RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 CTIFO43310 598 aaKnown RBP18.29■□□□□ 0.52
RFFL-211ENST00000584541 BUD23O43709 281 aaKnown RBP18.29■□□□□ 0.52
RFFL-211ENST00000584541 MAGEA4P43358 317 aa18.29■□□□□ 0.52
RFFL-211ENST00000584541 SPINT3P49223 89 aa18.29■□□□□ 0.52
RFFL-211ENST00000584541 ZNF140P52738 457 aaPredicted RBP18.29■□□□□ 0.52
RFFL-211ENST00000584541 ZNF528Q3MIS6 628 aa18.29■□□□□ 0.52
RFFL-211ENST00000584541 MAP9Q49MG5 647 aa18.29■□□□□ 0.52
RFFL-211ENST00000584541 HSD11B1LQ7Z5J1 315 aa18.29■□□□□ 0.52
RFFL-211ENST00000584541 C11orf74Q86VG3 221 aa18.29■□□□□ 0.52
RFFL-211ENST00000584541 TRIM69Q86WT6 500 aa18.29■□□□□ 0.52
RFFL-211ENST00000584541 PALM2Q8IXS6 379 aa18.29■□□□□ 0.52
RFFL-211ENST00000584541 NRSN1Q8IZ57 195 aa18.29■□□□□ 0.52
RFFL-211ENST00000584541 AGGF1Q8N302 714 aaeCLIP18.29■□□□□ 0.52
RFFL-211ENST00000584541 FAM160A2Q8N612 972 aaPredicted RBP18.29■□□□□ 0.52
RFFL-211ENST00000584541 ZNF669Q96BR6 464 aaPredicted RBP18.29■□□□□ 0.52
RFFL-211ENST00000584541 CDH19Q9H159 772 aa18.29■□□□□ 0.52
RFFL-211ENST00000584541 PCED1AQ9H1Q7 454 aa18.29■□□□□ 0.52
RFFL-211ENST00000584541 BPIFA1Q9NP55 256 aa18.29■□□□□ 0.52
RFFL-211ENST00000584541 NLE1Q9NVX2 485 aaPredicted RBP18.29■□□□□ 0.52
RFFL-211ENST00000584541 INVSQ9Y283 1065 aa18.29■□□□□ 0.52
RFFL-211ENST00000584541 RPS6KL1Q9Y6S9 549 aa18.29■□□□□ 0.52
RFFL-211ENST00000584541 USP1O94782 785 aa18.28■□□□□ 0.52
RFFL-211ENST00000584541 MYBL2P10244 700 aa18.28■□□□□ 0.52
RFFL-211ENST00000584541 NMBRP28336 390 aa18.28■□□□□ 0.52
RFFL-211ENST00000584541 CCR5P51681 352 aa18.28■□□□□ 0.52
RFFL-211ENST00000584541 PTPN5P54829 565 aa18.28■□□□□ 0.52
RFFL-211ENST00000584541 PRAMEP78395 509 aa18.28■□□□□ 0.52
RFFL-211ENST00000584541 TMPRSS15P98073 1019 aa18.28■□□□□ 0.52
RFFL-211ENST00000584541 FASTKD3Q14CZ7 662 aaKnown RBP18.28■□□□□ 0.52
RFFL-211ENST00000584541 ANGPT1Q15389 498 aa18.28■□□□□ 0.52
RFFL-211ENST00000584541 SPANXN3Q5MJ09 141 aa18.28■□□□□ 0.52
RFFL-211ENST00000584541 SEL1L3Q68CR1 1132 aa18.28■□□□□ 0.52
RFFL-211ENST00000584541 KIAA0895LQ68EN5 471 aa18.28■□□□□ 0.52
RFFL-211ENST00000584541 Q6ZVL8 140 aa18.28■□□□□ 0.52
RFFL-211ENST00000584541 CYP2U1Q7Z449 544 aa18.28■□□□□ 0.52
RFFL-211ENST00000584541 TMEM135Q86UB9 458 aa18.28■□□□□ 0.52
RFFL-211ENST00000584541 RELL1Q8IUW5 271 aa18.28■□□□□ 0.52
RFFL-211ENST00000584541 CBARPQ8N350 705 aaPredicted RBP18.28■□□□□ 0.52
RFFL-211ENST00000584541 OR13C4Q8NGS5 318 aa18.28■□□□□ 0.52
RFFL-211ENST00000584541 EID2BQ96D98 161 aa18.28■□□□□ 0.52
RFFL-211ENST00000584541 NUS1Q96E22 293 aa18.28■□□□□ 0.52
RFFL-211ENST00000584541 CFAP36Q96G28 342 aa18.28■□□□□ 0.52
RFFL-211ENST00000584541 DNAJC1Q96KC8 554 aaKnown RBP18.28■□□□□ 0.52
RFFL-211ENST00000584541 COQ10AQ96MF6 247 aa18.28■□□□□ 0.52
RFFL-211ENST00000584541 SLC17A9Q9BYT1 436 aa18.28■□□□□ 0.52
RFFL-211ENST00000584541 ZFR2Q9UPR6 939 aaKnown RBP18.28■□□□□ 0.52
RFFL-211ENST00000584541 COQ6Q9Y2Z9 468 aa18.28■□□□□ 0.52
RFFL-211ENST00000584541 KCTD3Q9Y597 815 aa18.28■□□□□ 0.52
RFFL-211ENST00000584541 GOLGA8CPA6NN73 597 aa18.27■□□□□ 0.52
RFFL-211ENST00000584541 RPP40O75818 363 aaKnown RBP18.27■□□□□ 0.52
RFFL-211ENST00000584541 RECQL5O94762 991 aaPredicted RBP18.27■□□□□ 0.52
RFFL-211ENST00000584541 NUDT1P36639 197 aa18.27■□□□□ 0.52
RFFL-211ENST00000584541 SPAM1P38567 509 aa18.27■□□□□ 0.52
RFFL-211ENST00000584541 ETV3P41162 512 aa18.27■□□□□ 0.52
RFFL-211ENST00000584541 DCDC1P59894 354 aa18.27■□□□□ 0.52
RFFL-211ENST00000584541 PPP2CBP62714 309 aa18.27■□□□□ 0.52
RFFL-211ENST00000584541 PPP2CAP67775 309 aa18.27■□□□□ 0.52
RFFL-211ENST00000584541 RPL6Q02878 288 aaKnown RBP18.27■□□□□ 0.52
RFFL-211ENST00000584541 CREB5Q02930 508 aa18.27■□□□□ 0.52
RFFL-211ENST00000584541 ANKRD20A4Q4UJ75 823 aa18.27■□□□□ 0.52
RFFL-211ENST00000584541 TMEM259Q4ZIN3 620 aa18.27■□□□□ 0.52
RFFL-211ENST00000584541 SETMARQ53H47 684 aaPredicted RBP18.27■□□□□ 0.52
RFFL-211ENST00000584541 ESRP1Q6NXG1 681 aaKnown RBP18.27■□□□□ 0.52
RFFL-211ENST00000584541 TECPR1Q7Z6L1 1165 aa18.27■□□□□ 0.52
RFFL-211ENST00000584541 FRMD1Q8N878 549 aa18.27■□□□□ 0.52
RFFL-211ENST00000584541 CADM4Q8NFZ8 388 aa18.27■□□□□ 0.52
RFFL-211ENST00000584541 ASB12Q8WXK4 309 aa18.27■□□□□ 0.52
RFFL-211ENST00000584541 MFSD3Q96ES6 412 aa18.27■□□□□ 0.52
RFFL-211ENST00000584541 DTD2Q96FN9 168 aa18.27■□□□□ 0.52
RFFL-211ENST00000584541 C9orf72Q96LT7 481 aa18.27■□□□□ 0.52
RFFL-211ENST00000584541 TTC25Q96NG3 672 aa18.27■□□□□ 0.52
RFFL-211ENST00000584541 PLEKHG4BQ96PX9 1271 aa18.27■□□□□ 0.52
RFFL-211ENST00000584541 C1QTNF2Q9BXJ5 285 aa18.27■□□□□ 0.52
RFFL-211ENST00000584541 FAM83DQ9H4H8 585 aa18.27■□□□□ 0.52
RFFL-211ENST00000584541 C6orf106Q9H6K1 298 aaPredicted RBP18.27■□□□□ 0.52
RFFL-211ENST00000584541 TREX1Q9NSU2 369 aa18.27■□□□□ 0.52
RFFL-211ENST00000584541 APPL1Q9UKG1 709 aa18.27■□□□□ 0.52
RFFL-211ENST00000584541 DOCK9Q9BZ29 2069 aa18.27■□□□□ 0.51
RFFL-211ENST00000584541 GALR2O43603 387 aaPredicted RBP18.26■□□□□ 0.51
RFFL-211ENST00000584541 ERLIN1O75477 346 aa18.26■□□□□ 0.51
RFFL-211ENST00000584541 FSBPO95073 299 aa18.26■□□□□ 0.51
RFFL-211ENST00000584541 GSTA2P09210 222 aa18.26■□□□□ 0.51
RFFL-211ENST00000584541 FAM153BP0C7A2 387 aa18.26■□□□□ 0.51
RFFL-211ENST00000584541 BPIP17213 487 aa18.26■□□□□ 0.51
RFFL-211ENST00000584541 MAT2AP31153 395 aaKnown RBP18.26■□□□□ 0.51
RFFL-211ENST00000584541 CNR2P34972 360 aa18.26■□□□□ 0.51
RFFL-211ENST00000584541 ACVR1Q04771 509 aa18.26■□□□□ 0.51
RFFL-211ENST00000584541 PTPRCAPQ14761 206 aa18.26■□□□□ 0.51
RFFL-211ENST00000584541 AGERQ15109 404 aa18.26■□□□□ 0.51
RFFL-211ENST00000584541 ZNF284Q2VY69 593 aa18.26■□□□□ 0.51
RFFL-211ENST00000584541 FAM153CQ494X1 144 aa18.26■□□□□ 0.51
RFFL-211ENST00000584541 EMBQ6PCB8 327 aa18.26■□□□□ 0.51
RFFL-211ENST00000584541 CES3Q6UWW8 571 aa18.26■□□□□ 0.51
RFFL-211ENST00000584541 ZNF765Q7L2R6 523 aa18.26■□□□□ 0.51
RFFL-211ENST00000584541 IGDCC3Q8IVU1 814 aa18.26■□□□□ 0.51
RFFL-211ENST00000584541 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.26■□□□□ 0.51
RFFL-211ENST00000584541 GAB3Q8WWW8 586 aa18.26■□□□□ 0.51
RFFL-211ENST00000584541 KLK6Q92876 244 aa18.26■□□□□ 0.51
RFFL-211ENST00000584541 CDKN2AIPNLQ96HQ2 116 aa18.26■□□□□ 0.51
RFFL-211ENST00000584541 ZNF778Q96MU6 729 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms