
CIRBP-217ENST00000588230 FAM118BQ9BPY3 351 aa19.18■□□□□ 0.66
CIRBP-217ENST00000588230 TCEAL2Q9H3H9 227 aaPredicted RBP19.18■□□□□ 0.66
CIRBP-217ENST00000588230 C10orf88Q9H8K7 445 aa19.18■□□□□ 0.66
CIRBP-217ENST00000588230 LZTFL1Q9NQ48 299 aa19.18■□□□□ 0.66
CIRBP-217ENST00000588230 GOLGA6AQ9NYA3 693 aa19.18■□□□□ 0.66
CIRBP-217ENST00000588230 UBP1Q9NZI7 540 aa19.18■□□□□ 0.66
CIRBP-217ENST00000588230 KLQ9UEF7 1012 aa19.18■□□□□ 0.66
CIRBP-217ENST00000588230 CSNK1G3Q9Y6M4 447 aa19.18■□□□□ 0.66
CIRBP-217ENST00000588230 ANKRD11Q6UB99 2663 aaPredicted RBP19.18■□□□□ 0.66
CIRBP-217ENST00000588230 C1orf232A0A0U1RR37 186 aa19.17■□□□□ 0.66
CIRBP-217ENST00000588230 TMEM8BA6NDV4 472 aa19.17■□□□□ 0.66
CIRBP-217ENST00000588230 K7ESM1 405 aa19.17■□□□□ 0.66
CIRBP-217ENST00000588230 PDE2AO00408 941 aaPredicted RBP19.17■□□□□ 0.66
CIRBP-217ENST00000588230 STK10O94804 968 aaKnown RBP19.17■□□□□ 0.66
CIRBP-217ENST00000588230 CLDN7O95471 211 aa19.17■□□□□ 0.66
CIRBP-217ENST00000588230 HOXC4P09017 264 aaPredicted RBP19.17■□□□□ 0.66
CIRBP-217ENST00000588230 TNNT3P45378 269 aaPredicted RBP19.17■□□□□ 0.66
CIRBP-217ENST00000588230 STC1P52823 247 aa19.17■□□□□ 0.66
CIRBP-217ENST00000588230 SRP54P61011 504 aaKnown RBP19.17■□□□□ 0.66
CIRBP-217ENST00000588230 C1orf61Q13536 156 aa19.17■□□□□ 0.66
CIRBP-217ENST00000588230 ALG11Q2TAA5 492 aa19.17■□□□□ 0.66
CIRBP-217ENST00000588230 PROX2Q3B8N5 592 aa19.17■□□□□ 0.66
CIRBP-217ENST00000588230 ZNF662Q6ZS27 426 aa19.17■□□□□ 0.66
CIRBP-217ENST00000588230 PELI3Q8N2H9 469 aa19.17■□□□□ 0.66
CIRBP-217ENST00000588230 TTC13Q8NBP0 860 aa19.17■□□□□ 0.66
CIRBP-217ENST00000588230 CCHCR1Q8TD31 782 aa19.17■□□□□ 0.66
CIRBP-217ENST00000588230 AP2M1Q96CW1 435 aa19.17■□□□□ 0.66
CIRBP-217ENST00000588230 TRIB3Q96RU7 358 aa19.17■□□□□ 0.66
CIRBP-217ENST00000588230 DUSP23Q9BVJ7 150 aa19.17■□□□□ 0.66
CIRBP-217ENST00000588230 ABCG8Q9H221 673 aa19.17■□□□□ 0.66
CIRBP-217ENST00000588230 PHPT1Q9NRX4 125 aaPredicted RBP19.17■□□□□ 0.66
CIRBP-217ENST00000588230 NLGN3Q9NZ94 848 aa19.17■□□□□ 0.66
CIRBP-217ENST00000588230 FAM153AQ9UHL3 310 aa19.17■□□□□ 0.66
CIRBP-217ENST00000588230 CD84Q9UIB8 345 aa19.17■□□□□ 0.66
CIRBP-217ENST00000588230 ZMIZ1Q9ULJ6 1067 aa19.17■□□□□ 0.66
CIRBP-217ENST00000588230 PNMA8BQ9ULN7 279 aaPredicted RBP19.17■□□□□ 0.66
CIRBP-217ENST00000588230 PCDHGA1Q9Y5H4 931 aa19.17■□□□□ 0.66
CIRBP-217ENST00000588230 APC2O95996 2303 aa19.16■□□□□ 0.66
CIRBP-217ENST00000588230 F5H423 210 aaPredicted RBP19.16■□□□□ 0.66
CIRBP-217ENST00000588230 NDST3O95803 873 aa19.16■□□□□ 0.66
CIRBP-217ENST00000588230 C1SP09871 688 aa19.16■□□□□ 0.66
CIRBP-217ENST00000588230 CTSEP14091 401 aa19.16■□□□□ 0.66
CIRBP-217ENST00000588230 CKMT2P17540 419 aa19.16■□□□□ 0.66
CIRBP-217ENST00000588230 GPR1P46091 355 aa19.16■□□□□ 0.66
CIRBP-217ENST00000588230 HK3P52790 923 aa19.16■□□□□ 0.66
CIRBP-217ENST00000588230 DAB2P98082 770 aa19.16■□□□□ 0.66
CIRBP-217ENST00000588230 DPTQ07507 201 aa19.16■□□□□ 0.66
CIRBP-217ENST00000588230 RAET1GQ6H3X3 334 aa19.16■□□□□ 0.66
CIRBP-217ENST00000588230 DHRS13Q6UX07 377 aa19.16■□□□□ 0.66
CIRBP-217ENST00000588230 RFLNAQ6ZTI6 216 aa19.16■□□□□ 0.66
CIRBP-217ENST00000588230 HEATR4Q86WZ0 1026 aa19.16■□□□□ 0.66
CIRBP-217ENST00000588230 OR56A4Q8NGH8 313 aa19.16■□□□□ 0.66
CIRBP-217ENST00000588230 TBATAQ96M53 351 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms