RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 AZIN1O14977 448 aa15.63■□□□□ 0.09
NUP88-207ENST00000573584 PEX11BO96011 259 aa15.63■□□□□ 0.09
NUP88-207ENST00000573584 FGF4P08620 206 aa15.63■□□□□ 0.09
NUP88-207ENST00000573584 ODC1P11926 461 aa15.63■□□□□ 0.09
NUP88-207ENST00000573584 HSD17B1P14061 328 aa15.63■□□□□ 0.09
NUP88-207ENST00000573584 CHRM3P20309 590 aa15.63■□□□□ 0.09
NUP88-207ENST00000573584 YBX1P67809 324 aaKnown RBP15.63■□□□□ 0.09
NUP88-207ENST00000573584 SLC10A7Q0GE19 358 aa15.63■□□□□ 0.09
NUP88-207ENST00000573584 BNIP2Q12982 314 aa15.63■□□□□ 0.09
NUP88-207ENST00000573584 RPS6KA2Q15349 733 aa15.63■□□□□ 0.09
NUP88-207ENST00000573584 UPP1Q16831 310 aa15.63■□□□□ 0.09
NUP88-207ENST00000573584 KLHL35Q6PF15 583 aa15.63■□□□□ 0.09
NUP88-207ENST00000573584 LRRTM3Q86VH5 581 aa15.63■□□□□ 0.09
NUP88-207ENST00000573584 METTL23Q86XA0 190 aa15.63■□□□□ 0.09
NUP88-207ENST00000573584 TNIP2Q8NFZ5 429 aa15.63■□□□□ 0.09
NUP88-207ENST00000573584 ISOC1Q96CN7 298 aa15.63■□□□□ 0.09
NUP88-207ENST00000573584 TUBGCP3Q96CW5 907 aa15.63■□□□□ 0.09
NUP88-207ENST00000573584 CENPNQ96H22 339 aaPredicted RBP15.63■□□□□ 0.09
NUP88-207ENST00000573584 TMEM209Q96SK2 561 aa15.63■□□□□ 0.09
NUP88-207ENST00000573584 SMOC2Q9H3U7 446 aa15.63■□□□□ 0.09
NUP88-207ENST00000573584 NOL6Q9H6R4 1146 aaKnown RBP15.63■□□□□ 0.09
NUP88-207ENST00000573584 POLR3BQ9NW08 1133 aaPredicted RBP15.63■□□□□ 0.09
NUP88-207ENST00000573584 GID8Q9NWU2 228 aa15.63■□□□□ 0.09
NUP88-207ENST00000573584 KCTD3Q9Y597 815 aa15.63■□□□□ 0.09
NUP88-207ENST00000573584 MROH6A6NGR9 719 aa15.63■□□□□ 0.09
NUP88-207ENST00000573584 LRRC14BA6NHZ5 514 aa15.63■□□□□ 0.09
NUP88-207ENST00000573584 J3KR12 359 aa15.63■□□□□ 0.09
NUP88-207ENST00000573584 FXYD1O00168 92 aa15.63■□□□□ 0.09
NUP88-207ENST00000573584 HAS3O00219 553 aa15.63■□□□□ 0.09
NUP88-207ENST00000573584 B3GAT3O94766 335 aa15.63■□□□□ 0.09
NUP88-207ENST00000573584 CD1DP15813 335 aa15.63■□□□□ 0.09
NUP88-207ENST00000573584 SLC6A2P23975 617 aa15.63■□□□□ 0.09
NUP88-207ENST00000573584 DSC2Q02487 901 aa15.63■□□□□ 0.09
NUP88-207ENST00000573584 PFKFB4Q16877 469 aa15.63■□□□□ 0.09
NUP88-207ENST00000573584 MARC1Q5VT66 337 aa15.63■□□□□ 0.09
NUP88-207ENST00000573584 PLEKHH3Q7Z736 793 aa15.63■□□□□ 0.09
NUP88-207ENST00000573584 CMTR2Q8IYT2 770 aaKnown RBP15.63■□□□□ 0.09
NUP88-207ENST00000573584 LRRC58Q96CX6 371 aa15.63■□□□□ 0.09
NUP88-207ENST00000573584 PABPC5Q96DU9 382 aaKnown RBP15.63■□□□□ 0.09
NUP88-207ENST00000573584 HSPBAP1Q96EW2 488 aa15.63■□□□□ 0.09
NUP88-207ENST00000573584 FEM1CQ96JP0 617 aa15.63■□□□□ 0.09
NUP88-207ENST00000573584 SLC45A3Q96JT2 553 aa15.63■□□□□ 0.09
NUP88-207ENST00000573584 ASB2Q96Q27 587 aa15.63■□□□□ 0.09
NUP88-207ENST00000573584 C9orf16Q9BUW7 83 aa15.63■□□□□ 0.09
NUP88-207ENST00000573584 OSER1Q9NX31 292 aa15.63■□□□□ 0.09
NUP88-207ENST00000573584 ACTR3BQ9P1U1 418 aa15.63■□□□□ 0.09
NUP88-207ENST00000573584 OAZ3Q9UMX2 235 aa15.63■□□□□ 0.09
NUP88-207ENST00000573584 TRIP12Q14669 1992 aaPredicted RBP15.62■□□□□ 0.09
NUP88-207ENST00000573584 OXTRP30559 389 aa15.62■□□□□ 0.09
NUP88-207ENST00000573584 RPL9P32969 192 aaKnown RBP15.62■□□□□ 0.09
NUP88-207ENST00000573584 BRCC3P46736 316 aa15.62■□□□□ 0.09
NUP88-207ENST00000573584 BEX3Q00994 111 aa15.62■□□□□ 0.09
NUP88-207ENST00000573584 LDLRAD1Q5T700 205 aa15.62■□□□□ 0.09
NUP88-207ENST00000573584 LCN8Q6JVE9 175 aa15.62■□□□□ 0.09
NUP88-207ENST00000573584 RAB44Q7Z6P3 723 aaPredicted RBP15.62■□□□□ 0.09
NUP88-207ENST00000573584 TFAP2DQ7Z6R9 452 aa15.62■□□□□ 0.09
NUP88-207ENST00000573584 CYGBQ8WWM9 190 aa15.62■□□□□ 0.09
NUP88-207ENST00000573584 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.62■□□□□ 0.09
NUP88-207ENST00000573584 KCNA7Q96RP8 456 aa15.62■□□□□ 0.09
NUP88-207ENST00000573584 TRIM8Q9BZR9 551 aa15.62■□□□□ 0.09
NUP88-207ENST00000573584 ST3GAL5Q9UNP4 418 aa15.62■□□□□ 0.09
NUP88-207ENST00000573584 TRIM64CA6NLI5 447 aa15.62■□□□□ 0.09
NUP88-207ENST00000573584 UBXN8O00124 270 aa15.62■□□□□ 0.09
NUP88-207ENST00000573584 TNPO2O14787 897 aaKnown RBP15.62■□□□□ 0.09
NUP88-207ENST00000573584 LINC00032P0C843 101 aa15.62■□□□□ 0.09
NUP88-207ENST00000573584 HGFP14210 728 aa15.62■□□□□ 0.09
NUP88-207ENST00000573584 ETFBP38117 255 aa15.62■□□□□ 0.09
NUP88-207ENST00000573584 MLLT6P55198 1093 aaPredicted RBP15.62■□□□□ 0.09
NUP88-207ENST00000573584 IHHQ14623 411 aa15.62■□□□□ 0.09
NUP88-207ENST00000573584 SLC36A3Q495N2 470 aa15.62■□□□□ 0.09
NUP88-207ENST00000573584 DHRS4L2Q6PKH6 230 aa15.62■□□□□ 0.09
NUP88-207ENST00000573584 GPR180Q86V85 440 aa15.62■□□□□ 0.09
NUP88-207ENST00000573584 MYRFLQ96LU7 910 aa15.62■□□□□ 0.09
NUP88-207ENST00000573584 TBATAQ96M53 351 aa15.62■□□□□ 0.09
NUP88-207ENST00000573584 NSUN5Q96P11 429 aaKnown RBP15.62■□□□□ 0.09
NUP88-207ENST00000573584 OSBPL6Q9BZF3 934 aa15.62■□□□□ 0.09
NUP88-207ENST00000573584 ARPC2O15144 300 aa15.61■□□□□ 0.09
NUP88-207ENST00000573584 CLIC3O95833 236 aa15.61■□□□□ 0.09
NUP88-207ENST00000573584 CCT8P50990 548 aa15.61■□□□□ 0.09
NUP88-207ENST00000573584 SCNN1BP51168 640 aa15.61■□□□□ 0.09
NUP88-207ENST00000573584 SLC5A3P53794 718 aa15.61■□□□□ 0.09
NUP88-207ENST00000573584 SIRPB2Q5JXA9 342 aa15.61■□□□□ 0.09
NUP88-207ENST00000573584 ZNF549Q6P9A3 640 aa15.61■□□□□ 0.09
NUP88-207ENST00000573584 IFNEQ86WN2 208 aa15.61■□□□□ 0.09
NUP88-207ENST00000573584 PHYKPLQ8IUZ5 450 aa15.61■□□□□ 0.09
NUP88-207ENST00000573584 ADGRG5Q8IZF4 528 aa15.61■□□□□ 0.09
NUP88-207ENST00000573584 OR10T2Q8NGX3 314 aa15.61■□□□□ 0.09
NUP88-207ENST00000573584 ADAMTS16Q8TE57 1224 aa15.61■□□□□ 0.09
NUP88-207ENST00000573584 HASPINQ8TF76 798 aa15.61■□□□□ 0.09
NUP88-207ENST00000573584 C12orf43Q96C57 262 aaKnown RBP15.61■□□□□ 0.09
NUP88-207ENST00000573584 HMCESQ96FZ2 354 aa15.61■□□□□ 0.09
NUP88-207ENST00000573584 DCUN1D5Q9BTE7 237 aa15.61■□□□□ 0.09
NUP88-207ENST00000573584 MUC3BQ9H195 1237 aa15.61■□□□□ 0.09
NUP88-207ENST00000573584 TUBB1Q9H4B7 451 aa15.61■□□□□ 0.09
NUP88-207ENST00000573584 AGO3Q9H9G7 860 aaKnown RBP15.61■□□□□ 0.09
NUP88-207ENST00000573584 SDR39U1Q9NRG7 319 aaPredicted RBP15.61■□□□□ 0.09
NUP88-207ENST00000573584 CDC14AQ9UNH5 594 aa15.61■□□□□ 0.09
NUP88-207ENST00000573584 MAGEB3O15480 346 aa15.61■□□□□ 0.09
NUP88-207ENST00000573584 MMP2P08253 660 aa15.61■□□□□ 0.09
NUP88-207ENST00000573584 SLC2A3P11169 496 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms