RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 UNC13CQ8NB66 2214 aa20.92■□□□□ 0.94
CCDC42-203ENST00000581598 CCDC187A0A096LP49 1063 aa20.91■□□□□ 0.94
CCDC42-203ENST00000581598 PRSS38A1L453 326 aa20.91■□□□□ 0.94
CCDC42-203ENST00000581598 NPIPB15A6NHN6 443 aaPredicted RBP20.91■□□□□ 0.94
CCDC42-203ENST00000581598 TMX2-CTNND1H3BSU7 103 aa20.91■□□□□ 0.94
CCDC42-203ENST00000581598 H2AFZP0C0S5 128 aa20.91■□□□□ 0.94
CCDC42-203ENST00000581598 KRT10P13645 584 aa20.91■□□□□ 0.94
CCDC42-203ENST00000581598 RBMS1P29558 406 aaKnown RBP20.91■□□□□ 0.94
CCDC42-203ENST00000581598 IFI16Q16666 785 aaKnown RBP20.91■□□□□ 0.94
CCDC42-203ENST00000581598 H2AFVQ71UI9 128 aa20.91■□□□□ 0.94
CCDC42-203ENST00000581598 TAF8Q7Z7C8 310 aa20.91■□□□□ 0.94
CCDC42-203ENST00000581598 FAF2Q96CS3 445 aa20.91■□□□□ 0.94
CCDC42-203ENST00000581598 FCRL3Q96P31 734 aaPredicted RBP20.91■□□□□ 0.94
CCDC42-203ENST00000581598 DPH1Q9BZG8 443 aa20.91■□□□□ 0.94
CCDC42-203ENST00000581598 POLR1EQ9GZS1 481 aaKnown RBP20.91■□□□□ 0.94
CCDC42-203ENST00000581598 TMEM168Q9H0V1 697 aa20.91■□□□□ 0.94
CCDC42-203ENST00000581598 CYP4F12Q9HCS2 524 aa20.91■□□□□ 0.94
CCDC42-203ENST00000581598 NT5MQ9NPB1 228 aa20.91■□□□□ 0.94
CCDC42-203ENST00000581598 CTTNBP2NLQ9P2B4 639 aa20.91■□□□□ 0.94
CCDC42-203ENST00000581598 CDRT15L2A8MXV6 281 aa20.9■□□□□ 0.94
CCDC42-203ENST00000581598 MATN3O15232 486 aa20.9■□□□□ 0.94
CCDC42-203ENST00000581598 CASC3O15234 703 aaKnown RBP20.9■□□□□ 0.94
CCDC42-203ENST00000581598 NOBOXO60393 691 aa20.9■□□□□ 0.94
CCDC42-203ENST00000581598 KRT7P08729 469 aa20.9■□□□□ 0.94
CCDC42-203ENST00000581598 GLB1P16278 677 aa20.9■□□□□ 0.94
CCDC42-203ENST00000581598 CCNCP24863 283 aa20.9■□□□□ 0.94
CCDC42-203ENST00000581598 MAN1A1P33908 653 aa20.9■□□□□ 0.94
CCDC42-203ENST00000581598 SSR1P43307 286 aaKnown RBP20.9■□□□□ 0.94
CCDC42-203ENST00000581598 UCNP55089 124 aa20.9■□□□□ 0.94
CCDC42-203ENST00000581598 DPTQ07507 201 aa20.9■□□□□ 0.94
CCDC42-203ENST00000581598 EIF3IQ13347 325 aaKnown RBP20.9■□□□□ 0.94
CCDC42-203ENST00000581598 ARHGEF7Q14155 803 aa20.9■□□□□ 0.94
CCDC42-203ENST00000581598 ATP13A4Q4VNC1 1196 aa20.9■□□□□ 0.94
CCDC42-203ENST00000581598 ANKRD20A8PQ5CZ79 823 aa20.9■□□□□ 0.94
CCDC42-203ENST00000581598 CERCAMQ5T4B2 595 aa20.9■□□□□ 0.94
CCDC42-203ENST00000581598 HSD11B1LQ7Z5J1 315 aa20.9■□□□□ 0.94
CCDC42-203ENST00000581598 TECPR1Q7Z6L1 1165 aa20.9■□□□□ 0.94
CCDC42-203ENST00000581598 MAP7D3Q8IWC1 876 aa20.9■□□□□ 0.94
CCDC42-203ENST00000581598 NDUFAF2Q8N183 169 aa20.9■□□□□ 0.94
CCDC42-203ENST00000581598 KCTD6Q8NC69 237 aa20.9■□□□□ 0.94
CCDC42-203ENST00000581598 LSM14AQ8ND56 463 aaKnown RBP20.9■□□□□ 0.94
CCDC42-203ENST00000581598 GPBAR1Q8TDU6 330 aa20.9■□□□□ 0.94
CCDC42-203ENST00000581598 CTNNBL1Q8WYA6 563 aaPredicted RBP20.9■□□□□ 0.94
CCDC42-203ENST00000581598 SEMA3CQ99985 751 aa20.9■□□□□ 0.94
CCDC42-203ENST00000581598 FRMD8Q9BZ67 464 aaPredicted RBP20.9■□□□□ 0.94
CCDC42-203ENST00000581598 HAUS2Q9NVX0 235 aa20.9■□□□□ 0.94
CCDC42-203ENST00000581598 SSUH2Q9Y2M2 353 aa20.9■□□□□ 0.94
CCDC42-203ENST00000581598 REXO2Q9Y3B8 237 aaKnown RBP20.9■□□□□ 0.94
CCDC42-203ENST00000581598 TEX51A0A1B0GUA7 166 aa20.89■□□□□ 0.93
CCDC42-203ENST00000581598 A0A1W2PQM1 296 aa20.89■□□□□ 0.93
CCDC42-203ENST00000581598 D6RAR5 112 aa20.89■□□□□ 0.93
CCDC42-203ENST00000581598 TK2O00142 265 aa20.89■□□□□ 0.93
CCDC42-203ENST00000581598 ETV3P41162 512 aa20.89■□□□□ 0.93
CCDC42-203ENST00000581598 CDK3Q00526 305 aa20.89■□□□□ 0.93
CCDC42-203ENST00000581598 HLTFQ14527 1009 aaKnown RBP eCLIP20.89■□□□□ 0.93
CCDC42-203ENST00000581598 TCEA2Q15560 299 aa20.89■□□□□ 0.93
CCDC42-203ENST00000581598 C14orf28Q4W4Y0 310 aa20.89■□□□□ 0.93
CCDC42-203ENST00000581598 BROXQ5VW32 411 aa20.89■□□□□ 0.93
CCDC42-203ENST00000581598 GPR155Q7Z3F1 870 aa20.89■□□□□ 0.93
CCDC42-203ENST00000581598 CLEC14AQ86T13 490 aa20.89■□□□□ 0.93
CCDC42-203ENST00000581598 NLRP8Q86W28 1048 aa20.89■□□□□ 0.93
CCDC42-203ENST00000581598 HEATR4Q86WZ0 1026 aa20.89■□□□□ 0.93
CCDC42-203ENST00000581598 RAVER1Q8IY67 606 aaKnown RBP20.89■□□□□ 0.93
CCDC42-203ENST00000581598 ARL14Q8N4G2 192 aa20.89■□□□□ 0.93
CCDC42-203ENST00000581598 FAM46DQ8NEK8 389 aa20.89■□□□□ 0.93
CCDC42-203ENST00000581598 KCNE4Q8WWG9 221 aa20.89■□□□□ 0.93
CCDC42-203ENST00000581598 CCDC97Q96F63 343 aaPredicted RBP20.89■□□□□ 0.93
CCDC42-203ENST00000581598 GFM1Q96RP9 751 aaKnown RBP20.89■□□□□ 0.93
CCDC42-203ENST00000581598 LRRN3Q9H3W5 708 aa20.89■□□□□ 0.93
CCDC42-203ENST00000581598 TRNAU1APQ9NX07 287 aaKnown RBP20.89■□□□□ 0.93
CCDC42-203ENST00000581598 ADGRG1Q9Y653 693 aa20.89■□□□□ 0.93
CCDC42-203ENST00000581598 BPTFQ12830 3046 aa20.89■□□□□ 0.93
CCDC42-203ENST00000581598 NUDT21O43809 227 aaKnown RBP20.88■□□□□ 0.93
CCDC42-203ENST00000581598 RPLP0P05388 317 aaKnown RBP20.88■□□□□ 0.93
CCDC42-203ENST00000581598 CEACAM5P06731 702 aa20.88■□□□□ 0.93
CCDC42-203ENST00000581598 PDHA1P08559 390 aa20.88■□□□□ 0.93
CCDC42-203ENST00000581598 CCNB1P14635 433 aa20.88■□□□□ 0.93
CCDC42-203ENST00000581598 ZNF30P17039 623 aa20.88■□□□□ 0.93
CCDC42-203ENST00000581598 MX2P20592 715 aa20.88■□□□□ 0.93
CCDC42-203ENST00000581598 CCKBRP32239 447 aa20.88■□□□□ 0.93
CCDC42-203ENST00000581598 TAS2R40P59535 323 aa20.88■□□□□ 0.93
CCDC42-203ENST00000581598 CCL7P80098 99 aa20.88■□□□□ 0.93
CCDC42-203ENST00000581598 Q6ZVL8 140 aa20.88■□□□□ 0.93
CCDC42-203ENST00000581598 TSPAN33Q86UF1 283 aa20.88■□□□□ 0.93
CCDC42-203ENST00000581598 C17orf82Q86X59 251 aaPredicted RBP20.88■□□□□ 0.93
CCDC42-203ENST00000581598 CPNE8Q86YQ8 564 aa20.88■□□□□ 0.93
CCDC42-203ENST00000581598 KIAA1524Q8TCG1 905 aa20.88■□□□□ 0.93
CCDC42-203ENST00000581598 TMEM74Q96NL1 305 aa20.88■□□□□ 0.93
CCDC42-203ENST00000581598 DNPEPQ9ULA0 475 aa20.88■□□□□ 0.93
CCDC42-203ENST00000581598 SCN8AQ9UQD0 1980 aa20.88■□□□□ 0.93
CCDC42-203ENST00000581598 A0A0J9YYE9 177 aa20.87■□□□□ 0.93
CCDC42-203ENST00000581598 ZNF487B1APH4 448 aa20.87■□□□□ 0.93
CCDC42-203ENST00000581598 ATXN7O15265 892 aaPredicted RBP20.87■□□□□ 0.93
CCDC42-203ENST00000581598 TRBC1P01850 177 aa20.87■□□□□ 0.93
CCDC42-203ENST00000581598 ITGA2BP08514 1039 aa20.87■□□□□ 0.93
CCDC42-203ENST00000581598 TMEM253P0C7T8 217 aa20.87■□□□□ 0.93
CCDC42-203ENST00000581598 TMPRSS3P57727 454 aa20.87■□□□□ 0.93
CCDC42-203ENST00000581598 RPL26P61254 145 aaKnown RBP20.87■□□□□ 0.93
CCDC42-203ENST00000581598 SPA17Q15506 151 aa20.87■□□□□ 0.93
CCDC42-203ENST00000581598 DENND2CQ68D51 928 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms