RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 SHBQ15464 509 aa13.8□□□□□ -0.2
PRKCSH-202ENST00000585540 ANKRD20A2Q5SQ80 823 aa13.8□□□□□ -0.2
PRKCSH-202ENST00000585540 ANKRD20A1Q5TYW2 823 aa13.8□□□□□ -0.2
PRKCSH-202ENST00000585540 ANKRD20A3Q5VUR7 823 aa13.8□□□□□ -0.2
PRKCSH-202ENST00000585540 PNCKQ6P2M8 343 aa13.8□□□□□ -0.2
PRKCSH-202ENST00000585540 KDELC1Q6UW63 502 aa13.8□□□□□ -0.2
PRKCSH-202ENST00000585540 DEFB124Q8NES8 71 aa13.8□□□□□ -0.2
PRKCSH-202ENST00000585540 OR2I1PQ8NGU4 316 aa13.8□□□□□ -0.2
PRKCSH-202ENST00000585540 SETD7Q8WTS6 366 aaKnown RBP13.8□□□□□ -0.2
PRKCSH-202ENST00000585540 PBKQ96KB5 322 aa13.8□□□□□ -0.2
PRKCSH-202ENST00000585540 TEX101Q9BY14 249 aa13.8□□□□□ -0.2
PRKCSH-202ENST00000585540 CEP41Q9BYV8 373 aa13.8□□□□□ -0.2
PRKCSH-202ENST00000585540 SLC13A1Q9BZW2 595 aa13.8□□□□□ -0.2
PRKCSH-202ENST00000585540 MBNL1Q9NR56 388 aaKnown RBP13.8□□□□□ -0.2
PRKCSH-202ENST00000585540 NLGN3Q9NZ94 848 aa13.8□□□□□ -0.2
PRKCSH-202ENST00000585540 FTSJ1Q9UET6 329 aa13.8□□□□□ -0.2
PRKCSH-202ENST00000585540 CA5BQ9Y2D0 317 aa13.8□□□□□ -0.2
PRKCSH-202ENST00000585540 KNL1Q8NG31 2342 aa13.8□□□□□ -0.2
PRKCSH-202ENST00000585540 TNFSF14O43557 240 aa13.79□□□□□ -0.2
PRKCSH-202ENST00000585540 GCATO75600 419 aa13.79□□□□□ -0.2
PRKCSH-202ENST00000585540 MT-CYBP00156 380 aaPredicted RBP13.79□□□□□ -0.2
PRKCSH-202ENST00000585540 PRKCGP05129 697 aa13.79□□□□□ -0.2
PRKCSH-202ENST00000585540 ADRB1P08588 477 aa13.79□□□□□ -0.2
PRKCSH-202ENST00000585540 C1SP09871 688 aa13.79□□□□□ -0.2
PRKCSH-202ENST00000585540 ALPIP09923 528 aa13.79□□□□□ -0.2
PRKCSH-202ENST00000585540 JUNDP17535 347 aa13.79□□□□□ -0.2
PRKCSH-202ENST00000585540 CTPS1P17812 591 aa13.79□□□□□ -0.2
PRKCSH-202ENST00000585540 GM2AP17900 193 aa13.79□□□□□ -0.2
PRKCSH-202ENST00000585540 CXCR5P32302 372 aa13.79□□□□□ -0.2
PRKCSH-202ENST00000585540 WNT3AP56704 352 aa13.79□□□□□ -0.2
PRKCSH-202ENST00000585540 PTSQ03393 145 aa13.79□□□□□ -0.2
PRKCSH-202ENST00000585540 ELOCQ15369 112 aa13.79□□□□□ -0.2
PRKCSH-202ENST00000585540 TRIP6Q15654 476 aaKnown RBP13.79□□□□□ -0.2
PRKCSH-202ENST00000585540 PARP6Q2NL67 630 aa13.79□□□□□ -0.2
PRKCSH-202ENST00000585540 RAET1GQ6H3X3 334 aa13.79□□□□□ -0.2
PRKCSH-202ENST00000585540 PSAPL1Q6NUJ1 521 aa13.79□□□□□ -0.2
PRKCSH-202ENST00000585540 LVRNQ6Q4G3 990 aa13.79□□□□□ -0.2
PRKCSH-202ENST00000585540 ADAMTSL4Q6UY14 1074 aa13.79□□□□□ -0.2
PRKCSH-202ENST00000585540 ARHGEF18Q6ZSZ5 1173 aa13.79□□□□□ -0.2
PRKCSH-202ENST00000585540 KANSL1Q7Z3B3 1105 aa13.79□□□□□ -0.2
PRKCSH-202ENST00000585540 PHACTR4Q8IZ21 702 aa13.79□□□□□ -0.2
PRKCSH-202ENST00000585540 FAM181AQ8N9Y4 354 aa13.79□□□□□ -0.2
PRKCSH-202ENST00000585540 OR56A4Q8NGH8 313 aa13.79□□□□□ -0.2
PRKCSH-202ENST00000585540 OR4C6Q8NH72 309 aa13.79□□□□□ -0.2
PRKCSH-202ENST00000585540 AP2M1Q96CW1 435 aa13.79□□□□□ -0.2
PRKCSH-202ENST00000585540 C10orf88Q9H8K7 445 aa13.79□□□□□ -0.2
PRKCSH-202ENST00000585540 DNAJC28Q9NX36 388 aa13.79□□□□□ -0.2
PRKCSH-202ENST00000585540 KLQ9UEF7 1012 aa13.79□□□□□ -0.2
PRKCSH-202ENST00000585540 APOBEC3BQ9UH17 382 aaKnown RBP13.79□□□□□ -0.2
PRKCSH-202ENST00000585540 TTC7AQ9ULT0 858 aaPredicted RBP13.79□□□□□ -0.2
PRKCSH-202ENST00000585540 ZNF711Q9Y462 761 aa13.79□□□□□ -0.2
PRKCSH-202ENST00000585540 PCNX2A6NKB5 2137 aa13.79□□□□□ -0.2
PRKCSH-202ENST00000585540 GPR89AB7ZAQ6 455 aa13.78□□□□□ -0.2
PRKCSH-202ENST00000585540 SCAMP1O15126 338 aa13.78□□□□□ -0.2
PRKCSH-202ENST00000585540 AQP9O43315 295 aa13.78□□□□□ -0.2
PRKCSH-202ENST00000585540 LIASO43766 372 aa13.78□□□□□ -0.2
PRKCSH-202ENST00000585540 GPR89BP0CG08 455 aa13.78□□□□□ -0.2
PRKCSH-202ENST00000585540 DGKAP23743 735 aa13.78□□□□□ -0.2
PRKCSH-202ENST00000585540 HMGCLP35914 325 aa13.78□□□□□ -0.2
PRKCSH-202ENST00000585540 FDFT1P37268 417 aa13.78□□□□□ -0.2
PRKCSH-202ENST00000585540 ETV3P41162 512 aa13.78□□□□□ -0.2
PRKCSH-202ENST00000585540 GPR1P46091 355 aa13.78□□□□□ -0.2
PRKCSH-202ENST00000585540 SPINT3P49223 89 aa13.78□□□□□ -0.2
PRKCSH-202ENST00000585540 DUSP3P51452 185 aaPredicted RBP13.78□□□□□ -0.2
PRKCSH-202ENST00000585540 HK3P52790 923 aa13.78□□□□□ -0.2
PRKCSH-202ENST00000585540 GALNT3Q14435 633 aa13.78□□□□□ -0.2
PRKCSH-202ENST00000585540 IHHQ14623 411 aa13.78□□□□□ -0.2
PRKCSH-202ENST00000585540 OASLQ15646 514 aaKnown RBP13.78□□□□□ -0.2
PRKCSH-202ENST00000585540 SLC1A5Q15758 541 aa13.78□□□□□ -0.2
PRKCSH-202ENST00000585540 PCSK7Q16549 785 aa13.78□□□□□ -0.2
PRKCSH-202ENST00000585540 CCNG2Q16589 344 aa13.78□□□□□ -0.2
PRKCSH-202ENST00000585540 CDKN3Q16667 212 aa13.78□□□□□ -0.2
PRKCSH-202ENST00000585540 HENMT1Q5T8I9 393 aaKnown RBP13.78□□□□□ -0.2
PRKCSH-202ENST00000585540 HSD11B1LQ7Z5J1 315 aa13.78□□□□□ -0.2
PRKCSH-202ENST00000585540 TMC3Q7Z5M5 1100 aa13.78□□□□□ -0.2
PRKCSH-202ENST00000585540 TSPAN33Q86UF1 283 aa13.78□□□□□ -0.2
PRKCSH-202ENST00000585540 SPATA22Q8NHS9 363 aa13.78□□□□□ -0.2
PRKCSH-202ENST00000585540 GLMNQ92990 594 aa13.78□□□□□ -0.2
PRKCSH-202ENST00000585540 MRGPRX2Q96LB1 330 aa13.78□□□□□ -0.2
PRKCSH-202ENST00000585540 PLEKHG4BQ96PX9 1271 aa13.78□□□□□ -0.2
PRKCSH-202ENST00000585540 ZSCAN5AQ9BUG6 496 aa13.78□□□□□ -0.2
PRKCSH-202ENST00000585540 KCND1Q9NSA2 647 aa13.78□□□□□ -0.2
PRKCSH-202ENST00000585540 R3HDM2Q9Y2K5 976 aaKnown RBP13.78□□□□□ -0.2
PRKCSH-202ENST00000585540 CFAP54Q96N23 3096 aa13.78□□□□□ -0.2
PRKCSH-202ENST00000585540 CNOT1A5YKK6 2376 aaKnown RBP13.78□□□□□ -0.2
PRKCSH-202ENST00000585540 FANCGO15287 622 aa13.77□□□□□ -0.21
PRKCSH-202ENST00000585540 PMPCBO75439 489 aa13.77□□□□□ -0.21
PRKCSH-202ENST00000585540 LDOC1O95751 146 aaPredicted RBP13.77□□□□□ -0.21
PRKCSH-202ENST00000585540 TNFP01375 233 aa13.77□□□□□ -0.21
PRKCSH-202ENST00000585540 ATXN1LP0C7T5 689 aaKnown RBP13.77□□□□□ -0.21
PRKCSH-202ENST00000585540 GNG11P61952 73 aa13.77□□□□□ -0.21
PRKCSH-202ENST00000585540 CDK3Q00526 305 aa13.77□□□□□ -0.21
PRKCSH-202ENST00000585540 EIF2B5Q13144 721 aaKnown RBP13.77□□□□□ -0.21
PRKCSH-202ENST00000585540 ZCCHC8Q6NZY4 707 aaKnown RBP13.77□□□□□ -0.21
PRKCSH-202ENST00000585540 ENPP7Q6UWV6 458 aa13.77□□□□□ -0.21
PRKCSH-202ENST00000585540 Q6ZVL8 140 aa13.77□□□□□ -0.21
PRKCSH-202ENST00000585540 LINC00523Q86TU6 105 aa13.77□□□□□ -0.21
PRKCSH-202ENST00000585540 GKN2Q86XP6 184 aa13.77□□□□□ -0.21
PRKCSH-202ENST00000585540 RASGEF1CQ8N431 466 aa13.77□□□□□ -0.21
PRKCSH-202ENST00000585540 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms