RNA–Protein interactions for RNA: ENST00000585961.1

CLPTM1-204, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-204ENST00000585961 SMTNL2Q2TAL5 461 aa20.09■□□□□ 0.81
CLPTM1-204ENST00000585961 CBARPQ8N350 705 aaPredicted RBP20.09■□□□□ 0.81
CLPTM1-204ENST00000585961 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.09■□□□□ 0.81
CLPTM1-204ENST00000585961 AOPEPQ8N6M6 819 aa20.09■□□□□ 0.81
CLPTM1-204ENST00000585961 ZSCAN1Q8NBB4 408 aa20.09■□□□□ 0.81
CLPTM1-204ENST00000585961 TEX101Q9BY14 249 aa20.09■□□□□ 0.81
CLPTM1-204ENST00000585961 GSDMCQ9BYG8 508 aa20.09■□□□□ 0.81
CLPTM1-204ENST00000585961 ZWILCHQ9H900 591 aa20.09■□□□□ 0.81
CLPTM1-204ENST00000585961 AKAP7Q9P0M2 348 aaPredicted RBP20.09■□□□□ 0.81
CLPTM1-204ENST00000585961 CD84Q9UIB8 345 aa20.09■□□□□ 0.81
CLPTM1-204ENST00000585961 PHTF1Q9UMS5 762 aa20.09■□□□□ 0.81
CLPTM1-204ENST00000585961 PCDHGA4Q9Y5G9 962 aa20.09■□□□□ 0.81
CLPTM1-204ENST00000585961 ANKRD36A6QL64 1941 aa20.09■□□□□ 0.81
CLPTM1-204ENST00000585961 BOD1L1Q8NFC6 3051 aa20.08■□□□□ 0.81
CLPTM1-204ENST00000585961 IGHV5-10-1A0A0J9YXX1 117 aa20.08■□□□□ 0.81
CLPTM1-204ENST00000585961 LRRC53A6NM62 1247 aa20.08■□□□□ 0.81
CLPTM1-204ENST00000585961 EIF3CLB5ME19 914 aaKnown RBP20.08■□□□□ 0.81
CLPTM1-204ENST00000585961 PPM1DO15297 605 aa20.08■□□□□ 0.81
CLPTM1-204ENST00000585961 LRCH4O75427 683 aa20.08■□□□□ 0.81
CLPTM1-204ENST00000585961 PEX11BO96011 259 aa20.08■□□□□ 0.81
CLPTM1-204ENST00000585961 CPP00450 1065 aa20.08■□□□□ 0.81
CLPTM1-204ENST00000585961 FGF3P11487 239 aaPredicted RBP20.08■□□□□ 0.81
CLPTM1-204ENST00000585961 ADCY8P40145 1251 aa20.08■□□□□ 0.81
CLPTM1-204ENST00000585961 CDK3Q00526 305 aa20.08■□□□□ 0.81
CLPTM1-204ENST00000585961 TRAF2Q12933 501 aa20.08■□□□□ 0.81
CLPTM1-204ENST00000585961 STX1AQ16623 288 aa20.08■□□□□ 0.81
CLPTM1-204ENST00000585961 TMEM164Q5U3C3 297 aa20.08■□□□□ 0.81
CLPTM1-204ENST00000585961 RAET1GQ6H3X3 334 aa20.08■□□□□ 0.81
CLPTM1-204ENST00000585961 DTX1Q86Y01 620 aa20.08■□□□□ 0.81
CLPTM1-204ENST00000585961 LZTR1Q8N653 840 aa20.08■□□□□ 0.81
CLPTM1-204ENST00000585961 PMEPA1Q969W9 287 aa20.08■□□□□ 0.81
CLPTM1-204ENST00000585961 NUDCD1Q96RS6 583 aa20.08■□□□□ 0.81
CLPTM1-204ENST00000585961 EIF3CQ99613 913 aaKnown RBP20.08■□□□□ 0.81
CLPTM1-204ENST00000585961 FRMD8Q9BZ67 464 aaPredicted RBP20.08■□□□□ 0.81
CLPTM1-204ENST00000585961 A0A1W2PQC6 194 aa20.07■□□□□ 0.8
CLPTM1-204ENST00000585961 NPIPB15A6NHN6 443 aaPredicted RBP20.07■□□□□ 0.8
CLPTM1-204ENST00000585961 H3BRJ5 948 aa20.07■□□□□ 0.8
CLPTM1-204ENST00000585961 DDX3XO00571 662 aaKnown RBP eCLIP20.07■□□□□ 0.8
CLPTM1-204ENST00000585961 MAFKO60675 156 aa20.07■□□□□ 0.8
CLPTM1-204ENST00000585961 ITGB6P18564 788 aa20.07■□□□□ 0.8
CLPTM1-204ENST00000585961 LHCGRP22888 699 aa20.07■□□□□ 0.8
CLPTM1-204ENST00000585961 PPM1FP49593 454 aaPredicted RBP20.07■□□□□ 0.8
CLPTM1-204ENST00000585961 MARK2Q7KZI7 788 aaKnown RBP20.07■□□□□ 0.8
CLPTM1-204ENST00000585961 C17orf82Q86X59 251 aaPredicted RBP20.07■□□□□ 0.8
CLPTM1-204ENST00000585961 HTR3CQ8WXA8 447 aa20.07■□□□□ 0.8
CLPTM1-204ENST00000585961 ZNF653Q96CK0 615 aa20.07■□□□□ 0.8
CLPTM1-204ENST00000585961 DTD2Q96FN9 168 aa20.07■□□□□ 0.8
CLPTM1-204ENST00000585961 CCDC74BQ96LY2 380 aa20.07■□□□□ 0.8
CLPTM1-204ENST00000585961 ZNF599Q96NL3 588 aa20.07■□□□□ 0.8
CLPTM1-204ENST00000585961 IL17BQ9UHF5 180 aa20.07■□□□□ 0.8
CLPTM1-204ENST00000585961 LRP4O75096 1905 aa20.06■□□□□ 0.8
CLPTM1-204ENST00000585961 ARHGEF17Q96PE2 2063 aaPredicted RBP20.06■□□□□ 0.8
CLPTM1-204ENST00000585961 CYP2A6P11509 494 aaPredicted RBP20.06■□□□□ 0.8
CLPTM1-204ENST00000585961 CR2P20023 1033 aa20.06■□□□□ 0.8
CLPTM1-204ENST00000585961 GPR1P46091 355 aa20.06■□□□□ 0.8
CLPTM1-204ENST00000585961 ITKQ08881 620 aa20.06■□□□□ 0.8
CLPTM1-204ENST00000585961 CLCA4Q14CN2 919 aa20.06■□□□□ 0.8
CLPTM1-204ENST00000585961 E4F1Q66K89 784 aaPredicted RBP20.06■□□□□ 0.8
CLPTM1-204ENST00000585961 TXNRD3NBQ6F5E7 133 aa20.06■□□□□ 0.8
CLPTM1-204ENST00000585961 TMCO3Q6UWJ1 677 aa20.06■□□□□ 0.8
CLPTM1-204ENST00000585961 POLNQ7Z5Q5 900 aa20.06■□□□□ 0.8
CLPTM1-204ENST00000585961 TRIM74Q86UV6 250 aa20.06■□□□□ 0.8
CLPTM1-204ENST00000585961 ZNF761Q86XN6 746 aaPredicted RBP20.06■□□□□ 0.8
CLPTM1-204ENST00000585961 PSTKQ8IV42 348 aaKnown RBP20.06■□□□□ 0.8
CLPTM1-204ENST00000585961 NAGSQ8N159 534 aa20.06■□□□□ 0.8
CLPTM1-204ENST00000585961 FNIP1Q8TF40 1166 aa20.06■□□□□ 0.8
CLPTM1-204ENST00000585961 TAAR9Q96RI9 348 aa20.06■□□□□ 0.8
CLPTM1-204ENST00000585961 RTN4Q9NQC3 1192 aaKnown RBP20.06■□□□□ 0.8
CLPTM1-204ENST00000585961 TRNAU1APQ9NX07 287 aaKnown RBP20.06■□□□□ 0.8
CLPTM1-204ENST00000585961 TMEM9Q9P0T7 183 aa20.06■□□□□ 0.8
CLPTM1-204ENST00000585961 SOCS5O75159 536 aa20.05■□□□□ 0.8
CLPTM1-204ENST00000585961 ITGB2P05107 769 aa20.05■□□□□ 0.8
CLPTM1-204ENST00000585961 PDHA1P08559 390 aa20.05■□□□□ 0.8
CLPTM1-204ENST00000585961 ARL4AP40617 200 aa20.05■□□□□ 0.8
CLPTM1-204ENST00000585961 ARSDP51689 593 aa20.05■□□□□ 0.8
CLPTM1-204ENST00000585961 ARMC12Q5T9G4 340 aa20.05■□□□□ 0.8
CLPTM1-204ENST00000585961 MARC1Q5VT66 337 aa20.05■□□□□ 0.8
CLPTM1-204ENST00000585961 PPP1R2P3Q6NXS1 205 aa20.05■□□□□ 0.8
CLPTM1-204ENST00000585961 CLEC17AQ6ZS10 378 aa20.05■□□□□ 0.8
CLPTM1-204ENST00000585961 ZNF438Q7Z4V0 828 aa20.05■□□□□ 0.8
CLPTM1-204ENST00000585961 SCAMP4Q969E2 229 aa20.05■□□□□ 0.8
CLPTM1-204ENST00000585961 SCRN2Q96FV2 425 aa20.05■□□□□ 0.8
CLPTM1-204ENST00000585961 BTBD6Q96KE9 485 aa20.05■□□□□ 0.8
CLPTM1-204ENST00000585961 CSPG4P5Q96PW8 444 aa20.05■□□□□ 0.8
CLPTM1-204ENST00000585961 ABCG8Q9H221 673 aa20.05■□□□□ 0.8
CLPTM1-204ENST00000585961 NT5MQ9NPB1 228 aa20.05■□□□□ 0.8
CLPTM1-204ENST00000585961 STARD5Q9NSY2 213 aa20.05■□□□□ 0.8
CLPTM1-204ENST00000585961 A0A1W2PQ67 120 aa20.04■□□□□ 0.8
CLPTM1-204ENST00000585961 ARHGAP6O43182 974 aa20.04■□□□□ 0.8
CLPTM1-204ENST00000585961 PGLSO95336 258 aa20.04■□□□□ 0.8
CLPTM1-204ENST00000585961 RARAP10276 462 aa20.04■□□□□ 0.8
CLPTM1-204ENST00000585961 GZMAP12544 262 aa20.04■□□□□ 0.8
CLPTM1-204ENST00000585961 ACTR1BP42025 376 aa20.04■□□□□ 0.8
CLPTM1-204ENST00000585961 MMP13P45452 471 aa20.04■□□□□ 0.8
CLPTM1-204ENST00000585961 LIMK2P53671 638 aa20.04■□□□□ 0.8
CLPTM1-204ENST00000585961 ACTR1AP61163 376 aa20.04■□□□□ 0.8
CLPTM1-204ENST00000585961 KLHL30Q0D2K2 578 aa20.04■□□□□ 0.8
CLPTM1-204ENST00000585961 BOLA3Q53S33 107 aa20.04■□□□□ 0.8
CLPTM1-204ENST00000585961 SNAP47Q5SQN1 464 aa20.04■□□□□ 0.8
CLPTM1-204ENST00000585961 XKR5Q6UX68 686 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms