RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 MKRN2Q9H000 416 aaKnown RBP11.3□□□□□ -0.6
VMP1-207ENST00000588131 CENPHQ9H3R5 247 aa11.3□□□□□ -0.6
VMP1-207ENST00000588131 MFSD1Q9H3U5 465 aa11.3□□□□□ -0.6
VMP1-207ENST00000588131 LMAN1LQ9HAT1 526 aa11.3□□□□□ -0.6
VMP1-207ENST00000588131 LTB4R2Q9NPC1 389 aa11.3□□□□□ -0.6
VMP1-207ENST00000588131 DYRK4Q9NR20 520 aa11.3□□□□□ -0.6
VMP1-207ENST00000588131 ZFATQ9P243 1243 aa11.3□□□□□ -0.6
VMP1-207ENST00000588131 PSMC3IPQ9P2W1 217 aaPredicted RBP11.3□□□□□ -0.6
VMP1-207ENST00000588131 SERGEFQ9UGK8 458 aa11.3□□□□□ -0.6
VMP1-207ENST00000588131 TBK1Q9UHD2 729 aa11.3□□□□□ -0.6
VMP1-207ENST00000588131 LGALS13Q9UHV8 139 aa11.3□□□□□ -0.6
VMP1-207ENST00000588131 MUTYHQ9UIF7 546 aa11.3□□□□□ -0.6
VMP1-207ENST00000588131 MMP17Q9ULZ9 603 aa11.3□□□□□ -0.6
VMP1-207ENST00000588131 FNDC3AQ9Y2H6 1198 aaKnown RBP11.3□□□□□ -0.6
VMP1-207ENST00000588131 KANSL1LA0AUZ9 987 aa11.29□□□□□ -0.6
VMP1-207ENST00000588131 GOLGA8CPA6NN73 597 aa11.29□□□□□ -0.6
VMP1-207ENST00000588131 H7C0S8 307 aa11.29□□□□□ -0.6
VMP1-207ENST00000588131 AREL1O15033 823 aa11.29□□□□□ -0.6
VMP1-207ENST00000588131 RNASEH1O60930 286 aaKnown RBP11.29□□□□□ -0.6
VMP1-207ENST00000588131 CDH16O75309 829 aa11.29□□□□□ -0.6
VMP1-207ENST00000588131 ADH1BP00325 375 aa11.29□□□□□ -0.6
VMP1-207ENST00000588131 INHBAP08476 426 aa11.29□□□□□ -0.6
VMP1-207ENST00000588131 BPIP17213 487 aa11.29□□□□□ -0.6
VMP1-207ENST00000588131 C5AR1P21730 350 aa11.29□□□□□ -0.6
VMP1-207ENST00000588131 MC4RP32245 332 aa11.29□□□□□ -0.6
VMP1-207ENST00000588131 P2RY2P41231 377 aa11.29□□□□□ -0.6
VMP1-207ENST00000588131 SLC1A2P43004 574 aa11.29□□□□□ -0.6
VMP1-207ENST00000588131 ABCG1P45844 678 aa11.29□□□□□ -0.6
VMP1-207ENST00000588131 STC1P52823 247 aa11.29□□□□□ -0.6
VMP1-207ENST00000588131 XIAPP98170 497 aa11.29□□□□□ -0.6
VMP1-207ENST00000588131 MPP1Q00013 466 aa11.29□□□□□ -0.6
VMP1-207ENST00000588131 CTBP1Q13363 440 aa11.29□□□□□ -0.6
VMP1-207ENST00000588131 FZD5Q13467 585 aa11.29□□□□□ -0.6
VMP1-207ENST00000588131 NAB1Q13506 487 aa11.29□□□□□ -0.6
VMP1-207ENST00000588131 THOC5Q13769 683 aaKnown RBP11.29□□□□□ -0.6
VMP1-207ENST00000588131 UBXN2BQ14CS0 331 aa11.29□□□□□ -0.6
VMP1-207ENST00000588131 HSF5Q4G112 596 aaPredicted RBP11.29□□□□□ -0.6
VMP1-207ENST00000588131 PIP5KL1Q5T9C9 394 aa11.29□□□□□ -0.6
VMP1-207ENST00000588131 ZNF470Q6ECI4 717 aa11.29□□□□□ -0.6
VMP1-207ENST00000588131 NEPROQ6NW34 567 aa11.29□□□□□ -0.6
VMP1-207ENST00000588131 ERAP2Q6P179 960 aa11.29□□□□□ -0.6
VMP1-207ENST00000588131 FBXL19Q6PCT2 694 aa11.29□□□□□ -0.6
VMP1-207ENST00000588131 AFTPHQ6ULP2 937 aa11.29□□□□□ -0.6
VMP1-207ENST00000588131 PACS1Q6VY07 963 aa11.29□□□□□ -0.6
VMP1-207ENST00000588131 HSD11B1LQ7Z5J1 315 aa11.29□□□□□ -0.6
VMP1-207ENST00000588131 CROCCP2Q86T23 111 aa11.29□□□□□ -0.6
VMP1-207ENST00000588131 LDB1Q86U70 411 aaPredicted RBP11.29□□□□□ -0.6
VMP1-207ENST00000588131 SLC26A11Q86WA9 606 aa11.29□□□□□ -0.6
VMP1-207ENST00000588131 TMPRSS6Q8IU80 811 aa11.29□□□□□ -0.6
VMP1-207ENST00000588131 UBALD2Q8IYN6 164 aa11.29□□□□□ -0.6
VMP1-207ENST00000588131 RIBC1Q8N443 379 aaPredicted RBP11.29□□□□□ -0.6
VMP1-207ENST00000588131 HDDC3Q8N4P3 179 aa11.29□□□□□ -0.6
VMP1-207ENST00000588131 PBXIP1Q96AQ6 731 aa11.29□□□□□ -0.6
VMP1-207ENST00000588131 NECAB3Q96P71 396 aaPredicted RBP11.29□□□□□ -0.6
VMP1-207ENST00000588131 FAM167BQ9BTA0 163 aa11.29□□□□□ -0.6
VMP1-207ENST00000588131 WRAP53Q9BUR4 548 aaKnown RBP11.29□□□□□ -0.6
VMP1-207ENST00000588131 HDAC8Q9BY41 377 aa11.29□□□□□ -0.6
VMP1-207ENST00000588131 PPCSQ9HAB8 311 aa11.29□□□□□ -0.6
VMP1-207ENST00000588131 FAM53CQ9NYF3 392 aa11.29□□□□□ -0.6
VMP1-207ENST00000588131 BCCIPQ9P287 314 aaKnown RBP eCLIP11.29□□□□□ -0.6
VMP1-207ENST00000588131 PKP3Q9Y446 797 aa11.29□□□□□ -0.6
VMP1-207ENST00000588131 A0A1W2PP55 124 aa11.28□□□□□ -0.6
VMP1-207ENST00000588131 GOLGA6L10A6NI86 522 aa11.28□□□□□ -0.6
VMP1-207ENST00000588131 GAPDHSO14556 408 aaPredicted RBP11.28□□□□□ -0.6
VMP1-207ENST00000588131 RGS16O15492 202 aaPredicted RBP11.28□□□□□ -0.6
VMP1-207ENST00000588131 GPR39O43194 453 aa11.28□□□□□ -0.6
VMP1-207ENST00000588131 ZNF30P17039 623 aa11.28□□□□□ -0.6
VMP1-207ENST00000588131 GM2AP17900 193 aa11.28□□□□□ -0.6
VMP1-207ENST00000588131 NFKBIAP25963 317 aa11.28□□□□□ -0.6
VMP1-207ENST00000588131 GABRB3P28472 473 aa11.28□□□□□ -0.6
VMP1-207ENST00000588131 FOXN2P32314 431 aa11.28□□□□□ -0.6
VMP1-207ENST00000588131 CA5AP35218 305 aa11.28□□□□□ -0.6
VMP1-207ENST00000588131 GP5P40197 560 aa11.28□□□□□ -0.6
VMP1-207ENST00000588131 HADHAP40939 763 aa11.28□□□□□ -0.6
VMP1-207ENST00000588131 CDKN1CP49918 316 aaPredicted RBP11.28□□□□□ -0.6
VMP1-207ENST00000588131 TAS2R38P59533 333 aa11.28□□□□□ -0.6
VMP1-207ENST00000588131 BMPR2Q13873 1038 aa11.28□□□□□ -0.6
VMP1-207ENST00000588131 ARHGEF7Q14155 803 aa11.28□□□□□ -0.6
VMP1-207ENST00000588131 LRRC32Q14392 662 aa11.28□□□□□ -0.6
VMP1-207ENST00000588131 GAS6Q14393 721 aa11.28□□□□□ -0.6
VMP1-207ENST00000588131 RASA2Q15283 850 aa11.28□□□□□ -0.6
VMP1-207ENST00000588131 CRY1Q16526 586 aa11.28□□□□□ -0.6
VMP1-207ENST00000588131 TMEM52BQ4KMG9 183 aa11.28□□□□□ -0.6
VMP1-207ENST00000588131 TNFAIP8L3Q5GJ75 292 aa11.28□□□□□ -0.6
VMP1-207ENST00000588131 AGBL2Q5U5Z8 902 aa11.28□□□□□ -0.6
VMP1-207ENST00000588131 AGBL4Q5VU57 503 aa11.28□□□□□ -0.6
VMP1-207ENST00000588131 KCTD16Q68DU8 428 aa11.28□□□□□ -0.6
VMP1-207ENST00000588131 PSAPL1Q6NUJ1 521 aa11.28□□□□□ -0.6
VMP1-207ENST00000588131 FAM151BQ6UXP7 276 aa11.28□□□□□ -0.6
VMP1-207ENST00000588131 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.28□□□□□ -0.6
VMP1-207ENST00000588131 LIPIQ6XZB0 460 aa11.28□□□□□ -0.6
VMP1-207ENST00000588131 STRA8Q7Z7C7 330 aa11.28□□□□□ -0.6
VMP1-207ENST00000588131 GJD3Q8N144 294 aa11.28□□□□□ -0.6
VMP1-207ENST00000588131 CBARPQ8N350 705 aaPredicted RBP11.28□□□□□ -0.6
VMP1-207ENST00000588131 OTUD6BQ8N6M0 293 aa11.28□□□□□ -0.6
VMP1-207ENST00000588131 GOLGA6L1Q8N7Z2 621 aa11.28□□□□□ -0.6
VMP1-207ENST00000588131 C2CD4AQ8NCU7 369 aaPredicted RBP11.28□□□□□ -0.6
VMP1-207ENST00000588131 GPR26Q8NDV2 337 aa11.28□□□□□ -0.6
VMP1-207ENST00000588131 FLCNQ8NFG4 579 aa11.28□□□□□ -0.6
VMP1-207ENST00000588131 OR4L1Q8NH43 312 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms