RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 SCAMP4Q969E2 229 aa8.67□□□□□ -1.02
SMG6-216ENST00000575176 RTP4Q96DX8 246 aa8.67□□□□□ -1.02
SMG6-216ENST00000575176 NUS1Q96E22 293 aa8.67□□□□□ -1.02
SMG6-216ENST00000575176 SCARF2Q96GP6 870 aaPredicted RBP8.67□□□□□ -1.02
SMG6-216ENST00000575176 AGAP3Q96P47 875 aa8.67□□□□□ -1.02
SMG6-216ENST00000575176 FCRL5Q96RD9 977 aa8.67□□□□□ -1.02
SMG6-216ENST00000575176 APOOQ9BUR5 198 aa8.67□□□□□ -1.02
SMG6-216ENST00000575176 SCNM1Q9BWG6 230 aa8.67□□□□□ -1.02
SMG6-216ENST00000575176 BOCQ9BWV1 1114 aa8.67□□□□□ -1.02
SMG6-216ENST00000575176 ABCG8Q9H221 673 aa8.67□□□□□ -1.02
SMG6-216ENST00000575176 GRPEL1Q9HAV7 217 aa8.67□□□□□ -1.02
SMG6-216ENST00000575176 LUC7LQ9NQ29 371 aaKnown RBP8.67□□□□□ -1.02
SMG6-216ENST00000575176 MRPL40Q9NQ50 206 aaKnown RBP8.67□□□□□ -1.02
SMG6-216ENST00000575176 NLGN3Q9NZ94 848 aa8.67□□□□□ -1.02
SMG6-216ENST00000575176 TMPRSS11EQ9UL52 423 aa8.67□□□□□ -1.02
SMG6-216ENST00000575176 BSNQ9UPA5 3926 aa8.67□□□□□ -1.02
SMG6-216ENST00000575176 DGKBQ9Y6T7 804 aa8.67□□□□□ -1.02
SMG6-216ENST00000575176 ACACAQ13085 2346 aa8.66□□□□□ -1.02
SMG6-216ENST00000575176 MIF4GDA9UHW6 222 aaKnown RBP8.66□□□□□ -1.02
SMG6-216ENST00000575176 HACD1B0YJ81 288 aa8.66□□□□□ -1.02
SMG6-216ENST00000575176 ANKRD66B4E2M5 251 aa8.66□□□□□ -1.02
SMG6-216ENST00000575176 ENC1O14682 589 aa8.66□□□□□ -1.02
SMG6-216ENST00000575176 SCAMP1O15126 338 aa8.66□□□□□ -1.02
SMG6-216ENST00000575176 FANCGO15287 622 aa8.66□□□□□ -1.02
SMG6-216ENST00000575176 AQP9O43315 295 aa8.66□□□□□ -1.02
SMG6-216ENST00000575176 CLDN7O95471 211 aa8.66□□□□□ -1.02
SMG6-216ENST00000575176 CEACAM5P06731 702 aa8.66□□□□□ -1.02
SMG6-216ENST00000575176 PIRTP0C851 137 aa8.66□□□□□ -1.02
SMG6-216ENST00000575176 MYCLP1P12525 358 aaPredicted RBP8.66□□□□□ -1.02
SMG6-216ENST00000575176 TSHRP16473 764 aa8.66□□□□□ -1.02
SMG6-216ENST00000575176 ZNF30P17039 623 aa8.66□□□□□ -1.02
SMG6-216ENST00000575176 CES1P23141 567 aa8.66□□□□□ -1.02
SMG6-216ENST00000575176 HK3P52790 923 aa8.66□□□□□ -1.02
SMG6-216ENST00000575176 RWDD2BP57060 319 aa8.66□□□□□ -1.02
SMG6-216ENST00000575176 POLR2LP62875 67 aaKnown RBP8.66□□□□□ -1.02
SMG6-216ENST00000575176 CDK3Q00526 305 aa8.66□□□□□ -1.02
SMG6-216ENST00000575176 KIF5AQ12840 1032 aa8.66□□□□□ -1.02
SMG6-216ENST00000575176 FOXC1Q12948 553 aa8.66□□□□□ -1.02
SMG6-216ENST00000575176 SGCGQ13326 291 aa8.66□□□□□ -1.02
SMG6-216ENST00000575176 MEI1Q5TIA1 1274 aa8.66□□□□□ -1.02
SMG6-216ENST00000575176 KCTD11Q693B1 232 aa8.66□□□□□ -1.02
SMG6-216ENST00000575176 DENND5AQ6IQ26 1287 aa8.66□□□□□ -1.02
SMG6-216ENST00000575176 PNCKQ6P2M8 343 aa8.66□□□□□ -1.02
SMG6-216ENST00000575176 XKR5Q6UX68 686 aa8.66□□□□□ -1.02
SMG6-216ENST00000575176 ADAMTSL4Q6UY14 1074 aa8.66□□□□□ -1.02
SMG6-216ENST00000575176 USP45Q70EL2 814 aa8.66□□□□□ -1.02
SMG6-216ENST00000575176 KIAA1328Q86T90 577 aa8.66□□□□□ -1.02
SMG6-216ENST00000575176 HEATR4Q86WZ0 1026 aa8.66□□□□□ -1.02
SMG6-216ENST00000575176 NRROSQ86YC3 692 aa8.66□□□□□ -1.02
SMG6-216ENST00000575176 SLC35F3Q8IY50 421 aa8.66□□□□□ -1.02
SMG6-216ENST00000575176 RAVER1Q8IY67 606 aaKnown RBP8.66□□□□□ -1.02
SMG6-216ENST00000575176 BBS5Q8N3I7 341 aa8.66□□□□□ -1.02
SMG6-216ENST00000575176 CHCHD4Q8N4Q1 142 aa8.66□□□□□ -1.02
SMG6-216ENST00000575176 RNF10Q8N5U6 811 aaKnown RBP8.66□□□□□ -1.02
SMG6-216ENST00000575176 CCDC112Q8NEF3 446 aa8.66□□□□□ -1.02
SMG6-216ENST00000575176 SETD7Q8WTS6 366 aaKnown RBP8.66□□□□□ -1.02
SMG6-216ENST00000575176 HTR3CQ8WXA8 447 aa8.66□□□□□ -1.02
SMG6-216ENST00000575176 SKA1Q96BD8 255 aa8.66□□□□□ -1.02
SMG6-216ENST00000575176 CNDP2Q96KP4 475 aaKnown RBP8.66□□□□□ -1.02
SMG6-216ENST00000575176 ZNF830Q96NB3 372 aaPredicted RBP8.66□□□□□ -1.02
SMG6-216ENST00000575176 CNTNAP3BQ96NU0 1288 aa8.66□□□□□ -1.02
SMG6-216ENST00000575176 CDC6Q99741 560 aa8.66□□□□□ -1.02
SMG6-216ENST00000575176 TLR10Q9BXR5 811 aa8.66□□□□□ -1.02
SMG6-216ENST00000575176 CNTNAP3Q9BZ76 1288 aa8.66□□□□□ -1.02
SMG6-216ENST00000575176 GBA3Q9H227 469 aa8.66□□□□□ -1.02
SMG6-216ENST00000575176 SLC32A1Q9H598 525 aa8.66□□□□□ -1.02
SMG6-216ENST00000575176 DNAJC28Q9NX36 388 aa8.66□□□□□ -1.02
SMG6-216ENST00000575176 FTSJ1Q9UET6 329 aa8.66□□□□□ -1.02
SMG6-216ENST00000575176 APOBEC3BQ9UH17 382 aaKnown RBP8.66□□□□□ -1.02
SMG6-216ENST00000575176 CD84Q9UIB8 345 aa8.66□□□□□ -1.02
SMG6-216ENST00000575176 ANGPTL2Q9UKU9 493 aa8.66□□□□□ -1.02
SMG6-216ENST00000575176 SLC17A4Q9Y2C5 497 aa8.66□□□□□ -1.02
SMG6-216ENST00000575176 TTLL3Q9Y4R7 772 aa8.66□□□□□ -1.02
SMG6-216ENST00000575176 NEUROG3Q9Y4Z2 214 aa8.66□□□□□ -1.02
SMG6-216ENST00000575176 PCDHGA1Q9Y5H4 931 aa8.66□□□□□ -1.02
SMG6-216ENST00000575176 OAS3Q9Y6K5 1087 aaKnown RBP8.66□□□□□ -1.02
SMG6-216ENST00000575176 CSNK1G3Q9Y6M4 447 aa8.66□□□□□ -1.02
SMG6-216ENST00000575176 A0A1W2PNU3 283 aaPredicted RBP8.65□□□□□ -1.02
SMG6-216ENST00000575176 GOLGA8CPA6NN73 597 aa8.65□□□□□ -1.02
SMG6-216ENST00000575176 LMO7DNF2Z398 122 aa8.65□□□□□ -1.02
SMG6-216ENST00000575176 F5H423 210 aaPredicted RBP8.65□□□□□ -1.02
SMG6-216ENST00000575176 FFAR2O15552 330 aa8.65□□□□□ -1.02
SMG6-216ENST00000575176 GPR39O43194 453 aa8.65□□□□□ -1.02
SMG6-216ENST00000575176 NOBOXO60393 691 aa8.65□□□□□ -1.02
SMG6-216ENST00000575176 ITGAVP06756 1048 aa8.65□□□□□ -1.02
SMG6-216ENST00000575176 CYP2A6P11509 494 aaPredicted RBP8.65□□□□□ -1.02
SMG6-216ENST00000575176 CKMT1AP12532 417 aa8.65□□□□□ -1.02
SMG6-216ENST00000575176 JUNDP17535 347 aa8.65□□□□□ -1.02
SMG6-216ENST00000575176 KCNA4P22459 653 aa8.65□□□□□ -1.02
SMG6-216ENST00000575176 XPAP23025 273 aaPredicted RBP8.65□□□□□ -1.02
SMG6-216ENST00000575176 SPINT3P49223 89 aa8.65□□□□□ -1.02
SMG6-216ENST00000575176 WNT3AP56704 352 aa8.65□□□□□ -1.02
SMG6-216ENST00000575176 DCDC1P59894 354 aa8.65□□□□□ -1.02
SMG6-216ENST00000575176 HNRNPKP61978 463 aaKnown RBP eCLIP8.65□□□□□ -1.02
SMG6-216ENST00000575176 CDK18Q07002 472 aa8.65□□□□□ -1.02
SMG6-216ENST00000575176 KHDC1Q4VXA5 237 aaKnown RBP8.65□□□□□ -1.02
SMG6-216ENST00000575176 SIRPB2Q5JXA9 342 aa8.65□□□□□ -1.02
SMG6-216ENST00000575176 ZFYVE27Q5T4F4 411 aa8.65□□□□□ -1.02
SMG6-216ENST00000575176 CFAP58Q5T655 872 aa8.65□□□□□ -1.02
SMG6-216ENST00000575176 CDCP2Q5VXM1 449 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms