RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 STYXQ8WUJ0 223 aa11.27□□□□□ -0.61
CDK5RAP3-210ENST00000578733 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.27□□□□□ -0.61
CDK5RAP3-210ENST00000578733 SNX19Q92543 992 aa11.27□□□□□ -0.61
CDK5RAP3-210ENST00000578733 NUS1Q96E22 293 aa11.27□□□□□ -0.61
CDK5RAP3-210ENST00000578733 SLC17A9Q9BYT1 436 aa11.27□□□□□ -0.61
CDK5RAP3-210ENST00000578733 DUSP15Q9H1R2 295 aaPredicted RBP11.27□□□□□ -0.61
CDK5RAP3-210ENST00000578733 PIH1D1Q9NWS0 290 aaKnown RBP11.27□□□□□ -0.61
CDK5RAP3-210ENST00000578733 DMGDHQ9UI17 866 aaKnown RBP11.27□□□□□ -0.61
CDK5RAP3-210ENST00000578733 GGT7Q9UJ14 662 aa11.27□□□□□ -0.61
CDK5RAP3-210ENST00000578733 APPL1Q9UKG1 709 aa11.27□□□□□ -0.61
CDK5RAP3-210ENST00000578733 RIMKLBQ9ULI2 386 aa11.27□□□□□ -0.61
CDK5RAP3-210ENST00000578733 TCAF1Q9Y4C2 921 aa11.27□□□□□ -0.61
CDK5RAP3-210ENST00000578733 MAD1L1Q9Y6D9 718 aa11.27□□□□□ -0.61
CDK5RAP3-210ENST00000578733 ESYT3A0FGR9 886 aa11.26□□□□□ -0.61
CDK5RAP3-210ENST00000578733 MED19A0JLT2 244 aaPredicted RBP11.26□□□□□ -0.61
CDK5RAP3-210ENST00000578733 IGLON5A6NGN9 336 aa11.26□□□□□ -0.61
CDK5RAP3-210ENST00000578733 METTL12A8MUP2 240 aa11.26□□□□□ -0.61
CDK5RAP3-210ENST00000578733 TP73O15350 636 aa11.26□□□□□ -0.61
CDK5RAP3-210ENST00000578733 POLBP06746 335 aa11.26□□□□□ -0.61
CDK5RAP3-210ENST00000578733 HNRNPA2B1P22626 353 aaKnown RBP11.26□□□□□ -0.61
CDK5RAP3-210ENST00000578733 LHCGRP22888 699 aa11.26□□□□□ -0.61
CDK5RAP3-210ENST00000578733 MGAT1P26572 445 aa11.26□□□□□ -0.61
CDK5RAP3-210ENST00000578733 MAT2AP31153 395 aaKnown RBP11.26□□□□□ -0.61
CDK5RAP3-210ENST00000578733 SPAM1P38567 509 aa11.26□□□□□ -0.61
CDK5RAP3-210ENST00000578733 GRIA1P42261 906 aa11.26□□□□□ -0.61
CDK5RAP3-210ENST00000578733 STC1P52823 247 aa11.26□□□□□ -0.61
CDK5RAP3-210ENST00000578733 SEMG2Q02383 582 aa11.26□□□□□ -0.61
CDK5RAP3-210ENST00000578733 PTSQ03393 145 aa11.26□□□□□ -0.61
CDK5RAP3-210ENST00000578733 SIM2Q14190 667 aaPredicted RBP11.26□□□□□ -0.61
CDK5RAP3-210ENST00000578733 AGERQ15109 404 aa11.26□□□□□ -0.61
CDK5RAP3-210ENST00000578733 BBS9Q3SYG4 887 aa11.26□□□□□ -0.61
CDK5RAP3-210ENST00000578733 TMEM259Q4ZIN3 620 aa11.26□□□□□ -0.61
CDK5RAP3-210ENST00000578733 CERCAMQ5T4B2 595 aa11.26□□□□□ -0.61
CDK5RAP3-210ENST00000578733 ZNF534Q76KX8 674 aa11.26□□□□□ -0.61
CDK5RAP3-210ENST00000578733 ZNF765Q7L2R6 523 aa11.26□□□□□ -0.61
CDK5RAP3-210ENST00000578733 TSPAN33Q86UF1 283 aa11.26□□□□□ -0.61
CDK5RAP3-210ENST00000578733 CAND1Q86VP6 1230 aaKnown RBP11.26□□□□□ -0.61
CDK5RAP3-210ENST00000578733 RGL4Q8IZJ4 473 aa11.26□□□□□ -0.61
CDK5RAP3-210ENST00000578733 CBARPQ8N350 705 aaPredicted RBP11.26□□□□□ -0.61
CDK5RAP3-210ENST00000578733 FAM160A2Q8N612 972 aaPredicted RBP11.26□□□□□ -0.61
CDK5RAP3-210ENST00000578733 SKA1Q96BD8 255 aa11.26□□□□□ -0.61
CDK5RAP3-210ENST00000578733 DTD2Q96FN9 168 aa11.26□□□□□ -0.61
CDK5RAP3-210ENST00000578733 PLEKHG4BQ96PX9 1271 aa11.26□□□□□ -0.61
CDK5RAP3-210ENST00000578733 FMO2Q99518 471 aa11.26□□□□□ -0.61
CDK5RAP3-210ENST00000578733 FAM83DQ9H4H8 585 aa11.26□□□□□ -0.61
CDK5RAP3-210ENST00000578733 C6orf106Q9H6K1 298 aaPredicted RBP11.26□□□□□ -0.61
CDK5RAP3-210ENST00000578733 GDF3Q9NR23 364 aa11.26□□□□□ -0.61
CDK5RAP3-210ENST00000578733 GRHL1Q9NZI5 618 aa11.26□□□□□ -0.61
CDK5RAP3-210ENST00000578733 MBD1Q9UIS9 605 aaPredicted RBP11.26□□□□□ -0.61
CDK5RAP3-210ENST00000578733 INVSQ9Y283 1065 aa11.26□□□□□ -0.61
CDK5RAP3-210ENST00000578733 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.26□□□□□ -0.61
CDK5RAP3-210ENST00000578733 SPO11Q9Y5K1 396 aa11.26□□□□□ -0.61
CDK5RAP3-210ENST00000578733 FRYLO94915 3013 aa11.26□□□□□ -0.61
CDK5RAP3-210ENST00000578733 PIKFYVEQ9Y2I7 2098 aa11.26□□□□□ -0.61
CDK5RAP3-210ENST00000578733 CACNA1BQ00975 2339 aa11.25□□□□□ -0.61
CDK5RAP3-210ENST00000578733 FAM237BA0A1B0GVD1 139 aa11.25□□□□□ -0.61
CDK5RAP3-210ENST00000578733 A0A1W2PPC4 97 aa11.25□□□□□ -0.61
CDK5RAP3-210ENST00000578733 PRAMEF26H0Y7S4 382 aa11.25□□□□□ -0.61
CDK5RAP3-210ENST00000578733 TOR1BO14657 336 aa11.25□□□□□ -0.61
CDK5RAP3-210ENST00000578733 FPGTO14772 594 aa11.25□□□□□ -0.61
CDK5RAP3-210ENST00000578733 SPINT1O43278 529 aa11.25□□□□□ -0.61
CDK5RAP3-210ENST00000578733 LATO43561 262 aa11.25□□□□□ -0.61
CDK5RAP3-210ENST00000578733 RECQL5O94762 991 aaPredicted RBP11.25□□□□□ -0.61
CDK5RAP3-210ENST00000578733 TTC4O95801 387 aa11.25□□□□□ -0.61
CDK5RAP3-210ENST00000578733 C1SP09871 688 aa11.25□□□□□ -0.61
CDK5RAP3-210ENST00000578733 GNSP15586 552 aa11.25□□□□□ -0.61
CDK5RAP3-210ENST00000578733 TSHRP16473 764 aa11.25□□□□□ -0.61
CDK5RAP3-210ENST00000578733 PGAM1P18669 254 aa11.25□□□□□ -0.61
CDK5RAP3-210ENST00000578733 CD27P26842 260 aa11.25□□□□□ -0.61
CDK5RAP3-210ENST00000578733 ETV3P41162 512 aa11.25□□□□□ -0.61
CDK5RAP3-210ENST00000578733 MAGEA3P43357 314 aa11.25□□□□□ -0.61
CDK5RAP3-210ENST00000578733 SPINT3P49223 89 aa11.25□□□□□ -0.61
CDK5RAP3-210ENST00000578733 DHPSP49366 369 aaPredicted RBP11.25□□□□□ -0.61
CDK5RAP3-210ENST00000578733 DCDC1P59894 354 aa11.25□□□□□ -0.61
CDK5RAP3-210ENST00000578733 PPP2CBP62714 309 aa11.25□□□□□ -0.61
CDK5RAP3-210ENST00000578733 PPP2CAP67775 309 aa11.25□□□□□ -0.61
CDK5RAP3-210ENST00000578733 PRAMEP78395 509 aa11.25□□□□□ -0.61
CDK5RAP3-210ENST00000578733 CREB5Q02930 508 aa11.25□□□□□ -0.61
CDK5RAP3-210ENST00000578733 DHX9Q08211 1270 aaKnown RBP11.25□□□□□ -0.61
CDK5RAP3-210ENST00000578733 PDIA2Q13087 525 aaKnown RBP11.25□□□□□ -0.61
CDK5RAP3-210ENST00000578733 ITGA9Q13797 1035 aa11.25□□□□□ -0.61
CDK5RAP3-210ENST00000578733 STAT4Q14765 748 aa11.25□□□□□ -0.61
CDK5RAP3-210ENST00000578733 LRRC14Q15048 493 aa11.25□□□□□ -0.61
CDK5RAP3-210ENST00000578733 CDKN3Q16667 212 aa11.25□□□□□ -0.61
CDK5RAP3-210ENST00000578733 KCTD19Q17RG1 926 aaPredicted RBP11.25□□□□□ -0.61
CDK5RAP3-210ENST00000578733 TSTD2Q5T7W7 516 aa11.25□□□□□ -0.61
CDK5RAP3-210ENST00000578733 LYSMD4Q5XG99 296 aa11.25□□□□□ -0.61
CDK5RAP3-210ENST00000578733 SEL1L3Q68CR1 1132 aa11.25□□□□□ -0.61
CDK5RAP3-210ENST00000578733 PMS2CLQ68D20 193 aa11.25□□□□□ -0.61
CDK5RAP3-210ENST00000578733 PDPK2PQ6A1A2 396 aa11.25□□□□□ -0.61
CDK5RAP3-210ENST00000578733 PRR23BQ6ZRT6 265 aa11.25□□□□□ -0.61
CDK5RAP3-210ENST00000578733 RABEPKQ7Z6M1 372 aa11.25□□□□□ -0.61
CDK5RAP3-210ENST00000578733 NLRP8Q86W28 1048 aa11.25□□□□□ -0.61
CDK5RAP3-210ENST00000578733 TTC30BQ8N4P2 665 aa11.25□□□□□ -0.61
CDK5RAP3-210ENST00000578733 FBXO25Q8TCJ0 367 aa11.25□□□□□ -0.61
CDK5RAP3-210ENST00000578733 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.25□□□□□ -0.61
CDK5RAP3-210ENST00000578733 AP2M1Q96CW1 435 aa11.25□□□□□ -0.61
CDK5RAP3-210ENST00000578733 STAMBPL1Q96FJ0 436 aa11.25□□□□□ -0.61
CDK5RAP3-210ENST00000578733 COQ10AQ96MF6 247 aa11.25□□□□□ -0.61
CDK5RAP3-210ENST00000578733 HSPA12BQ96MM6 686 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms