RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 MAPK15Q8TD08 544 aa11.18□□□□□ -0.62
CCDC47-206ENST00000584112 LMX1AQ8TE12 382 aa11.18□□□□□ -0.62
CCDC47-206ENST00000584112 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.18□□□□□ -0.62
CCDC47-206ENST00000584112 IP6K2Q9UHH9 426 aa11.18□□□□□ -0.62
CCDC47-206ENST00000584112 KLF15Q9UIH9 416 aa11.18□□□□□ -0.62
CCDC47-206ENST00000584112 SALL4Q9UJQ4 1053 aa11.18□□□□□ -0.62
CCDC47-206ENST00000584112 ATP8A1Q9Y2Q0 1164 aa11.18□□□□□ -0.62
CCDC47-206ENST00000584112 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.17□□□□□ -0.62
CCDC47-206ENST00000584112 CFAP69A5D8W1 941 aa11.17□□□□□ -0.62
CCDC47-206ENST00000584112 LZTS3O60299 673 aaPredicted RBP11.17□□□□□ -0.62
CCDC47-206ENST00000584112 BUB1BO60566 1050 aaPredicted RBP11.17□□□□□ -0.62
CCDC47-206ENST00000584112 TPM3P06753 285 aa11.17□□□□□ -0.62
CCDC47-206ENST00000584112 ANXA6P08133 673 aa11.17□□□□□ -0.62
CCDC47-206ENST00000584112 ITIH2P19823 946 aa11.17□□□□□ -0.62
CCDC47-206ENST00000584112 HTR1BP28222 390 aa11.17□□□□□ -0.62
CCDC47-206ENST00000584112 SERPINB6P35237 376 aa11.17□□□□□ -0.62
CCDC47-206ENST00000584112 RPIAP49247 311 aa11.17□□□□□ -0.62
CCDC47-206ENST00000584112 AP1S1P61966 158 aa11.17□□□□□ -0.62
CCDC47-206ENST00000584112 PPARDQ03181 441 aa11.17□□□□□ -0.62
CCDC47-206ENST00000584112 ZNF235Q14590 738 aa11.17□□□□□ -0.62
CCDC47-206ENST00000584112 LBRQ14739 615 aaKnown RBP11.17□□□□□ -0.62
CCDC47-206ENST00000584112 SMTNL2Q2TAL5 461 aa11.17□□□□□ -0.62
CCDC47-206ENST00000584112 DEFB133Q30KQ1 61 aa11.17□□□□□ -0.62
CCDC47-206ENST00000584112 TPRG1LQ5T0D9 272 aa11.17□□□□□ -0.62
CCDC47-206ENST00000584112 FAXCQ5TGI0 409 aa11.17□□□□□ -0.62
CCDC47-206ENST00000584112 TMCO3Q6UWJ1 677 aa11.17□□□□□ -0.62
CCDC47-206ENST00000584112 BBS5Q8N3I7 341 aa11.17□□□□□ -0.62
CCDC47-206ENST00000584112 NIPA2Q8N8Q9 360 aa11.17□□□□□ -0.62
CCDC47-206ENST00000584112 ATL2Q8NHH9 583 aa11.17□□□□□ -0.62
CCDC47-206ENST00000584112 TPCN2Q8NHX9 752 aa11.17□□□□□ -0.62
CCDC47-206ENST00000584112 IFI44Q8TCB0 444 aa11.17□□□□□ -0.62
CCDC47-206ENST00000584112 TEKT4Q8WW24 435 aa11.17□□□□□ -0.62
CCDC47-206ENST00000584112 HSPH1Q92598 858 aa11.17□□□□□ -0.62
CCDC47-206ENST00000584112 PSKH2Q96QS6 385 aa11.17□□□□□ -0.62
CCDC47-206ENST00000584112 SLC12A9Q9BXP2 914 aa11.17□□□□□ -0.62
CCDC47-206ENST00000584112 MBNL1Q9NR56 388 aaKnown RBP11.17□□□□□ -0.62
CCDC47-206ENST00000584112 ERRFI1Q9UJM3 462 aaPredicted RBP11.17□□□□□ -0.62
CCDC47-206ENST00000584112 ANAPC7Q9UJX3 599 aa11.17□□□□□ -0.62
CCDC47-206ENST00000584112 CAPN11Q9UMQ6 739 aa11.17□□□□□ -0.62
CCDC47-206ENST00000584112 COQ6Q9Y2Z9 468 aa11.17□□□□□ -0.62
CCDC47-206ENST00000584112 LUC7L2Q9Y383 392 aaKnown RBP11.17□□□□□ -0.62
CCDC47-206ENST00000584112 LY6G6EA0A0G2JKS1 128 aa11.16□□□□□ -0.62
CCDC47-206ENST00000584112 A0A1W2PQ67 120 aa11.16□□□□□ -0.62
CCDC47-206ENST00000584112 PRR19A6NJB7 356 aa11.16□□□□□ -0.62
CCDC47-206ENST00000584112 LMO7DNF2Z398 122 aa11.16□□□□□ -0.62
CCDC47-206ENST00000584112 ELFN1P0C7U0 828 aa11.16□□□□□ -0.62
CCDC47-206ENST00000584112 RARAP10276 462 aa11.16□□□□□ -0.62
CCDC47-206ENST00000584112 NFKBIAP25963 317 aa11.16□□□□□ -0.62
CCDC47-206ENST00000584112 IL1R2P27930 398 aa11.16□□□□□ -0.62
CCDC47-206ENST00000584112 RGRP47804 291 aa11.16□□□□□ -0.62
CCDC47-206ENST00000584112 LIG3P49916 1009 aa11.16□□□□□ -0.62
CCDC47-206ENST00000584112 SCNN1BP51168 640 aa11.16□□□□□ -0.62
CCDC47-206ENST00000584112 KLRB1Q12918 225 aa11.16□□□□□ -0.62
CCDC47-206ENST00000584112 MTM1Q13496 603 aa11.16□□□□□ -0.62
CCDC47-206ENST00000584112 NFATC4Q14934 902 aa11.16□□□□□ -0.62
CCDC47-206ENST00000584112 ELOCQ15369 112 aa11.16□□□□□ -0.62
CCDC47-206ENST00000584112 NR0B2Q15466 257 aa11.16□□□□□ -0.62
CCDC47-206ENST00000584112 NFKBIBQ15653 356 aa11.16□□□□□ -0.62
CCDC47-206ENST00000584112 WSCD2Q2TBF2 565 aa11.16□□□□□ -0.62
CCDC47-206ENST00000584112 PRRT3Q5FWE3 981 aa11.16□□□□□ -0.62
CCDC47-206ENST00000584112 ALKBH5Q6P6C2 394 aaKnown RBP11.16□□□□□ -0.62
CCDC47-206ENST00000584112 ARHGAP36Q6ZRI8 547 aa11.16□□□□□ -0.62
CCDC47-206ENST00000584112 TIPARPQ7Z3E1 657 aaKnown RBP11.16□□□□□ -0.62
CCDC47-206ENST00000584112 POLNQ7Z5Q5 900 aa11.16□□□□□ -0.62
CCDC47-206ENST00000584112 RBFAQ8N0V3 343 aa11.16□□□□□ -0.62
CCDC47-206ENST00000584112 SLC34A3Q8N130 599 aa11.16□□□□□ -0.62
CCDC47-206ENST00000584112 SDR16C5Q8N3Y7 309 aa11.16□□□□□ -0.62
CCDC47-206ENST00000584112 FSTL5Q8N475 847 aaPredicted RBP11.16□□□□□ -0.62
CCDC47-206ENST00000584112 ATPAF2Q8N5M1 289 aa11.16□□□□□ -0.62
CCDC47-206ENST00000584112 WDR36Q8NI36 951 aaKnown RBP11.16□□□□□ -0.62
CCDC47-206ENST00000584112 NSMCE1Q8WV22 266 aa11.16□□□□□ -0.62
CCDC47-206ENST00000584112 CPLX3Q8WVH0 158 aa11.16□□□□□ -0.62
CCDC47-206ENST00000584112 SCG3Q8WXD2 468 aaKnown RBP11.16□□□□□ -0.62
CCDC47-206ENST00000584112 NAT6Q93015 286 aa11.16□□□□□ -0.62
CCDC47-206ENST00000584112 ECHDC3Q96DC8 303 aa11.16□□□□□ -0.62
CCDC47-206ENST00000584112 LURAP1Q96LR2 239 aa11.16□□□□□ -0.62
CCDC47-206ENST00000584112 CSPG4P5Q96PW8 444 aa11.16□□□□□ -0.62
CCDC47-206ENST00000584112 APOOQ9BUR5 198 aa11.16□□□□□ -0.62
CCDC47-206ENST00000584112 LRRC61Q9BV99 259 aa11.16□□□□□ -0.62
CCDC47-206ENST00000584112 NUP85Q9BW27 656 aa11.16□□□□□ -0.62
CCDC47-206ENST00000584112 THAP2Q9H0W7 228 aa11.16□□□□□ -0.62
CCDC47-206ENST00000584112 DOLKQ9UPQ8 538 aa11.16□□□□□ -0.62
CCDC47-206ENST00000584112 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.16□□□□□ -0.628e-9■□□□□ 9.1
CCDC47-206ENST00000584112 U3KQA8 63 aa11.16□□□□□ -0.62
CCDC47-206ENST00000584112 DIDO1Q9BTC0 2240 aaKnown RBP11.16□□□□□ -0.62
CCDC47-206ENST00000584112 ACANP16112 2415 aa11.16□□□□□ -0.62
CCDC47-206ENST00000584112 COL6A5A8TX70 2615 aa11.16□□□□□ -0.62
CCDC47-206ENST00000584112 JMJD1CQ15652 2540 aa11.15□□□□□ -0.62
CCDC47-206ENST00000584112 CROCCQ5TZA2 2017 aa11.15□□□□□ -0.62
CCDC47-206ENST00000584112 A0A087X0T9 212 aa11.15□□□□□ -0.62
CCDC47-206ENST00000584112 CPED1A4D0V7 1026 aa11.15□□□□□ -0.62
CCDC47-206ENST00000584112 EME2A4GXA9 379 aaPredicted RBP11.15□□□□□ -0.62
CCDC47-206ENST00000584112 MYO1FO00160 1098 aa11.15□□□□□ -0.62
CCDC47-206ENST00000584112 SOCS5O75159 536 aa11.15□□□□□ -0.62
CCDC47-206ENST00000584112 RASGRP1O95267 797 aa11.15□□□□□ -0.62
CCDC47-206ENST00000584112 NADKO95544 446 aaPredicted RBP11.15□□□□□ -0.62
CCDC47-206ENST00000584112 CYP1A2P05177 515 aa11.15□□□□□ -0.62
CCDC47-206ENST00000584112 ALPIP09923 528 aa11.15□□□□□ -0.62
CCDC47-206ENST00000584112 FAM228BP0C875 321 aa11.15□□□□□ -0.62
CCDC47-206ENST00000584112 LIPCP11150 499 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms