RNA–Protein interactions for RNA: ENST00000575171.1

NXN-208, Transcript of nucleoredoxin, human

TSL 2

Gene NXN, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NXN-208	ENST00000575171	ZBTB17	Q13105	803 aa		9.8	□□□□□ -0.84
NXN-208	ENST00000575171	HNRNPD	Q14103	355 aa	Known RBP	9.8	□□□□□ -0.84
NXN-208	ENST00000575171	PRKD1	Q15139	912 aa	Predicted RBP	9.8	□□□□□ -0.84
NXN-208	ENST00000575171	NOMO1	Q15155	1222 aa		9.8	□□□□□ -0.84
NXN-208	ENST00000575171	CSRP2	Q16527	193 aa		9.8	□□□□□ -0.84
NXN-208	ENST00000575171	LONRF2	Q1L5Z9	754 aa		9.8	□□□□□ -0.84
NXN-208	ENST00000575171	DARS2	Q6PI48	645 aa	Known RBP	9.8	□□□□□ -0.84
NXN-208	ENST00000575171	GDPD4	Q6W3E5	623 aa		9.8	□□□□□ -0.84
NXN-208	ENST00000575171	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	9.8	□□□□□ -0.84
NXN-208	ENST00000575171	SLC36A4	Q6YBV0	504 aa		9.8	□□□□□ -0.84
NXN-208	ENST00000575171	ARMCX6	Q7L4S7	300 aa		9.8	□□□□□ -0.84
NXN-208	ENST00000575171	KBTBD6	Q86V97	674 aa		9.8	□□□□□ -0.84
NXN-208	ENST00000575171	C11orf74	Q86VG3	221 aa		9.8	□□□□□ -0.84
NXN-208	ENST00000575171	SLC13A5	Q86YT5	568 aa	Predicted RBP	9.8	□□□□□ -0.84
NXN-208	ENST00000575171	PGBD5	Q8N414	524 aa		9.8	□□□□□ -0.84
NXN-208	ENST00000575171	TEX26	Q8N6G2	289 aa		9.8	□□□□□ -0.84
NXN-208	ENST00000575171	TMIE	Q8NEW7	156 aa		9.8	□□□□□ -0.84
NXN-208	ENST00000575171	OR14C36	Q8NHC7	312 aa		9.8	□□□□□ -0.84
NXN-208	ENST00000575171	TOE1	Q96GM8	510 aa	Known RBP	9.8	□□□□□ -0.84
NXN-208	ENST00000575171	KLHL32	Q96NJ5	620 aa		9.8	□□□□□ -0.84
NXN-208	ENST00000575171	PSKH2	Q96QS6	385 aa		9.8	□□□□□ -0.84
NXN-208	ENST00000575171	SEMA3C	Q99985	751 aa		9.8	□□□□□ -0.84
NXN-208	ENST00000575171	FERMT1	Q9BQL6	677 aa		9.8	□□□□□ -0.84
NXN-208	ENST00000575171	MGME1	Q9BQP7	344 aa		9.8	□□□□□ -0.84
NXN-208	ENST00000575171	GPR174	Q9BXC1	333 aa		9.8	□□□□□ -0.84
NXN-208	ENST00000575171	OSBPL1A	Q9BXW6	950 aa		9.8	□□□□□ -0.84
NXN-208	ENST00000575171	POLR1E	Q9GZS1	481 aa	Known RBP	9.8	□□□□□ -0.84
NXN-208	ENST00000575171	BTBD1	Q9H0C5	482 aa		9.8	□□□□□ -0.84
NXN-208	ENST00000575171	NEUROG2	Q9H2A3	272 aa		9.8	□□□□□ -0.84
NXN-208	ENST00000575171	SEMA4G	Q9NTN9	838 aa		9.8	□□□□□ -0.84
NXN-208	ENST00000575171	KLHL8	Q9P2G9	620 aa	Predicted RBP	9.8	□□□□□ -0.84
NXN-208	ENST00000575171	MBD1	Q9UIS9	605 aa	Predicted RBP	9.8	□□□□□ -0.84
NXN-208	ENST00000575171	RAB23	Q9ULC3	237 aa		9.8	□□□□□ -0.84
NXN-208	ENST00000575171	RAX	Q9Y2V3	346 aa		9.8	□□□□□ -0.84
NXN-208	ENST00000575171	HELZ2	Q9BYK8	2649 aa	Known RBP	9.8	□□□□□ -0.84
NXN-208	ENST00000575171	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		9.79	□□□□□ -0.84
NXN-208	ENST00000575171	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	9.79	□□□□□ -0.84
NXN-208	ENST00000575171		F5H423	210 aa	Predicted RBP	9.79	□□□□□ -0.84
NXN-208	ENST00000575171	RHOBTB1	O94844	696 aa		9.79	□□□□□ -0.84
NXN-208	ENST00000575171	RBP3	P10745	1247 aa		9.79	□□□□□ -0.84
NXN-208	ENST00000575171	XPA	P23025	273 aa	Predicted RBP	9.79	□□□□□ -0.84
NXN-208	ENST00000575171	PTPN3	P26045	913 aa		9.79	□□□□□ -0.84
NXN-208	ENST00000575171	RBL1	P28749	1068 aa		9.79	□□□□□ -0.84
NXN-208	ENST00000575171	SERPINA4	P29622	427 aa		9.79	□□□□□ -0.84
NXN-208	ENST00000575171	ACSL1	P33121	698 aa		9.79	□□□□□ -0.84
NXN-208	ENST00000575171	DRD3	P35462	400 aa		9.79	□□□□□ -0.84
NXN-208	ENST00000575171	CSNK1D	P48730	415 aa		9.79	□□□□□ -0.84
NXN-208	ENST00000575171	DHPS	P49366	369 aa	Predicted RBP	9.79	□□□□□ -0.84
NXN-208	ENST00000575171	NEK3	P51956	506 aa		9.79	□□□□□ -0.84
NXN-208	ENST00000575171	AP1S1	P61966	158 aa		9.79	□□□□□ -0.84
NXN-208	ENST00000575171	IFI35	P80217	286 aa	Predicted RBP	9.79	□□□□□ -0.84
NXN-208	ENST00000575171	DSC2	Q02487	901 aa		9.79	□□□□□ -0.84
NXN-208	ENST00000575171	KLF1	Q13351	362 aa	Predicted RBP	9.79	□□□□□ -0.84
NXN-208	ENST00000575171	XRCC4	Q13426	336 aa		9.79	□□□□□ -0.84
NXN-208	ENST00000575171	GRM3	Q14832	879 aa		9.79	□□□□□ -0.84
NXN-208	ENST00000575171	ELF2	Q15723	593 aa		9.79	□□□□□ -0.84
NXN-208	ENST00000575171	SLC45A4	Q5BKX6	768 aa		9.79	□□□□□ -0.84
NXN-208	ENST00000575171	ZNF805	Q5CZA5	627 aa		9.79	□□□□□ -0.84
NXN-208	ENST00000575171	FBXL19	Q6PCT2	694 aa		9.79	□□□□□ -0.84
NXN-208	ENST00000575171	NCEH1	Q6PIU2	408 aa		9.79	□□□□□ -0.84
NXN-208	ENST00000575171	USP30	Q70CQ3	517 aa		9.79	□□□□□ -0.84
NXN-208	ENST00000575171	ERN2	Q76MJ5	926 aa	Known RBP	9.79	□□□□□ -0.84
NXN-208	ENST00000575171	PARS2	Q7L3T8	475 aa	Known RBP	9.79	□□□□□ -0.84
NXN-208	ENST00000575171	LPCAT2	Q7L5N7	544 aa		9.79	□□□□□ -0.84
NXN-208	ENST00000575171	FAM20C	Q8IXL6	584 aa		9.79	□□□□□ -0.84
NXN-208	ENST00000575171	TMEFF1	Q8IYR6	380 aa		9.79	□□□□□ -0.84
NXN-208	ENST00000575171	C2CD4A	Q8NCU7	369 aa	Predicted RBP	9.79	□□□□□ -0.84
NXN-208	ENST00000575171	PDCD6IP	Q8WUM4	868 aa	Known RBP	9.79	□□□□□ -0.84
NXN-208	ENST00000575171	HTR3C	Q8WXA8	447 aa		9.79	□□□□□ -0.84
NXN-208	ENST00000575171	ATG4A	Q8WYN0	398 aa		9.79	□□□□□ -0.84
NXN-208	ENST00000575171	SNX19	Q92543	992 aa		9.79	□□□□□ -0.84
NXN-208	ENST00000575171	WDR89	Q96FK6	387 aa	Predicted RBP	9.79	□□□□□ -0.84
NXN-208	ENST00000575171	ZNF419	Q96HQ0	510 aa	Predicted RBP	9.79	□□□□□ -0.84
NXN-208	ENST00000575171	LRIG1	Q96JA1	1093 aa		9.79	□□□□□ -0.84
NXN-208	ENST00000575171	AGAP3	Q96P47	875 aa		9.79	□□□□□ -0.84
NXN-208	ENST00000575171	NUDCD1	Q96RS6	583 aa		9.79	□□□□□ -0.84
NXN-208	ENST00000575171	ATP13A3	Q9H7F0	1226 aa		9.79	□□□□□ -0.84
NXN-208	ENST00000575171	SGK2	Q9HBY8	427 aa		9.79	□□□□□ -0.84
NXN-208	ENST00000575171	WSB2	Q9NYS7	404 aa	Predicted RBP	9.79	□□□□□ -0.84
NXN-208	ENST00000575171	R3HDM2	Q9Y2K5	976 aa	Known RBP	9.79	□□□□□ -0.84
NXN-208	ENST00000575171	CACNA1E	Q15878	2313 aa		9.79	□□□□□ -0.84
NXN-208	ENST00000575171	ASCC3	Q8N3C0	2202 aa	Known RBP	9.79	□□□□□ -0.84
NXN-208	ENST00000575171	C16orf96	A6NNT2	1141 aa		9.78	□□□□□ -0.84
NXN-208	ENST00000575171	MEI4	A8MW99	385 aa		9.78	□□□□□ -0.84
NXN-208	ENST00000575171	KCNN4	O15554	427 aa		9.78	□□□□□ -0.84
NXN-208	ENST00000575171	FSBP	O95073	299 aa		9.78	□□□□□ -0.84
NXN-208	ENST00000575171	SEMA4F	O95754	770 aa		9.78	□□□□□ -0.84
NXN-208	ENST00000575171	FGG	P02679	453 aa		9.78	□□□□□ -0.84
NXN-208	ENST00000575171	CR2	P20023	1033 aa		9.78	□□□□□ -0.84
NXN-208	ENST00000575171	ITGB7	P26010	798 aa		9.78	□□□□□ -0.84
NXN-208	ENST00000575171	LIMK1	P53667	647 aa		9.78	□□□□□ -0.84
NXN-208	ENST00000575171	ADPRH	P54922	357 aa		9.78	□□□□□ -0.84
NXN-208	ENST00000575171	ZNF33A	Q06730	810 aa		9.78	□□□□□ -0.84
NXN-208	ENST00000575171	NSUN2	Q08J23	767 aa	Known RBP eCLIP	9.78	□□□□□ -0.84
NXN-208	ENST00000575171	CCDC15	Q0P6D6	951 aa		9.78	□□□□□ -0.84
NXN-208	ENST00000575171	SNX1	Q13596	522 aa		9.78	□□□□□ -0.84
NXN-208	ENST00000575171	PLK5	Q496M5	336 aa		9.78	□□□□□ -0.84
NXN-208	ENST00000575171	LRRC73	Q5JTD7	316 aa		9.78	□□□□□ -0.84
NXN-208	ENST00000575171	AGBL4	Q5VU57	503 aa		9.78	□□□□□ -0.84
NXN-208	ENST00000575171	CAMK1D	Q8IU85	385 aa		9.78	□□□□□ -0.84

Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms