RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 HMCESQ96FZ2 354 aa5.36□□□□□ -1.55
VAPA-207ENST00000583879 WDR92Q96MX6 357 aa5.36□□□□□ -1.55
VAPA-207ENST00000583879 GDAP1L1Q96MZ0 367 aa5.36□□□□□ -1.55
VAPA-207ENST00000583879 TAAR9Q96RI9 348 aa5.36□□□□□ -1.55
VAPA-207ENST00000583879 MAGEB5Q9BZ81 275 aa5.36□□□□□ -1.55
VAPA-207ENST00000583879 EPN3Q9H201 632 aa5.36□□□□□ -1.55
VAPA-207ENST00000583879 RDH14Q9HBH5 336 aa5.36□□□□□ -1.55
VAPA-207ENST00000583879 MRPL40Q9NQ50 206 aaKnown RBP5.36□□□□□ -1.55
VAPA-207ENST00000583879 TMEM248Q9NWD8 314 aa5.36□□□□□ -1.55
VAPA-207ENST00000583879 TUBD1Q9UJT1 453 aa5.36□□□□□ -1.55
VAPA-207ENST00000583879 ANAPC2Q9UJX6 822 aa5.36□□□□□ -1.55
VAPA-207ENST00000583879 DNAJC12Q9UKB3 198 aa5.36□□□□□ -1.55
VAPA-207ENST00000583879 RNF112Q9ULX5 631 aa5.36□□□□□ -1.55
VAPA-207ENST00000583879 COQ6Q9Y2Z9 468 aa5.36□□□□□ -1.55
VAPA-207ENST00000583879 DAAM1Q9Y4D1 1078 aa5.36□□□□□ -1.55
VAPA-207ENST00000583879 PCDHGA3Q9Y5H0 932 aa5.36□□□□□ -1.55
VAPA-207ENST00000583879 COL12A1Q99715 3063 aa5.35□□□□□ -1.55
VAPA-207ENST00000583879 COL27A1Q8IZC6 1860 aaPredicted RBP5.35□□□□□ -1.55
VAPA-207ENST00000583879 KRTAP4-8A0A0G2JLE6 195 aa5.35□□□□□ -1.55
VAPA-207ENST00000583879 CFAP69A5D8W1 941 aa5.35□□□□□ -1.55
VAPA-207ENST00000583879 FAM72CH0Y354 149 aa5.35□□□□□ -1.55
VAPA-207ENST00000583879 GOLGA8SH3BPF8 625 aa5.35□□□□□ -1.55
VAPA-207ENST00000583879 CACNB4O00305 520 aaPredicted RBP5.35□□□□□ -1.55
VAPA-207ENST00000583879 HGSO14964 777 aaPredicted RBP5.35□□□□□ -1.55
VAPA-207ENST00000583879 INSIG1O15503 277 aa5.35□□□□□ -1.55
VAPA-207ENST00000583879 ZW10O43264 779 aa5.35□□□□□ -1.55
VAPA-207ENST00000583879 PAX4O43316 350 aa5.35□□□□□ -1.55
VAPA-207ENST00000583879 TMCC1O94876 653 aa5.35□□□□□ -1.55
VAPA-207ENST00000583879 LRIG2O94898 1065 aa5.35□□□□□ -1.55
VAPA-207ENST00000583879 IGSF6O95976 241 aa5.35□□□□□ -1.55
VAPA-207ENST00000583879 FGF1P05230 155 aa5.35□□□□□ -1.55
VAPA-207ENST00000583879 PLEKP08567 350 aaPredicted RBP5.35□□□□□ -1.55
VAPA-207ENST00000583879 HOXC4P09017 264 aaPredicted RBP5.35□□□□□ -1.55
VAPA-207ENST00000583879 CYP11B1P15538 503 aa5.35□□□□□ -1.55
VAPA-207ENST00000583879 CD1CP29017 333 aa5.35□□□□□ -1.55
VAPA-207ENST00000583879 ALDH4A1P30038 563 aa5.35□□□□□ -1.55
VAPA-207ENST00000583879 UGT1A3P35503 534 aa5.35□□□□□ -1.55
VAPA-207ENST00000583879 TRIM23P36406 574 aa5.35□□□□□ -1.55
VAPA-207ENST00000583879 LIG3P49916 1009 aa5.35□□□□□ -1.55
VAPA-207ENST00000583879 ARSDP51689 593 aa5.35□□□□□ -1.55
VAPA-207ENST00000583879 OR1D5P58170 312 aa5.35□□□□□ -1.55
VAPA-207ENST00000583879 YBEYP58557 167 aaPredicted RBP5.35□□□□□ -1.55
VAPA-207ENST00000583879 RHOAP61586 193 aa5.35□□□□□ -1.55
VAPA-207ENST00000583879 ATP11AP98196 1134 aa5.35□□□□□ -1.55
VAPA-207ENST00000583879 PAK1Q13153 545 aa5.35□□□□□ -1.55
VAPA-207ENST00000583879 MTM1Q13496 603 aa5.35□□□□□ -1.55
VAPA-207ENST00000583879 SQSTM1Q13501 440 aa5.35□□□□□ -1.55
VAPA-207ENST00000583879 GRM3Q14832 879 aa5.35□□□□□ -1.55
VAPA-207ENST00000583879 NCAPHQ15003 741 aa5.35□□□□□ -1.55
VAPA-207ENST00000583879 CYTH1Q15438 398 aa5.35□□□□□ -1.55
VAPA-207ENST00000583879 RAB6CQ53S08 254 aa5.35□□□□□ -1.55
VAPA-207ENST00000583879 C2CD6Q53TS8 623 aa5.35□□□□□ -1.55
VAPA-207ENST00000583879 FAM72AQ5TYM5 149 aa5.35□□□□□ -1.55
VAPA-207ENST00000583879 MANEALQ5VSG8 457 aa5.35□□□□□ -1.55
VAPA-207ENST00000583879 FAM72DQ6L9T8 149 aa5.35□□□□□ -1.55
VAPA-207ENST00000583879 ERAP2Q6P179 960 aa5.35□□□□□ -1.55
VAPA-207ENST00000583879 C17orf82Q86X59 251 aaPredicted RBP5.35□□□□□ -1.55
VAPA-207ENST00000583879 FAM72BQ86X60 149 aa5.35□□□□□ -1.55
VAPA-207ENST00000583879 FAM26EQ8N5C1 309 aa5.35□□□□□ -1.55
VAPA-207ENST00000583879 IL22RA1Q8N6P7 574 aa5.35□□□□□ -1.55
VAPA-207ENST00000583879 NETO2Q8NC67 525 aa5.35□□□□□ -1.55
VAPA-207ENST00000583879 PLA2G15Q8NCC3 412 aa5.35□□□□□ -1.55
VAPA-207ENST00000583879 RCBTB1Q8NDN9 531 aa5.35□□□□□ -1.55
VAPA-207ENST00000583879 CCL4L1Q8NHW4 92 aa5.35□□□□□ -1.55
VAPA-207ENST00000583879 OR1E3Q8WZA6 343 aa5.35□□□□□ -1.55
VAPA-207ENST00000583879 FUBP1Q96AE4 644 aaKnown RBP5.35□□□□□ -1.55
VAPA-207ENST00000583879 PDXPQ96GD0 296 aa5.35□□□□□ -1.55
VAPA-207ENST00000583879 ZNF641Q96N77 438 aaPredicted RBP5.35□□□□□ -1.55
VAPA-207ENST00000583879 CATSPER2Q96P56 530 aa5.35□□□□□ -1.55
VAPA-207ENST00000583879 SSBP4Q9BWG4 385 aaPredicted RBP5.35□□□□□ -1.55
VAPA-207ENST00000583879 RAB6CQ9H0N0 254 aa5.35□□□□□ -1.55
VAPA-207ENST00000583879 TMEM168Q9H0V1 697 aa5.35□□□□□ -1.55
VAPA-207ENST00000583879 SIX2Q9NPC8 291 aa5.35□□□□□ -1.55
VAPA-207ENST00000583879 PCDH12Q9NPG4 1184 aa5.35□□□□□ -1.55
VAPA-207ENST00000583879 SPATS2LQ9NUQ6 558 aaKnown RBP5.35□□□□□ -1.55
VAPA-207ENST00000583879 AJAP1Q9UKB5 411 aaPredicted RBP5.35□□□□□ -1.55
VAPA-207ENST00000583879 CTNND2Q9UQB3 1225 aa5.35□□□□□ -1.55
VAPA-207ENST00000583879 MAN2B2Q9Y2E5 1009 aa5.35□□□□□ -1.55
VAPA-207ENST00000583879 MAST4O15021 2626 aa5.35□□□□□ -1.55
VAPA-207ENST00000583879 DOCK9Q9BZ29 2069 aa5.35□□□□□ -1.55
VAPA-207ENST00000583879 TP53BP1Q12888 1972 aaPredicted RBP5.35□□□□□ -1.55
VAPA-207ENST00000583879 IGHV5-10-1A0A0J9YXX1 117 aa5.34□□□□□ -1.55
VAPA-207ENST00000583879 FAM170AA1A519 330 aa5.34□□□□□ -1.55
VAPA-207ENST00000583879 TSPAN11A1L157 253 aa5.34□□□□□ -1.55
VAPA-207ENST00000583879 RHPN2P1A8MT19 583 aa5.34□□□□□ -1.55
VAPA-207ENST00000583879 ZNF891A8MT65 544 aaPredicted RBP5.34□□□□□ -1.55
VAPA-207ENST00000583879 B4DGG1 531 aa5.34□□□□□ -1.55
VAPA-207ENST00000583879 PDE2AO00408 941 aaPredicted RBP5.34□□□□□ -1.55
VAPA-207ENST00000583879 BIN1O00499 593 aa5.34□□□□□ -1.55
VAPA-207ENST00000583879 NKX2-8O15522 239 aa5.34□□□□□ -1.55
VAPA-207ENST00000583879 BUB1BO60566 1050 aaPredicted RBP5.34□□□□□ -1.55
VAPA-207ENST00000583879 RECQL5O94762 991 aaPredicted RBP5.34□□□□□ -1.55
VAPA-207ENST00000583879 PIGNO95427 931 aa5.34□□□□□ -1.55
VAPA-207ENST00000583879 LSM8O95777 96 aaKnown RBP5.34□□□□□ -1.55
VAPA-207ENST00000583879 PCCBP05166 539 aa5.34□□□□□ -1.55
VAPA-207ENST00000583879 PNMA6AP0CW24 399 aaPredicted RBP5.34□□□□□ -1.55
VAPA-207ENST00000583879 CCNB1P14635 433 aa5.34□□□□□ -1.55
VAPA-207ENST00000583879 LIFP15018 202 aa5.34□□□□□ -1.55
VAPA-207ENST00000583879 KELP23276 732 aa5.34□□□□□ -1.55
VAPA-207ENST00000583879 CALRP27797 417 aaKnown RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms