RNA–Protein interactions for RNA: ENST00000576958.1

PRPF8-215, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-215ENST00000576958 NAGSQ8N159 534 aa12.02□□□□□ -0.49
PRPF8-215ENST00000576958 CBARPQ8N350 705 aaPredicted RBP12.02□□□□□ -0.49
PRPF8-215ENST00000576958 WDR48Q8TAF3 677 aa12.02□□□□□ -0.49
PRPF8-215ENST00000576958 GPBAR1Q8TDU6 330 aa12.02□□□□□ -0.49
PRPF8-215ENST00000576958 ZDHHC1Q8WTX9 485 aa12.02□□□□□ -0.49
PRPF8-215ENST00000576958 SCAMP4Q969E2 229 aa12.02□□□□□ -0.49
PRPF8-215ENST00000576958 ZNF653Q96CK0 615 aa12.02□□□□□ -0.49
PRPF8-215ENST00000576958 SGF29Q96ES7 293 aa12.02□□□□□ -0.49
PRPF8-215ENST00000576958 CCDC97Q96F63 343 aaPredicted RBP12.02□□□□□ -0.49
PRPF8-215ENST00000576958 NAP1L5Q96NT1 182 aaPredicted RBP12.02□□□□□ -0.49
PRPF8-215ENST00000576958 PSKH2Q96QS6 385 aa12.02□□□□□ -0.49
PRPF8-215ENST00000576958 STRADBQ9C0K7 418 aa12.02□□□□□ -0.49
PRPF8-215ENST00000576958 FLNCQ14315 2725 aa12.02□□□□□ -0.49
PRPF8-215ENST00000576958 LRRC10BA6NIK2 292 aa12.01□□□□□ -0.49
PRPF8-215ENST00000576958 NVLO15381 856 aaKnown RBP12.01□□□□□ -0.49
PRPF8-215ENST00000576958 MAFKO60675 156 aa12.01□□□□□ -0.49
PRPF8-215ENST00000576958 TPM2P07951 284 aa12.01□□□□□ -0.49
PRPF8-215ENST00000576958 CDK11BP21127 795 aaKnown RBP12.01□□□□□ -0.49
PRPF8-215ENST00000576958 VIPR1P32241 457 aa12.01□□□□□ -0.49
PRPF8-215ENST00000576958 ADCY8P40145 1251 aa12.01□□□□□ -0.49
PRPF8-215ENST00000576958 AIF1P55008 147 aa12.01□□□□□ -0.49
PRPF8-215ENST00000576958 ASIC2Q16515 512 aa12.01□□□□□ -0.49
PRPF8-215ENST00000576958 STX1AQ16623 288 aa12.01□□□□□ -0.49
PRPF8-215ENST00000576958 TMCO4Q5TGY1 634 aa12.01□□□□□ -0.49
PRPF8-215ENST00000576958 POLNQ7Z5Q5 900 aa12.01□□□□□ -0.49
PRPF8-215ENST00000576958 DTD2Q96FN9 168 aa12.01□□□□□ -0.49
PRPF8-215ENST00000576958 TMEM74Q96NL1 305 aa12.01□□□□□ -0.49
PRPF8-215ENST00000576958 CSPG4P5Q96PW8 444 aa12.01□□□□□ -0.49
PRPF8-215ENST00000576958 FUCA2Q9BTY2 467 aa12.01□□□□□ -0.49
PRPF8-215ENST00000576958 TEX101Q9BY14 249 aa12.01□□□□□ -0.49
PRPF8-215ENST00000576958 PARVAQ9NVD7 372 aa12.01□□□□□ -0.49
PRPF8-215ENST00000576958 OCIAD1Q9NX40 245 aa12.01□□□□□ -0.49
PRPF8-215ENST00000576958 SEPT3Q9UH03 358 aa12.01□□□□□ -0.49
PRPF8-215ENST00000576958 ACSL6Q9UKU0 697 aa12.01□□□□□ -0.49
PRPF8-215ENST00000576958 TNFRSF10CO14798 259 aa12□□□□□ -0.49
PRPF8-215ENST00000576958 INPP4BO15327 924 aa12□□□□□ -0.49
PRPF8-215ENST00000576958 NUDT21O43809 227 aaKnown RBP12□□□□□ -0.49
PRPF8-215ENST00000576958 PRPSAP2O60256 369 aa12□□□□□ -0.49
PRPF8-215ENST00000576958 WISP1O95388 367 aa12□□□□□ -0.49
PRPF8-215ENST00000576958 RARAP10276 462 aa12□□□□□ -0.49
PRPF8-215ENST00000576958 AP1S1P61966 158 aa12□□□□□ -0.49
PRPF8-215ENST00000576958 NSUN2Q08J23 767 aaKnown RBP eCLIP12□□□□□ -0.49
PRPF8-215ENST00000576958 EIF3IQ13347 325 aaKnown RBP12□□□□□ -0.49
PRPF8-215ENST00000576958 ZNF235Q14590 738 aa12□□□□□ -0.49
PRPF8-215ENST00000576958 GRM3Q14832 879 aa12□□□□□ -0.49
PRPF8-215ENST00000576958 ATP13A4Q4VNC1 1196 aa12□□□□□ -0.49
PRPF8-215ENST00000576958 MANEAQ5SRI9 462 aa12□□□□□ -0.49
PRPF8-215ENST00000576958 RAET1GQ6H3X3 334 aa12□□□□□ -0.49
PRPF8-215ENST00000576958 SASS6Q6UVJ0 657 aa12□□□□□ -0.49
PRPF8-215ENST00000576958 CLEC17AQ6ZS10 378 aa12□□□□□ -0.49
PRPF8-215ENST00000576958 ZNF438Q7Z4V0 828 aa12□□□□□ -0.49
PRPF8-215ENST00000576958 TECPR1Q7Z6L1 1165 aa12□□□□□ -0.49
PRPF8-215ENST00000576958 PIH1D2Q8WWB5 315 aa12□□□□□ -0.49
PRPF8-215ENST00000576958 NUDCD1Q96RS6 583 aa12□□□□□ -0.49
PRPF8-215ENST00000576958 CTRCQ99895 268 aa12□□□□□ -0.49
PRPF8-215ENST00000576958 MGME1Q9BQP7 344 aa12□□□□□ -0.49
PRPF8-215ENST00000576958 BRD8Q9H0E9 1235 aa12□□□□□ -0.49
PRPF8-215ENST00000576958 ABCG8Q9H221 673 aa12□□□□□ -0.49
PRPF8-215ENST00000576958 CLMPQ9H6B4 373 aa12□□□□□ -0.49
PRPF8-215ENST00000576958 PCDH18Q9HCL0 1135 aa12□□□□□ -0.49
PRPF8-215ENST00000576958 ARFGAP3Q9NP61 516 aa12□□□□□ -0.49
PRPF8-215ENST00000576958 NT5MQ9NPB1 228 aa12□□□□□ -0.49
PRPF8-215ENST00000576958 RTN4Q9NQC3 1192 aaKnown RBP12□□□□□ -0.49
PRPF8-215ENST00000576958 STAU2Q9NUL3 570 aaKnown RBP eCLIP12□□□□□ -0.49
PRPF8-215ENST00000576958 TMEM63CQ9P1W3 806 aa12□□□□□ -0.49
PRPF8-215ENST00000576958 B3GALT1Q9Y5Z6 326 aa12□□□□□ -0.49
PRPF8-215ENST00000576958 OAS3Q9Y6K5 1087 aaKnown RBP12□□□□□ -0.49
PRPF8-215ENST00000576958 SPTA1P02549 2419 aa12□□□□□ -0.49
PRPF8-215ENST00000576958 PTPN13Q12923 2485 aa12□□□□□ -0.49
PRPF8-215ENST00000576958 NAV2Q8IVL1 2488 aa11.99□□□□□ -0.49
PRPF8-215ENST00000576958 CFAP69A5D8W1 941 aa11.99□□□□□ -0.49
PRPF8-215ENST00000576958 RHPN2P1A8MT19 583 aa11.99□□□□□ -0.49
PRPF8-215ENST00000576958 A8MU76 341 aa11.99□□□□□ -0.49
PRPF8-215ENST00000576958 MFSD11O43934 449 aa11.99□□□□□ -0.49
PRPF8-215ENST00000576958 PGLSO95336 258 aa11.99□□□□□ -0.49
PRPF8-215ENST00000576958 ATP1A1P05023 1023 aaKnown RBP11.99□□□□□ -0.49
PRPF8-215ENST00000576958 HOXC4P09017 264 aaPredicted RBP11.99□□□□□ -0.49
PRPF8-215ENST00000576958 LIFP15018 202 aa11.99□□□□□ -0.49
PRPF8-215ENST00000576958 IL4RP24394 825 aa11.99□□□□□ -0.49
PRPF8-215ENST00000576958 HTR7P34969 479 aa11.99□□□□□ -0.49
PRPF8-215ENST00000576958 MLLT3P42568 568 aaPredicted RBP11.99□□□□□ -0.49
PRPF8-215ENST00000576958 DSC2Q02487 901 aa11.99□□□□□ -0.49
PRPF8-215ENST00000576958 SLC25A11Q02978 314 aaKnown RBP11.99□□□□□ -0.49
PRPF8-215ENST00000576958 PTSQ03393 145 aa11.99□□□□□ -0.49
PRPF8-215ENST00000576958 TYRO3Q06418 890 aa11.99□□□□□ -0.49
PRPF8-215ENST00000576958 DPYSL2Q16555 572 aa11.99□□□□□ -0.49
PRPF8-215ENST00000576958 ANO6Q4KMQ2 910 aa11.99□□□□□ -0.49
PRPF8-215ENST00000576958 SNAP47Q5SQN1 464 aa11.99□□□□□ -0.49
PRPF8-215ENST00000576958 ZNF648Q5T619 568 aaPredicted RBP11.99□□□□□ -0.49
PRPF8-215ENST00000576958 ATP1A1-AS1Q5TC04 95 aa11.99□□□□□ -0.49
PRPF8-215ENST00000576958 LRRC66Q68CR7 880 aa11.99□□□□□ -0.49
PRPF8-215ENST00000576958 PIM3Q86V86 326 aa11.99□□□□□ -0.49
PRPF8-215ENST00000576958 PTRH1Q86Y79 214 aaKnown RBP11.99□□□□□ -0.49
PRPF8-215ENST00000576958 UNC5BQ8IZJ1 945 aa11.99□□□□□ -0.49
PRPF8-215ENST00000576958 ATL2Q8NHH9 583 aa11.99□□□□□ -0.49
PRPF8-215ENST00000576958 ART4Q93070 314 aa11.99□□□□□ -0.49
PRPF8-215ENST00000576958 NKD1Q969G9 470 aa11.99□□□□□ -0.49
PRPF8-215ENST00000576958 WDR24Q96S15 920 aa11.99□□□□□ -0.49
PRPF8-215ENST00000576958 STARD5Q9NSY2 213 aa11.99□□□□□ -0.49
PRPF8-215ENST00000576958 ANO10Q9NW15 660 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms