RNA–Protein interactions for RNA: ENST00000585420.5

GCDH-203, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,730 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-203ENST00000585420 PPP2CAP67775 309 aa16.73■□□□□ 0.27
GCDH-203ENST00000585420 SF3A2Q15428 464 aaKnown RBP16.73■□□□□ 0.27
GCDH-203ENST00000585420 CSRP2Q16527 193 aa16.73■□□□□ 0.27
GCDH-203ENST00000585420 KYNUQ16719 465 aa16.73■□□□□ 0.27
GCDH-203ENST00000585420 KIAA0895LQ68EN5 471 aa16.73■□□□□ 0.27
GCDH-203ENST00000585420 FBXL19Q6PCT2 694 aa16.73■□□□□ 0.27
GCDH-203ENST00000585420 CAPN12Q6ZSI9 719 aa16.73■□□□□ 0.27
GCDH-203ENST00000585420 TRMT10CQ7L0Y3 403 aaKnown RBP16.73■□□□□ 0.27
GCDH-203ENST00000585420 IGDCC3Q8IVU1 814 aa16.73■□□□□ 0.27
GCDH-203ENST00000585420 PALM2Q8IXS6 379 aa16.73■□□□□ 0.27
GCDH-203ENST00000585420 KIAA2013Q8IYS2 634 aa16.73■□□□□ 0.27
GCDH-203ENST00000585420 BLOC1S5Q8TDH9 187 aa16.73■□□□□ 0.27
GCDH-203ENST00000585420 CFAP36Q96G28 342 aa16.73■□□□□ 0.27
GCDH-203ENST00000585420 EBNA1BP2Q99848 306 aaKnown RBP16.73■□□□□ 0.27
GCDH-203ENST00000585420 ORAI3Q9BRQ5 295 aa16.73■□□□□ 0.27
GCDH-203ENST00000585420 MIR1-1HGQ9H1L0 117 aa16.73■□□□□ 0.27
GCDH-203ENST00000585420 KDM4CQ9H3R0 1056 aa16.73■□□□□ 0.27
GCDH-203ENST00000585420 NINJ2Q9NZG7 142 aa16.73■□□□□ 0.27
GCDH-203ENST00000585420 ZC3H7BQ9UGR2 993 aaKnown RBP16.73■□□□□ 0.27
GCDH-203ENST00000585420 FAM186AA6NE01 2351 aa16.73■□□□□ 0.27
GCDH-203ENST00000585420 ANKRD66B4E2M5 251 aa16.73■□□□□ 0.27
GCDH-203ENST00000585420 ACSL3O95573 720 aa16.73■□□□□ 0.27
GCDH-203ENST00000585420 PRKCGP05129 697 aa16.73■□□□□ 0.27
GCDH-203ENST00000585420 PIRTP0C851 137 aa16.73■□□□□ 0.27
GCDH-203ENST00000585420 GRIA4P48058 902 aa16.73■□□□□ 0.27
GCDH-203ENST00000585420 RPL26P61254 145 aaKnown RBP16.73■□□□□ 0.27
GCDH-203ENST00000585420 CCDC15Q0P6D6 951 aa16.73■□□□□ 0.27
GCDH-203ENST00000585420 CBLBQ13191 982 aa16.73■□□□□ 0.27
GCDH-203ENST00000585420 SEPT6Q14141 434 aa16.73■□□□□ 0.27
GCDH-203ENST00000585420 QPCTQ16769 361 aa16.73■□□□□ 0.27
GCDH-203ENST00000585420 LRRC73Q5JTD7 316 aa16.73■□□□□ 0.27
GCDH-203ENST00000585420 ZSWIM9Q86XI8 627 aa16.73■□□□□ 0.27
GCDH-203ENST00000585420 PPHLN1Q8NEY8 458 aaKnown RBP16.73■□□□□ 0.27
GCDH-203ENST00000585420 C1orf216Q8TAB5 229 aa16.73■□□□□ 0.27
GCDH-203ENST00000585420 ECHDC3Q96DC8 303 aa16.73■□□□□ 0.27
GCDH-203ENST00000585420 TTC25Q96NG3 672 aa16.73■□□□□ 0.27
GCDH-203ENST00000585420 RPL26L1Q9UNX3 145 aaKnown RBP16.73■□□□□ 0.27
GCDH-203ENST00000585420 PTPRZ1P23471 2315 aaPredicted RBP16.72■□□□□ 0.27
GCDH-203ENST00000585420 CTPS1P17812 591 aa16.72■□□□□ 0.27
GCDH-203ENST00000585420 MAT2AP31153 395 aaKnown RBP16.72■□□□□ 0.27
GCDH-203ENST00000585420 HSD17B3P37058 310 aa16.72■□□□□ 0.27
GCDH-203ENST00000585420 ABL2P42684 1182 aa16.72■□□□□ 0.27
GCDH-203ENST00000585420 TRIM61Q5EBN2 209 aa16.72■□□□□ 0.27
GCDH-203ENST00000585420 PCID2Q5JVF3 399 aa16.72■□□□□ 0.27
GCDH-203ENST00000585420 PRR23CQ6ZRP0 262 aa16.72■□□□□ 0.27
GCDH-203ENST00000585420 TTC7BQ86TV6 843 aa16.72■□□□□ 0.27
GCDH-203ENST00000585420 MREGQ8N565 214 aa16.72■□□□□ 0.27
GCDH-203ENST00000585420 PIH1D2Q8WWB5 315 aa16.72■□□□□ 0.27
GCDH-203ENST00000585420 SMIM14Q96QK8 99 aa16.72■□□□□ 0.27
GCDH-203ENST00000585420 TRIM56Q9BRZ2 755 aaKnown RBP16.72■□□□□ 0.27
GCDH-203ENST00000585420 VPS37BQ9H9H4 285 aa16.72■□□□□ 0.27
GCDH-203ENST00000585420 RXFP3Q9NSD7 469 aa16.72■□□□□ 0.27
GCDH-203ENST00000585420 FADS3Q9Y5Q0 445 aa16.72■□□□□ 0.27
GCDH-203ENST00000585420 GVINP1Q7Z2Y8 2422 aa16.71■□□□□ 0.27
GCDH-203ENST00000585420 A0A1W2PQ67 120 aa16.71■□□□□ 0.27
GCDH-203ENST00000585420 RIPK2O43353 540 aa16.71■□□□□ 0.27
GCDH-203ENST00000585420 TTC4O95801 387 aa16.71■□□□□ 0.27
GCDH-203ENST00000585420 PGAM1P18669 254 aa16.71■□□□□ 0.27
GCDH-203ENST00000585420 HOXD12P35452 270 aa16.71■□□□□ 0.27
GCDH-203ENST00000585420 IRX4P78413 519 aa16.71■□□□□ 0.27
GCDH-203ENST00000585420 UBAP2Q5T6F2 1119 aaKnown RBP16.71■□□□□ 0.27
GCDH-203ENST00000585420 BRAT1Q6PJG6 821 aa16.71■□□□□ 0.27
GCDH-203ENST00000585420 CCNJLQ8IV13 435 aa16.71■□□□□ 0.27
GCDH-203ENST00000585420 NDUFAF2Q8N183 169 aa16.71■□□□□ 0.27
GCDH-203ENST00000585420 NAT9Q9BTE0 207 aa16.71■□□□□ 0.27
GCDH-203ENST00000585420 LRRC4CQ9HCJ2 640 aa16.71■□□□□ 0.27
GCDH-203ENST00000585420 PREBQ9HCU5 417 aa16.71■□□□□ 0.27
GCDH-203ENST00000585420 FSCN3Q9NQT6 498 aa16.71■□□□□ 0.27
GCDH-203ENST00000585420 CHRAC1Q9NRG0 131 aa16.71■□□□□ 0.27
GCDH-203ENST00000585420 DKK3Q9UBP4 350 aa16.71■□□□□ 0.27
GCDH-203ENST00000585420 GGT7Q9UJ14 662 aa16.71■□□□□ 0.27
GCDH-203ENST00000585420 ITM2BQ9Y287 266 aa16.71■□□□□ 0.27
GCDH-203ENST00000585420 A0A1W2PPC4 97 aa16.7■□□□□ 0.26
GCDH-203ENST00000585420 MAGEB16A2A368 324 aa16.7■□□□□ 0.26
GCDH-203ENST00000585420 CCDC78A2IDD5 438 aa16.7■□□□□ 0.26
GCDH-203ENST00000585420 HEATR9A2RTY3 570 aa16.7■□□□□ 0.26
GCDH-203ENST00000585420 SPINT1O43278 529 aa16.7■□□□□ 0.26
GCDH-203ENST00000585420 LATO43561 262 aa16.7■□□□□ 0.26
GCDH-203ENST00000585420 PCDH8O95206 1070 aa16.7■□□□□ 0.26
GCDH-203ENST00000585420 ALPIP09923 528 aa16.7■□□□□ 0.26
GCDH-203ENST00000585420 TIMP2P16035 220 aa16.7■□□□□ 0.26
GCDH-203ENST00000585420 ADRA1DP25100 572 aa16.7■□□□□ 0.26
GCDH-203ENST00000585420 CD27P26842 260 aa16.7■□□□□ 0.26
GCDH-203ENST00000585420 DPP6P42658 865 aa16.7■□□□□ 0.26
GCDH-203ENST00000585420 CCR5P51681 352 aa16.7■□□□□ 0.26
GCDH-203ENST00000585420 POLR2LP62875 67 aaKnown RBP16.7■□□□□ 0.26
GCDH-203ENST00000585420 PTPRRQ15256 657 aa16.7■□□□□ 0.26
GCDH-203ENST00000585420 UAP1Q16222 522 aaPredicted RBP16.7■□□□□ 0.26
GCDH-203ENST00000585420 GLT6D1Q7Z4J2 308 aa16.7■□□□□ 0.26
GCDH-203ENST00000585420 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.7■□□□□ 0.26
GCDH-203ENST00000585420 PHTF1Q9UMS5 762 aa16.7■□□□□ 0.26
GCDH-203ENST00000585420 SOX13Q9UN79 622 aa16.7■□□□□ 0.26
GCDH-203ENST00000585420 ZFR2Q9UPR6 939 aaKnown RBP16.7■□□□□ 0.26
GCDH-203ENST00000585420 TCAF1Q9Y4C2 921 aa16.7■□□□□ 0.26
GCDH-203ENST00000585420 SPO11Q9Y5K1 396 aa16.7■□□□□ 0.26
GCDH-203ENST00000585420 RPS6KL1Q9Y6S9 549 aa16.7■□□□□ 0.26
GCDH-203ENST00000585420 RALGAPA1Q6GYQ0 2036 aa16.7■□□□□ 0.26
GCDH-203ENST00000585420 A0A0J9YYE9 177 aa16.7■□□□□ 0.26
GCDH-203ENST00000585420 A0A1W2PQU0 124 aa16.7■□□□□ 0.26
GCDH-203ENST00000585420 LNP1A1A4G5 178 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms