RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 ZNF423Q2M1K9 1284 aa11.03□□□□□ -0.64
CHD3-216ENST00000573936 WSCD2Q2TBF2 565 aa11.03□□□□□ -0.64
CHD3-216ENST00000573936 HLA-BQ31612 363 aa11.03□□□□□ -0.64
CHD3-216ENST00000573936 PAPD7Q5XG87 772 aaKnown RBP11.03□□□□□ -0.64
CHD3-216ENST00000573936 LRRC66Q68CR7 880 aa11.03□□□□□ -0.64
CHD3-216ENST00000573936 DENND2CQ68D51 928 aa11.03□□□□□ -0.64
CHD3-216ENST00000573936 Q6ZSR6 202 aa11.03□□□□□ -0.64
CHD3-216ENST00000573936 GSTA5Q7RTV2 222 aa11.03□□□□□ -0.64
CHD3-216ENST00000573936 PTAR1Q7Z6K3 402 aaPredicted RBP11.03□□□□□ -0.64
CHD3-216ENST00000573936 NLRP8Q86W28 1048 aa11.03□□□□□ -0.64
CHD3-216ENST00000573936 NRSN1Q8IZ57 195 aa11.03□□□□□ -0.64
CHD3-216ENST00000573936 CCDC89Q8N998 374 aa11.03□□□□□ -0.64
CHD3-216ENST00000573936 DEFB124Q8NES8 71 aa11.03□□□□□ -0.64
CHD3-216ENST00000573936 IPMKQ8NFU5 416 aa11.03□□□□□ -0.64
CHD3-216ENST00000573936 ATL2Q8NHH9 583 aa11.03□□□□□ -0.64
CHD3-216ENST00000573936 NUS1Q96E22 293 aa11.03□□□□□ -0.64
CHD3-216ENST00000573936 OXNAD1Q96HP4 312 aaPredicted RBP11.03□□□□□ -0.64
CHD3-216ENST00000573936 MRGPRX2Q96LB1 330 aa11.03□□□□□ -0.64
CHD3-216ENST00000573936 C16orf45Q96MC5 204 aaPredicted RBP11.03□□□□□ -0.64
CHD3-216ENST00000573936 TRABDQ9H4I3 376 aa11.03□□□□□ -0.64
CHD3-216ENST00000573936 GAREM1Q9H706 876 aa11.03□□□□□ -0.64
CHD3-216ENST00000573936 FSCN3Q9NQT6 498 aa11.03□□□□□ -0.64
CHD3-216ENST00000573936 RAD18Q9NS91 495 aa11.03□□□□□ -0.64
CHD3-216ENST00000573936 PKD2L2Q9NZM6 624 aa11.03□□□□□ -0.64
CHD3-216ENST00000573936 HACD3Q9P035 362 aa11.03□□□□□ -0.64
CHD3-216ENST00000573936 PAK5Q9P286 719 aa11.03□□□□□ -0.64
CHD3-216ENST00000573936 FEZ2Q9UHY8 353 aaPredicted RBP11.03□□□□□ -0.64
CHD3-216ENST00000573936 LHX6Q9UPM6 363 aa11.03□□□□□ -0.64
CHD3-216ENST00000573936 SNX11Q9Y5W9 270 aa11.03□□□□□ -0.64
CHD3-216ENST00000573936 SAR1BQ9Y6B6 198 aa11.03□□□□□ -0.64
CHD3-216ENST00000573936 NUMA1Q14980 2115 aa11.03□□□□□ -0.64
CHD3-216ENST00000573936 ADAMTS9Q9P2N4 1935 aa11.02□□□□□ -0.65
CHD3-216ENST00000573936 C1orf232A0A0U1RR37 186 aa11.02□□□□□ -0.65
CHD3-216ENST00000573936 POM121BA6NF01 834 aa11.02□□□□□ -0.65
CHD3-216ENST00000573936 ERI2A8K979 691 aaKnown RBP11.02□□□□□ -0.65
CHD3-216ENST00000573936 F5H423 210 aaPredicted RBP11.02□□□□□ -0.65
CHD3-216ENST00000573936 FANCGO15287 622 aa11.02□□□□□ -0.65
CHD3-216ENST00000573936 ZNF500O60304 480 aaPredicted RBP11.02□□□□□ -0.65
CHD3-216ENST00000573936 CLDN7O95471 211 aa11.02□□□□□ -0.65
CHD3-216ENST00000573936 TOP3BO95985 862 aaKnown RBP11.02□□□□□ -0.65
CHD3-216ENST00000573936 IFNB1P01574 187 aa11.02□□□□□ -0.65
CHD3-216ENST00000573936 HOXC4P09017 264 aaPredicted RBP11.02□□□□□ -0.65
CHD3-216ENST00000573936 HOXB3P14651 431 aaPredicted RBP11.02□□□□□ -0.65
CHD3-216ENST00000573936 TSHRP16473 764 aa11.02□□□□□ -0.65
CHD3-216ENST00000573936 LHCGRP22888 699 aa11.02□□□□□ -0.65
CHD3-216ENST00000573936 TEAD1P28347 426 aa11.02□□□□□ -0.65
CHD3-216ENST00000573936 IGFALSP35858 605 aa11.02□□□□□ -0.65
CHD3-216ENST00000573936 ARRB1P49407 418 aaPredicted RBP11.02□□□□□ -0.65
CHD3-216ENST00000573936 STC1P52823 247 aa11.02□□□□□ -0.65
CHD3-216ENST00000573936 GDF10P55107 478 aa11.02□□□□□ -0.65
CHD3-216ENST00000573936 PFN3P60673 137 aa11.02□□□□□ -0.65
CHD3-216ENST00000573936 ETF1P62495 437 aaKnown RBP11.02□□□□□ -0.65
CHD3-216ENST00000573936 DPTQ07507 201 aa11.02□□□□□ -0.65
CHD3-216ENST00000573936 FAM182AQ5T1J6 154 aa11.02□□□□□ -0.65
CHD3-216ENST00000573936 ESRP1Q6NXG1 681 aaKnown RBP11.02□□□□□ -0.65
CHD3-216ENST00000573936 LAYNQ6UX15 382 aa11.02□□□□□ -0.65
CHD3-216ENST00000573936 ZNF765Q7L2R6 523 aa11.02□□□□□ -0.65
CHD3-216ENST00000573936 HSD11B1LQ7Z5J1 315 aa11.02□□□□□ -0.65
CHD3-216ENST00000573936 TECPR1Q7Z6L1 1165 aa11.02□□□□□ -0.65
CHD3-216ENST00000573936 TSPAN33Q86UF1 283 aa11.02□□□□□ -0.65
CHD3-216ENST00000573936 KLHDC8BQ8IXV7 354 aa11.02□□□□□ -0.65
CHD3-216ENST00000573936 OR13H1Q8NG92 308 aa11.02□□□□□ -0.65
CHD3-216ENST00000573936 COG1Q8WTW3 980 aa11.02□□□□□ -0.65
CHD3-216ENST00000573936 MAGOHBQ96A72 148 aaKnown RBP11.02□□□□□ -0.65
CHD3-216ENST00000573936 DTD2Q96FN9 168 aa11.02□□□□□ -0.65
CHD3-216ENST00000573936 MS4A14Q96JA4 679 aa11.02□□□□□ -0.65
CHD3-216ENST00000573936 ELF4Q99607 663 aaPredicted RBP11.02□□□□□ -0.65
CHD3-216ENST00000573936 FICDQ9BVA6 458 aa11.02□□□□□ -0.65
CHD3-216ENST00000573936 GPR63Q9BZJ6 419 aa11.02□□□□□ -0.65
CHD3-216ENST00000573936 CDH19Q9H159 772 aa11.02□□□□□ -0.65
CHD3-216ENST00000573936 LRRC40Q9H9A6 602 aa11.02□□□□□ -0.65
CHD3-216ENST00000573936 ZFYVE1Q9HBF4 777 aa11.02□□□□□ -0.65
CHD3-216ENST00000573936 MBNL1Q9NR56 388 aaKnown RBP11.02□□□□□ -0.65
CHD3-216ENST00000573936 RNF14Q9UBS8 474 aa11.02□□□□□ -0.65
CHD3-216ENST00000573936 CA5BQ9Y2D0 317 aa11.02□□□□□ -0.65
CHD3-216ENST00000573936 PCDHGB2Q9Y5G2 931 aa11.02□□□□□ -0.65
CHD3-216ENST00000573936 A0A1B0GTQ1 180 aa11.01□□□□□ -0.65
CHD3-216ENST00000573936 H0Y8X5 98 aa11.01□□□□□ -0.65
CHD3-216ENST00000573936 PDE2AO00408 941 aaPredicted RBP11.01□□□□□ -0.65
CHD3-216ENST00000573936 AGTP01019 485 aa11.01□□□□□ -0.65
CHD3-216ENST00000573936 PCCBP05166 539 aa11.01□□□□□ -0.65
CHD3-216ENST00000573936 ATXN1LP0C7T5 689 aaKnown RBP11.01□□□□□ -0.65
CHD3-216ENST00000573936 GM2AP17900 193 aa11.01□□□□□ -0.65
CHD3-216ENST00000573936 HTR1BP28222 390 aa11.01□□□□□ -0.65
CHD3-216ENST00000573936 CASQ1P31415 396 aa11.01□□□□□ -0.65
CHD3-216ENST00000573936 ADRA1AP35348 466 aa11.01□□□□□ -0.65
CHD3-216ENST00000573936 TRIM23P36406 574 aa11.01□□□□□ -0.65
CHD3-216ENST00000573936 ETV3P41162 512 aa11.01□□□□□ -0.65
CHD3-216ENST00000573936 PAFAH1B1P43034 410 aa11.01□□□□□ -0.65
CHD3-216ENST00000573936 RXRGP48443 463 aa11.01□□□□□ -0.65
CHD3-216ENST00000573936 LMAN1P49257 510 aa11.01□□□□□ -0.65
CHD3-216ENST00000573936 CCT8P50990 548 aa11.01□□□□□ -0.65
CHD3-216ENST00000573936 THOP1P52888 689 aa11.01□□□□□ -0.65
CHD3-216ENST00000573936 PDE1CQ14123 709 aaPredicted RBP11.01□□□□□ -0.65
CHD3-216ENST00000573936 INPP5AQ14642 412 aa11.01□□□□□ -0.65
CHD3-216ENST00000573936 CDKN3Q16667 212 aa11.01□□□□□ -0.65
CHD3-216ENST00000573936 CYP1B1Q16678 543 aa11.01□□□□□ -0.65
CHD3-216ENST00000573936 SIRPB2Q5JXA9 342 aa11.01□□□□□ -0.65
CHD3-216ENST00000573936 ZDHHC20Q5W0Z9 365 aa11.01□□□□□ -0.65
CHD3-216ENST00000573936 PNCKQ6P2M8 343 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms