RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 GM2AP17900 193 aa16.12■□□□□ 0.17
SS18-226ENST00000585241 SPINT3P49223 89 aa16.12■□□□□ 0.17
SS18-226ENST00000585241 XIAPP98170 497 aa16.12■□□□□ 0.17
SS18-226ENST00000585241 SEMG2Q02383 582 aa16.12■□□□□ 0.17
SS18-226ENST00000585241 PTPRCAPQ14761 206 aa16.12■□□□□ 0.17
SS18-226ENST00000585241 RASA2Q15283 850 aa16.12■□□□□ 0.17
SS18-226ENST00000585241 KBTBD12Q3ZCT8 623 aa16.12■□□□□ 0.17
SS18-226ENST00000585241 AFTPHQ6ULP2 937 aa16.12■□□□□ 0.17
SS18-226ENST00000585241 MARK2Q7KZI7 788 aaKnown RBP16.12■□□□□ 0.17
SS18-226ENST00000585241 KCNMB4Q86W47 210 aa16.12■□□□□ 0.17
SS18-226ENST00000585241 RASSF3Q86WH2 238 aa16.12■□□□□ 0.17
SS18-226ENST00000585241 UNC5BQ8IZJ1 945 aa16.12■□□□□ 0.17
SS18-226ENST00000585241 UHMK1Q8TAS1 419 aaKnown RBP16.12■□□□□ 0.17
SS18-226ENST00000585241 SCG3Q8WXD2 468 aaKnown RBP16.12■□□□□ 0.17
SS18-226ENST00000585241 HDAC10Q969S8 669 aa16.12■□□□□ 0.17
SS18-226ENST00000585241 DHRS4Q9BTZ2 278 aa16.12■□□□□ 0.17
SS18-226ENST00000585241 ROPN1BQ9BZX4 212 aaPredicted RBP16.12■□□□□ 0.17
SS18-226ENST00000585241 ROPN1Q9HAT0 212 aaPredicted RBP16.12■□□□□ 0.17
SS18-226ENST00000585241 C20orf96Q9NUD7 363 aaPredicted RBP16.12■□□□□ 0.17
SS18-226ENST00000585241 C2orf42Q9NWW7 574 aa16.12■□□□□ 0.17
SS18-226ENST00000585241 FBXL12Q9NXK8 326 aa16.12■□□□□ 0.17
SS18-226ENST00000585241 DLGAP2Q9P1A6 1054 aa16.12■□□□□ 0.17
SS18-226ENST00000585241 VPS18Q9P253 973 aa16.12■□□□□ 0.17
SS18-226ENST00000585241 USP36Q9P275 1121 aaKnown RBP16.12■□□□□ 0.17
SS18-226ENST00000585241 FKBPLQ9UIM3 349 aa16.12■□□□□ 0.17
SS18-226ENST00000585241 ITM2BQ9Y287 266 aa16.12■□□□□ 0.17
SS18-226ENST00000585241 CCDC162PA2VCL2 907 aa16.11■□□□□ 0.17
SS18-226ENST00000585241 GAPDHSO14556 408 aaPredicted RBP16.11■□□□□ 0.17
SS18-226ENST00000585241 GCAP28676 217 aa16.11■□□□□ 0.17
SS18-226ENST00000585241 PRAMEP78395 509 aa16.11■□□□□ 0.17
SS18-226ENST00000585241 PEX6Q13608 980 aa16.11■□□□□ 0.17
SS18-226ENST00000585241 TEDDM1Q5T9Z0 273 aa16.11■□□□□ 0.17
SS18-226ENST00000585241 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.11■□□□□ 0.17
SS18-226ENST00000585241 CYP2U1Q7Z449 544 aa16.11■□□□□ 0.17
SS18-226ENST00000585241 HSD11B1LQ7Z5J1 315 aa16.11■□□□□ 0.17
SS18-226ENST00000585241 TECPR1Q7Z6L1 1165 aa16.11■□□□□ 0.17
SS18-226ENST00000585241 CACUL1Q86Y37 369 aa16.11■□□□□ 0.17
SS18-226ENST00000585241 TDRPQ86YL5 185 aa16.11■□□□□ 0.17
SS18-226ENST00000585241 GPR150Q8NGU9 434 aa16.11■□□□□ 0.17
SS18-226ENST00000585241 CDKL2Q92772 493 aa16.11■□□□□ 0.17
SS18-226ENST00000585241 COQ10AQ96MF6 247 aa16.11■□□□□ 0.17
SS18-226ENST00000585241 PLEKHG4BQ96PX9 1271 aa16.11■□□□□ 0.17
SS18-226ENST00000585241 OMDQ99983 421 aa16.11■□□□□ 0.17
SS18-226ENST00000585241 CCDC77Q9BR77 488 aa16.11■□□□□ 0.17
SS18-226ENST00000585241 FAM167BQ9BTA0 163 aa16.11■□□□□ 0.17
SS18-226ENST00000585241 CDH19Q9H159 772 aa16.11■□□□□ 0.17
SS18-226ENST00000585241 KDM4CQ9H3R0 1056 aa16.11■□□□□ 0.17
SS18-226ENST00000585241 RAD18Q9NS91 495 aa16.11■□□□□ 0.17
SS18-226ENST00000585241 EURLQ9NYK6 297 aa16.11■□□□□ 0.17
SS18-226ENST00000585241 PKD2L2Q9NZM6 624 aa16.11■□□□□ 0.17
SS18-226ENST00000585241 EXOC1LA0A1B0GW35 172 aa16.1■□□□□ 0.17
SS18-226ENST00000585241 A8MX80 341 aa16.1■□□□□ 0.17
SS18-226ENST00000585241 CXorf49A8MYA2 514 aaPredicted RBP16.1■□□□□ 0.17
SS18-226ENST00000585241 CCL22O00626 93 aa16.1■□□□□ 0.17
SS18-226ENST00000585241 RNASEH2AO75792 299 aaKnown RBP16.1■□□□□ 0.17
SS18-226ENST00000585241 GOT2P00505 430 aaKnown RBP16.1■□□□□ 0.17
SS18-226ENST00000585241 SLC4A1P02730 911 aa16.1■□□□□ 0.17
SS18-226ENST00000585241 IVLP07476 585 aa16.1■□□□□ 0.17
SS18-226ENST00000585241 ELFN1P0C7U0 828 aa16.1■□□□□ 0.17
SS18-226ENST00000585241 ERVK-10P10266 1014 aa16.1■□□□□ 0.17
SS18-226ENST00000585241 FOXN2P32314 431 aa16.1■□□□□ 0.17
SS18-226ENST00000585241 SPAM1P38567 509 aa16.1■□□□□ 0.17
SS18-226ENST00000585241 LIG3P49916 1009 aa16.1■□□□□ 0.17
SS18-226ENST00000585241 ADPRHP54922 357 aa16.1■□□□□ 0.17
SS18-226ENST00000585241 ZNF844Q08AG5 666 aa16.1■□□□□ 0.17
SS18-226ENST00000585241 EFTUD2Q15029 972 aaKnown RBP eCLIP16.1■□□□□ 0.175e-13■■■■■ 88.9
SS18-226ENST00000585241 AGERQ15109 404 aa16.1■□□□□ 0.17
SS18-226ENST00000585241 HSP90AA5PQ58FG0 334 aa16.1■□□□□ 0.17
SS18-226ENST00000585241 NEPROQ6NW34 567 aa16.1■□□□□ 0.17
SS18-226ENST00000585241 KIAA1324Q6UXG2 1013 aaKnown RBP16.1■□□□□ 0.17
SS18-226ENST00000585241 KIAA0408Q6ZU52 694 aa16.1■□□□□ 0.17
SS18-226ENST00000585241 ZNF765Q7L2R6 523 aa16.1■□□□□ 0.17
SS18-226ENST00000585241 GALNT7Q86SF2 657 aa16.1■□□□□ 0.17
SS18-226ENST00000585241 CROCCP2Q86T23 111 aa16.1■□□□□ 0.17
SS18-226ENST00000585241 SLC26A11Q86WA9 606 aa16.1■□□□□ 0.17
SS18-226ENST00000585241 LRRC6Q86X45 466 aa16.1■□□□□ 0.17
SS18-226ENST00000585241 NRSN1Q8IZ57 195 aa16.1■□□□□ 0.17
SS18-226ENST00000585241 TSTD1Q8NFU3 115 aa16.1■□□□□ 0.17
SS18-226ENST00000585241 OR2W6PQ8NHA6 318 aa16.1■□□□□ 0.17
SS18-226ENST00000585241 CALML6Q8TD86 181 aa16.1■□□□□ 0.17
SS18-226ENST00000585241 SLC44A1Q8WWI5 657 aa16.1■□□□□ 0.17
SS18-226ENST00000585241 PKNOX2Q96KN3 472 aa16.1■□□□□ 0.17
SS18-226ENST00000585241 PREBQ9HCU5 417 aa16.1■□□□□ 0.17
SS18-226ENST00000585241 BPIFA1Q9NP55 256 aa16.1■□□□□ 0.17
SS18-226ENST00000585241 IL26Q9NPH9 171 aa16.1■□□□□ 0.17
SS18-226ENST00000585241 ITM2CQ9NQX7 267 aa16.1■□□□□ 0.17
SS18-226ENST00000585241 NSMCE4AQ9NXX6 385 aa16.1■□□□□ 0.17
SS18-226ENST00000585241 IL1RAPL1Q9NZN1 696 aa16.1■□□□□ 0.17
SS18-226ENST00000585241 SLC24A2Q9UI40 661 aa16.1■□□□□ 0.17
SS18-226ENST00000585241 APPL1Q9UKG1 709 aa16.1■□□□□ 0.17
SS18-226ENST00000585241 NCKAP1Q9Y2A7 1128 aa16.1■□□□□ 0.17
SS18-226ENST00000585241 PLXNA2O75051 1894 aa16.1■□□□□ 0.17
SS18-226ENST00000585241 TRIOO75962 3097 aa16.09■□□□□ 0.17
SS18-226ENST00000585241 AGAP14A8MT82 685 aa16.09■□□□□ 0.17
SS18-226ENST00000585241 AGPSO00116 658 aa16.09■□□□□ 0.17
SS18-226ENST00000585241 STK25O00506 426 aa16.09■□□□□ 0.17
SS18-226ENST00000585241 ACADMP11310 421 aa16.09■□□□□ 0.17
SS18-226ENST00000585241 C6P13671 934 aa16.09■□□□□ 0.17
SS18-226ENST00000585241 AOC1P19801 751 aa16.09■□□□□ 0.17
SS18-226ENST00000585241 OGNP20774 298 aaKnown RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms