RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 NUS1Q96E22 293 aa11.87□□□□□ -0.51
BRCA1-225ENST00000586385 DTD2Q96FN9 168 aa11.87□□□□□ -0.51
BRCA1-225ENST00000586385 SCARF2Q96GP6 870 aaPredicted RBP11.87□□□□□ -0.51
BRCA1-225ENST00000586385 SMIM14Q96QK8 99 aa11.87□□□□□ -0.51
BRCA1-225ENST00000586385 PSKH2Q96QS6 385 aa11.87□□□□□ -0.51
BRCA1-225ENST00000586385 SNRNP25Q9BV90 132 aaKnown RBP11.87□□□□□ -0.51
BRCA1-225ENST00000586385 CINPQ9BW66 212 aaPredicted RBP11.87□□□□□ -0.51
BRCA1-225ENST00000586385 GSDMCQ9BYG8 508 aa11.87□□□□□ -0.51
BRCA1-225ENST00000586385 TRIM7Q9C029 511 aa11.87□□□□□ -0.51
BRCA1-225ENST00000586385 DHX35Q9H5Z1 703 aaKnown RBP11.87□□□□□ -0.51
BRCA1-225ENST00000586385 PDP2Q9P2J9 529 aa11.87□□□□□ -0.51
BRCA1-225ENST00000586385 SLC17A4Q9Y2C5 497 aa11.87□□□□□ -0.51
BRCA1-225ENST00000586385 PCDHGC4Q9Y5F7 938 aa11.87□□□□□ -0.51
BRCA1-225ENST00000586385 PCYT1BQ9Y5K3 369 aaPredicted RBP11.87□□□□□ -0.51
BRCA1-225ENST00000586385 NPIPB15A6NHN6 443 aaPredicted RBP11.86□□□□□ -0.51
BRCA1-225ENST00000586385 DFFAO00273 331 aa11.86□□□□□ -0.51
BRCA1-225ENST00000586385 PDE2AO00408 941 aaPredicted RBP11.86□□□□□ -0.51
BRCA1-225ENST00000586385 NKX2-8O15522 239 aa11.86□□□□□ -0.51
BRCA1-225ENST00000586385 EML2O95834 649 aa11.86□□□□□ -0.51
BRCA1-225ENST00000586385 IVLP07476 585 aa11.86□□□□□ -0.51
BRCA1-225ENST00000586385 VIPR1P32241 457 aa11.86□□□□□ -0.51
BRCA1-225ENST00000586385 ADCY8P40145 1251 aa11.86□□□□□ -0.51
BRCA1-225ENST00000586385 AP1S1P61966 158 aa11.86□□□□□ -0.51
BRCA1-225ENST00000586385 FOXK1P85037 733 aa11.86□□□□□ -0.51
BRCA1-225ENST00000586385 IL10RBQ08334 325 aa11.86□□□□□ -0.51
BRCA1-225ENST00000586385 ILF3Q12906 894 aaKnown RBP eCLIP11.86□□□□□ -0.51
BRCA1-225ENST00000586385 TRAF2Q12933 501 aa11.86□□□□□ -0.51
BRCA1-225ENST00000586385 MAMLD1Q13495 774 aa11.86□□□□□ -0.51
BRCA1-225ENST00000586385 TRA2AQ13595 282 aaKnown RBP eCLIP11.86□□□□□ -0.51
BRCA1-225ENST00000586385 DPYSQ14117 519 aa11.86□□□□□ -0.51
BRCA1-225ENST00000586385 SYCP1Q15431 976 aa11.86□□□□□ -0.51
BRCA1-225ENST00000586385 ANKS6Q68DC2 871 aa11.86□□□□□ -0.51
BRCA1-225ENST00000586385 Q6ZVL8 140 aa11.86□□□□□ -0.51
BRCA1-225ENST00000586385 ZNF761Q86XN6 746 aaPredicted RBP11.86□□□□□ -0.51
BRCA1-225ENST00000586385 ENOX1Q8TC92 643 aaKnown RBP11.86□□□□□ -0.51
BRCA1-225ENST00000586385 AGPAT1Q99943 283 aa11.86□□□□□ -0.51
BRCA1-225ENST00000586385 DDA1Q9BW61 102 aa11.86□□□□□ -0.51
BRCA1-225ENST00000586385 SP110Q9HB58 689 aa11.86□□□□□ -0.51
BRCA1-225ENST00000586385 NOD2Q9HC29 1040 aa11.86□□□□□ -0.51
BRCA1-225ENST00000586385 PHPT1Q9NRX4 125 aaPredicted RBP11.86□□□□□ -0.51
BRCA1-225ENST00000586385 PILRAQ9UKJ1 303 aa11.86□□□□□ -0.51
BRCA1-225ENST00000586385 ZFC3H1O60293 1989 aaKnown RBP11.86□□□□□ -0.51
BRCA1-225ENST00000586385 B4E171 279 aa11.85□□□□□ -0.51
BRCA1-225ENST00000586385 ATMINO43313 823 aaPredicted RBP11.85□□□□□ -0.51
BRCA1-225ENST00000586385 RAD1O60671 282 aa11.85□□□□□ -0.51
BRCA1-225ENST00000586385 TEAD1P28347 426 aa11.85□□□□□ -0.51
BRCA1-225ENST00000586385 CASRP41180 1078 aa11.85□□□□□ -0.51
BRCA1-225ENST00000586385 TSPAN7P41732 249 aa11.85□□□□□ -0.51
BRCA1-225ENST00000586385 ATP1A2P50993 1020 aa11.85□□□□□ -0.51
BRCA1-225ENST00000586385 POLR2LP62875 67 aaKnown RBP11.85□□□□□ -0.51
BRCA1-225ENST00000586385 UBAP2LQ14157 1087 aaKnown RBP11.85□□□□□ -0.51
BRCA1-225ENST00000586385 IHHQ14623 411 aa11.85□□□□□ -0.51
BRCA1-225ENST00000586385 RFTN1Q14699 578 aaPredicted RBP11.85□□□□□ -0.51
BRCA1-225ENST00000586385 LBRQ14739 615 aaKnown RBP11.85□□□□□ -0.51
BRCA1-225ENST00000586385 DENND2CQ68D51 928 aa11.85□□□□□ -0.51
BRCA1-225ENST00000586385 ACAD10Q6JQN1 1059 aa11.85□□□□□ -0.51
BRCA1-225ENST00000586385 TIPARPQ7Z3E1 657 aaKnown RBP11.85□□□□□ -0.51
BRCA1-225ENST00000586385 TECPR1Q7Z6L1 1165 aa11.85□□□□□ -0.51
BRCA1-225ENST00000586385 TRIM74Q86UV6 250 aa11.85□□□□□ -0.51
BRCA1-225ENST00000586385 CACNA2D3Q8IZS8 1091 aa11.85□□□□□ -0.51
BRCA1-225ENST00000586385 IL22RA1Q8N6P7 574 aa11.85□□□□□ -0.51
BRCA1-225ENST00000586385 AGBL5Q8NDL9 886 aa11.85□□□□□ -0.51
BRCA1-225ENST00000586385 FNIP1Q8TF40 1166 aa11.85□□□□□ -0.51
BRCA1-225ENST00000586385 MCCC1Q96RQ3 725 aaPredicted RBP11.85□□□□□ -0.51
BRCA1-225ENST00000586385 ETNK2Q9NVF9 386 aa11.85□□□□□ -0.51
BRCA1-225ENST00000586385 SLC39A1Q9NY26 324 aa11.85□□□□□ -0.51
BRCA1-225ENST00000586385 CWC15Q9P013 229 aaKnown RBP11.85□□□□□ -0.51
BRCA1-225ENST00000586385 AKAP7Q9P0M2 348 aaPredicted RBP11.85□□□□□ -0.51
BRCA1-225ENST00000586385 PCSK1NQ9UHG2 260 aa11.85□□□□□ -0.51
BRCA1-225ENST00000586385 TUBD1Q9UJT1 453 aa11.85□□□□□ -0.51
BRCA1-225ENST00000586385 TMEM98Q9Y2Y6 226 aa11.85□□□□□ -0.51
BRCA1-225ENST00000586385 LOC101059948A0A1B0GTJ6 334 aa11.84□□□□□ -0.51
BRCA1-225ENST00000586385 EFCAB7A8K855 629 aa11.84□□□□□ -0.51
BRCA1-225ENST00000586385 SOCS5O75159 536 aa11.84□□□□□ -0.51
BRCA1-225ENST00000586385 CPP00450 1065 aa11.84□□□□□ -0.51
BRCA1-225ENST00000586385 OAS2P29728 719 aaKnown RBP11.84□□□□□ -0.51
BRCA1-225ENST00000586385 MIPP30301 263 aa11.84□□□□□ -0.51
BRCA1-225ENST00000586385 ACTR1BP42025 376 aa11.84□□□□□ -0.51
BRCA1-225ENST00000586385 COPB1P53618 953 aaKnown RBP11.84□□□□□ -0.51
BRCA1-225ENST00000586385 ACTR1AP61163 376 aa11.84□□□□□ -0.51
BRCA1-225ENST00000586385 PYCR3Q53H96 274 aa11.84□□□□□ -0.51
BRCA1-225ENST00000586385 ERMARDQ5T6L9 678 aa11.84□□□□□ -0.51
BRCA1-225ENST00000586385 TMCO4Q5TGY1 634 aa11.84□□□□□ -0.51
BRCA1-225ENST00000586385 PLEKHA7Q6IQ23 1121 aa11.84□□□□□ -0.51
BRCA1-225ENST00000586385 DCUN1D2Q6PH85 259 aa11.84□□□□□ -0.51
BRCA1-225ENST00000586385 DOK6Q6PKX4 331 aa11.84□□□□□ -0.51
BRCA1-225ENST00000586385 APTXQ7Z2E3 356 aaKnown RBP11.84□□□□□ -0.51
BRCA1-225ENST00000586385 ARHGAP22Q7Z5H3 698 aa11.84□□□□□ -0.51
BRCA1-225ENST00000586385 UNC5BQ8IZJ1 945 aa11.84□□□□□ -0.51
BRCA1-225ENST00000586385 SLC37A2Q8TED4 501 aa11.84□□□□□ -0.51
BRCA1-225ENST00000586385 RTP4Q96DX8 246 aa11.84□□□□□ -0.51
BRCA1-225ENST00000586385 SLC45A3Q96JT2 553 aa11.84□□□□□ -0.51
BRCA1-225ENST00000586385 OR2M4Q96R27 311 aa11.84□□□□□ -0.51
BRCA1-225ENST00000586385 NUDCD1Q96RS6 583 aa11.84□□□□□ -0.51
BRCA1-225ENST00000586385 AGAP2Q99490 1192 aa11.84□□□□□ -0.51
BRCA1-225ENST00000586385 MGME1Q9BQP7 344 aa11.84□□□□□ -0.51
BRCA1-225ENST00000586385 ZNF71Q9NQZ8 489 aaPredicted RBP11.84□□□□□ -0.51
BRCA1-225ENST00000586385 SEPT11Q9NVA2 429 aaKnown RBP11.84□□□□□ -0.51
BRCA1-225ENST00000586385 FANCLQ9NW38 375 aa11.84□□□□□ -0.51
BRCA1-225ENST00000586385 SEPT3Q9UH03 358 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms