RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 HYAL3O43820 417 aaPredicted RBP13.25□□□□□ -0.29
RPAIN-216ENST00000575599 PMPCBO75439 489 aa13.25□□□□□ -0.29
RPAIN-216ENST00000575599 LDOC1O95751 146 aaPredicted RBP13.25□□□□□ -0.29
RPAIN-216ENST00000575599 TOP3BO95985 862 aaKnown RBP13.25□□□□□ -0.29
RPAIN-216ENST00000575599 MT-CYBP00156 380 aaPredicted RBP13.25□□□□□ -0.29
RPAIN-216ENST00000575599 C1SP09871 688 aa13.25□□□□□ -0.29
RPAIN-216ENST00000575599 TCP1P17987 556 aaKnown RBP13.25□□□□□ -0.29
RPAIN-216ENST00000575599 NFKB1P19838 968 aa13.25□□□□□ -0.29
RPAIN-216ENST00000575599 SPINK2P20155 84 aa13.25□□□□□ -0.29
RPAIN-216ENST00000575599 RBL1P28749 1068 aa13.25□□□□□ -0.29
RPAIN-216ENST00000575599 CD68P34810 354 aaPredicted RBP13.25□□□□□ -0.29
RPAIN-216ENST00000575599 EIF3EP60228 445 aaKnown RBP13.25□□□□□ -0.29
RPAIN-216ENST00000575599 RPL26P61254 145 aaKnown RBP13.25□□□□□ -0.29
RPAIN-216ENST00000575599 PPARDQ03181 441 aa13.25□□□□□ -0.29
RPAIN-216ENST00000575599 DNAJC3Q13217 504 aa13.25□□□□□ -0.29
RPAIN-216ENST00000575599 XRCC4Q13426 336 aa13.25□□□□□ -0.29
RPAIN-216ENST00000575599 NFATC4Q14934 902 aa13.25□□□□□ -0.29
RPAIN-216ENST00000575599 TCEA2Q15560 299 aa13.25□□□□□ -0.29
RPAIN-216ENST00000575599 QPCTQ16769 361 aa13.25□□□□□ -0.29
RPAIN-216ENST00000575599 FAXCQ5TGI0 409 aa13.25□□□□□ -0.29
RPAIN-216ENST00000575599 ESRP1Q6NXG1 681 aaKnown RBP13.25□□□□□ -0.29
RPAIN-216ENST00000575599 CRTC1Q6UUV9 634 aa13.25□□□□□ -0.29
RPAIN-216ENST00000575599 ENPP7Q6UWV6 458 aa13.25□□□□□ -0.29
RPAIN-216ENST00000575599 Q6ZVL8 140 aa13.25□□□□□ -0.29
RPAIN-216ENST00000575599 PID1Q7Z2X4 250 aa13.25□□□□□ -0.29
RPAIN-216ENST00000575599 RD3Q7Z3Z2 195 aa13.25□□□□□ -0.29
RPAIN-216ENST00000575599 SLCO6A1Q86UG4 719 aa13.25□□□□□ -0.29
RPAIN-216ENST00000575599 CDKL3Q8IVW4 592 aaPredicted RBP13.25□□□□□ -0.29
RPAIN-216ENST00000575599 ZNF567Q8N184 647 aa13.25□□□□□ -0.29
RPAIN-216ENST00000575599 PELI3Q8N2H9 469 aa13.25□□□□□ -0.29
RPAIN-216ENST00000575599 LMX1AQ8TE12 382 aa13.25□□□□□ -0.29
RPAIN-216ENST00000575599 HES6Q96HZ4 224 aa13.25□□□□□ -0.29
RPAIN-216ENST00000575599 WDR26Q9H7D7 661 aa13.25□□□□□ -0.29
RPAIN-216ENST00000575599 UBP1Q9NZI7 540 aa13.25□□□□□ -0.29
RPAIN-216ENST00000575599 APOBEC3BQ9UH17 382 aaKnown RBP13.25□□□□□ -0.29
RPAIN-216ENST00000575599 CD84Q9UIB8 345 aa13.25□□□□□ -0.29
RPAIN-216ENST00000575599 ANGPTL2Q9UKU9 493 aa13.25□□□□□ -0.29
RPAIN-216ENST00000575599 PNMA8BQ9ULN7 279 aaPredicted RBP13.25□□□□□ -0.29
RPAIN-216ENST00000575599 RPL26L1Q9UNX3 145 aaKnown RBP13.25□□□□□ -0.29
RPAIN-216ENST00000575599 SPEGQ15772 3267 aa13.25□□□□□ -0.29
RPAIN-216ENST00000575599 COL5A1P20908 1838 aaPredicted RBP13.25□□□□□ -0.29
RPAIN-216ENST00000575599 NCOR2Q9Y618 2525 aa13.25□□□□□ -0.29
RPAIN-216ENST00000575599 C1orf232A0A0U1RR37 186 aa13.24□□□□□ -0.29
RPAIN-216ENST00000575599 ANKRD66B4E2M5 251 aa13.24□□□□□ -0.29
RPAIN-216ENST00000575599 TRIM38O00635 465 aa13.24□□□□□ -0.29
RPAIN-216ENST00000575599 SCAMP1O15126 338 aa13.24□□□□□ -0.29
RPAIN-216ENST00000575599 SIGLEC6O43699 453 aa13.24□□□□□ -0.29
RPAIN-216ENST00000575599 CLDN7O95471 211 aa13.24□□□□□ -0.29
RPAIN-216ENST00000575599 SLC4A1P02730 911 aa13.24□□□□□ -0.29
RPAIN-216ENST00000575599 ZNF30P17039 623 aa13.24□□□□□ -0.29
RPAIN-216ENST00000575599 LSM11P83369 360 aaKnown RBP eCLIP13.24□□□□□ -0.29
RPAIN-216ENST00000575599 TUBB2AQ13885 445 aa13.24□□□□□ -0.29
RPAIN-216ENST00000575599 PRRT3Q5FWE3 981 aa13.24□□□□□ -0.29
RPAIN-216ENST00000575599 SEL1L2Q5TEA6 688 aa13.24□□□□□ -0.29
RPAIN-216ENST00000575599 RAET1GQ6H3X3 334 aa13.24□□□□□ -0.29
RPAIN-216ENST00000575599 PNCKQ6P2M8 343 aa13.24□□□□□ -0.29
RPAIN-216ENST00000575599 RFLNAQ6ZTI6 216 aa13.24□□□□□ -0.29
RPAIN-216ENST00000575599 HID1Q8IV36 788 aa13.24□□□□□ -0.29
RPAIN-216ENST00000575599 BTN2A2Q8WVV5 523 aa13.24□□□□□ -0.29
RPAIN-216ENST00000575599 TSACCQ96A04 125 aaPredicted RBP13.24□□□□□ -0.29
RPAIN-216ENST00000575599 FUBP1Q96AE4 644 aaKnown RBP13.24□□□□□ -0.29
RPAIN-216ENST00000575599 PBKQ96KB5 322 aa13.24□□□□□ -0.29
RPAIN-216ENST00000575599 WDR92Q96MX6 357 aa13.24□□□□□ -0.29
RPAIN-216ENST00000575599 VAT1Q99536 393 aa13.24□□□□□ -0.29
RPAIN-216ENST00000575599 FERMT1Q9BQL6 677 aa13.24□□□□□ -0.29
RPAIN-216ENST00000575599 MLPHQ9BV36 600 aaPredicted RBP13.24□□□□□ -0.29
RPAIN-216ENST00000575599 TUBB2BQ9BVA1 445 aa13.24□□□□□ -0.29
RPAIN-216ENST00000575599 TLR10Q9BXR5 811 aa13.24□□□□□ -0.29
RPAIN-216ENST00000575599 SLC13A1Q9BZW2 595 aa13.24□□□□□ -0.29
RPAIN-216ENST00000575599 TOR4AQ9NXH8 423 aa13.24□□□□□ -0.29
RPAIN-216ENST00000575599 KLQ9UEF7 1012 aa13.24□□□□□ -0.29
RPAIN-216ENST00000575599 RSPH14Q9UHP6 348 aa13.24□□□□□ -0.29
RPAIN-216ENST00000575599 DNPEPQ9ULA0 475 aa13.24□□□□□ -0.29
RPAIN-216ENST00000575599 SNX12Q9UMY4 172 aa13.24□□□□□ -0.29
RPAIN-216ENST00000575599 NEMP2A6NFY4 417 aa13.23□□□□□ -0.29
RPAIN-216ENST00000575599 KCNN4O15554 427 aa13.23□□□□□ -0.29
RPAIN-216ENST00000575599 AQP9O43315 295 aa13.23□□□□□ -0.29
RPAIN-216ENST00000575599 TRIM16O95361 564 aa13.23□□□□□ -0.29
RPAIN-216ENST00000575599 PIRTP0C851 137 aa13.23□□□□□ -0.29
RPAIN-216ENST00000575599 ALPPL2P10696 532 aa13.23□□□□□ -0.29
RPAIN-216ENST00000575599 RBP3P10745 1247 aa13.23□□□□□ -0.29
RPAIN-216ENST00000575599 TSHRP16473 764 aa13.23□□□□□ -0.29
RPAIN-216ENST00000575599 STC1P52823 247 aa13.23□□□□□ -0.29
RPAIN-216ENST00000575599 KIAA1024LP59773 190 aa13.23□□□□□ -0.29
RPAIN-216ENST00000575599 PTSQ03393 145 aa13.23□□□□□ -0.29
RPAIN-216ENST00000575599 CDK18Q07002 472 aa13.23□□□□□ -0.29
RPAIN-216ENST00000575599 C1orf61Q13536 156 aa13.23□□□□□ -0.29
RPAIN-216ENST00000575599 ALG11Q2TAA5 492 aa13.23□□□□□ -0.29
RPAIN-216ENST00000575599 PAPD7Q5XG87 772 aaKnown RBP13.23□□□□□ -0.29
RPAIN-216ENST00000575599 DARS2Q6PI48 645 aaKnown RBP13.23□□□□□ -0.29
RPAIN-216ENST00000575599 TECPR1Q7Z6L1 1165 aa13.23□□□□□ -0.29
RPAIN-216ENST00000575599 HEATR4Q86WZ0 1026 aa13.23□□□□□ -0.29
RPAIN-216ENST00000575599 CBARPQ8N350 705 aaPredicted RBP13.23□□□□□ -0.29
RPAIN-216ENST00000575599 CHCHD4Q8N4Q1 142 aa13.23□□□□□ -0.29
RPAIN-216ENST00000575599 OR4C6Q8NH72 309 aa13.23□□□□□ -0.29
RPAIN-216ENST00000575599 ATL2Q8NHH9 583 aa13.23□□□□□ -0.29
RPAIN-216ENST00000575599 TADA1Q96BN2 335 aa13.23□□□□□ -0.29
RPAIN-216ENST00000575599 AP2M1Q96CW1 435 aa13.23□□□□□ -0.29
RPAIN-216ENST00000575599 PDXPQ96GD0 296 aa13.23□□□□□ -0.29
RPAIN-216ENST00000575599 TRIB3Q96RU7 358 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms