RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 BRSK1Q8TDC3 778 aa10.19□□□□□ -0.78
APOC1-201ENST00000586638 CKAP2Q8WWK9 683 aa10.19□□□□□ -0.78
APOC1-201ENST00000586638 PTPRN2Q92932 1015 aa10.19□□□□□ -0.78
APOC1-201ENST00000586638 ALKBH8Q96BT7 664 aaKnown RBP10.19□□□□□ -0.78
APOC1-201ENST00000586638 FAM111AQ96PZ2 611 aa10.19□□□□□ -0.78
APOC1-201ENST00000586638 SRPK1Q96SB4 655 aaKnown RBP10.19□□□□□ -0.78
APOC1-201ENST00000586638 GPR22Q99680 433 aa10.19□□□□□ -0.78
APOC1-201ENST00000586638 MCMBPQ9BTE3 642 aa10.19□□□□□ -0.78
APOC1-201ENST00000586638 ADGRE3Q9BY15 652 aa10.19□□□□□ -0.78
APOC1-201ENST00000586638 SLC13A1Q9BZW2 595 aa10.19□□□□□ -0.78
APOC1-201ENST00000586638 CEP44Q9C0F1 390 aa10.19□□□□□ -0.78
APOC1-201ENST00000586638 EPN3Q9H201 632 aa10.19□□□□□ -0.78
APOC1-201ENST00000586638 VPS11Q9H270 941 aa10.19□□□□□ -0.78
APOC1-201ENST00000586638 RHOJQ9H4E5 214 aa10.19□□□□□ -0.78
APOC1-201ENST00000586638 MTG2Q9H4K7 406 aa10.19□□□□□ -0.78
APOC1-201ENST00000586638 ATP13A3Q9H7F0 1226 aa10.19□□□□□ -0.78
APOC1-201ENST00000586638 SUDS3Q9H7L9 328 aaPredicted RBP10.19□□□□□ -0.78
APOC1-201ENST00000586638 ZFP14Q9HCL3 533 aa10.19□□□□□ -0.78
APOC1-201ENST00000586638 SPATA6Q9NWH7 488 aaPredicted RBP10.19□□□□□ -0.78
APOC1-201ENST00000586638 DLL3Q9NYJ7 618 aa10.19□□□□□ -0.78
APOC1-201ENST00000586638 FKBPLQ9UIM3 349 aa10.19□□□□□ -0.78
APOC1-201ENST00000586638 FBXO10Q9UK96 956 aa10.19□□□□□ -0.78
APOC1-201ENST00000586638 FBXO5Q9UKT4 447 aa10.19□□□□□ -0.78
APOC1-201ENST00000586638 PLXNB3Q9ULL4 1909 aa10.19□□□□□ -0.78
APOC1-201ENST00000586638 CXorf51AA0A1B0GTR3 108 aa10.18□□□□□ -0.78
APOC1-201ENST00000586638 FAM95CA0A1B0GW59 222 aa10.18□□□□□ -0.78
APOC1-201ENST00000586638 A6NNZ2 444 aa10.18□□□□□ -0.78
APOC1-201ENST00000586638 ANKRD66B4E2M5 251 aa10.18□□□□□ -0.78
APOC1-201ENST00000586638 SLC7A4O43246 635 aa10.18□□□□□ -0.78
APOC1-201ENST00000586638 HTRA2O43464 458 aaPredicted RBP10.18□□□□□ -0.78
APOC1-201ENST00000586638 TIMM44O43615 452 aa10.18□□□□□ -0.78
APOC1-201ENST00000586638 ASMTLO95671 621 aa10.18□□□□□ -0.78
APOC1-201ENST00000586638 CRTAMO95727 393 aa10.18□□□□□ -0.78
APOC1-201ENST00000586638 UGT2B4P06133 528 aa10.18□□□□□ -0.78
APOC1-201ENST00000586638 SDHBP21912 280 aa10.18□□□□□ -0.78
APOC1-201ENST00000586638 DRD4P21917 467 aa10.18□□□□□ -0.78
APOC1-201ENST00000586638 SERPINA4P29622 427 aa10.18□□□□□ -0.78
APOC1-201ENST00000586638 PGGT1BP53609 377 aa10.18□□□□□ -0.78
APOC1-201ENST00000586638 SLC18A1P54219 525 aa10.18□□□□□ -0.78
APOC1-201ENST00000586638 IRF9Q00978 393 aa10.18□□□□□ -0.78
APOC1-201ENST00000586638 PRKCQQ04759 706 aa10.18□□□□□ -0.78
APOC1-201ENST00000586638 CSTF1Q05048 431 aaKnown RBP10.18□□□□□ -0.78
APOC1-201ENST00000586638 LAMB3Q13751 1172 aa10.18□□□□□ -0.78
APOC1-201ENST00000586638 PDE1CQ14123 709 aaPredicted RBP10.18□□□□□ -0.78
APOC1-201ENST00000586638 SEMA3AQ14563 771 aa10.18□□□□□ -0.78
APOC1-201ENST00000586638 PDGFRLQ15198 375 aa10.18□□□□□ -0.78
APOC1-201ENST00000586638 SEPT7Q16181 437 aaKnown RBP10.18□□□□□ -0.78
APOC1-201ENST00000586638 UGP2Q16851 508 aa10.18□□□□□ -0.78
APOC1-201ENST00000586638 MYLK3Q32MK0 819 aa10.18□□□□□ -0.78
APOC1-201ENST00000586638 TUBB8Q3ZCM7 444 aa10.18□□□□□ -0.78
APOC1-201ENST00000586638 CARD16Q5EG05 197 aa10.18□□□□□ -0.78
APOC1-201ENST00000586638 ZNF789Q5FWF6 425 aa10.18□□□□□ -0.78
APOC1-201ENST00000586638 PPM1JQ5JR12 505 aa10.18□□□□□ -0.78
APOC1-201ENST00000586638 RBM20Q5T481 1227 aaKnown RBP10.18□□□□□ -0.78
APOC1-201ENST00000586638 FSTL4Q6MZW2 842 aa10.18□□□□□ -0.78
APOC1-201ENST00000586638 CNSTQ6PJW8 725 aa10.18□□□□□ -0.78
APOC1-201ENST00000586638 AFTPHQ6ULP2 937 aa10.18□□□□□ -0.78
APOC1-201ENST00000586638 MTSS1LQ765P7 747 aa10.18□□□□□ -0.78
APOC1-201ENST00000586638 LYSMD3Q7Z3D4 306 aa10.18□□□□□ -0.78
APOC1-201ENST00000586638 SPNS2Q8IVW8 549 aa10.18□□□□□ -0.78
APOC1-201ENST00000586638 MFSD6LQ8IWD5 586 aa10.18□□□□□ -0.78
APOC1-201ENST00000586638 SFTPA1Q8IWL2 248 aa10.18□□□□□ -0.78
APOC1-201ENST00000586638 YAF2Q8IY57 180 aa10.18□□□□□ -0.78
APOC1-201ENST00000586638 CPA6Q8N4T0 437 aa10.18□□□□□ -0.78
APOC1-201ENST00000586638 ZNF366Q8N895 744 aa10.18□□□□□ -0.78
APOC1-201ENST00000586638 GPATCH11Q8N954 259 aa10.18□□□□□ -0.78
APOC1-201ENST00000586638 OR4K2Q8NGD2 314 aa10.18□□□□□ -0.78
APOC1-201ENST00000586638 GRIN3AQ8TCU5 1115 aa10.18□□□□□ -0.78
APOC1-201ENST00000586638 CALML6Q8TD86 181 aa10.18□□□□□ -0.78
APOC1-201ENST00000586638 STYXQ8WUJ0 223 aa10.18□□□□□ -0.78
APOC1-201ENST00000586638 PIH1D2Q8WWB5 315 aa10.18□□□□□ -0.78
APOC1-201ENST00000586638 FGF14Q92915 247 aa10.18□□□□□ -0.78
APOC1-201ENST00000586638 ISL2Q96A47 359 aa10.18□□□□□ -0.78
APOC1-201ENST00000586638 VOPP1Q96AW1 172 aa10.18□□□□□ -0.78
APOC1-201ENST00000586638 ISG20Q96AZ6 181 aaKnown RBP10.18□□□□□ -0.78
APOC1-201ENST00000586638 ELMO2Q96JJ3 720 aa10.18□□□□□ -0.78
APOC1-201ENST00000586638 FAM83CQ9BQN1 747 aa10.18□□□□□ -0.78
APOC1-201ENST00000586638 OSBPL6Q9BZF3 934 aa10.18□□□□□ -0.78
APOC1-201ENST00000586638 IQCGQ9H095 443 aaKnown RBP10.18□□□□□ -0.78
APOC1-201ENST00000586638 CCDC134Q9H6E4 229 aa10.18□□□□□ -0.78
APOC1-201ENST00000586638 ECT2Q9H8V3 914 aa10.18□□□□□ -0.78
APOC1-201ENST00000586638 BPIFA1Q9NP55 256 aa10.18□□□□□ -0.78
APOC1-201ENST00000586638 CATSPERZQ9NTU4 200 aa10.18□□□□□ -0.78
APOC1-201ENST00000586638 NLE1Q9NVX2 485 aaPredicted RBP10.18□□□□□ -0.78
APOC1-201ENST00000586638 THG1LQ9NWX6 298 aaKnown RBP10.18□□□□□ -0.78
APOC1-201ENST00000586638 NCDNQ9UBB6 729 aa10.18□□□□□ -0.78
APOC1-201ENST00000586638 FBXO4Q9UKT5 387 aa10.18□□□□□ -0.78
APOC1-201ENST00000586638 SLC39A10Q9ULF5 831 aa10.18□□□□□ -0.78
APOC1-201ENST00000586638 RIMKLBQ9ULI2 386 aa10.18□□□□□ -0.78
APOC1-201ENST00000586638 FNDC3AQ9Y2H6 1198 aaKnown RBP10.18□□□□□ -0.78
APOC1-201ENST00000586638 WDR91A4D1P6 747 aa10.17□□□□□ -0.78
APOC1-201ENST00000586638 GMNCA6NCL1 334 aa10.17□□□□□ -0.78
APOC1-201ENST00000586638 ERICH4A6NGS2 130 aa10.17□□□□□ -0.78
APOC1-201ENST00000586638 CAPN8A6NHC0 703 aa10.17□□□□□ -0.78
APOC1-201ENST00000586638 C2orf81A6NN90 581 aa10.17□□□□□ -0.78
APOC1-201ENST00000586638 SRRM3A6NNA2 597 aaPredicted RBP10.17□□□□□ -0.78
APOC1-201ENST00000586638 TCP11X1B4DZS4 312 aa10.17□□□□□ -0.78
APOC1-201ENST00000586638 PRRT4C9JH25 899 aa10.17□□□□□ -0.78
APOC1-201ENST00000586638 TM9SF1O15321 606 aa10.17□□□□□ -0.78
APOC1-201ENST00000586638 PHGDHO43175 533 aaKnown RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms