RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 SIRPB2Q5JXA9 342 aa10.11□□□□□ -0.79
SMG6-213ENST00000573166 PTCRAQ6ISU1 281 aaPredicted RBP10.11□□□□□ -0.79
SMG6-213ENST00000573166 LYSMD3Q7Z3D4 306 aa10.11□□□□□ -0.79
SMG6-213ENST00000573166 SPATA21Q7Z572 469 aa10.11□□□□□ -0.79
SMG6-213ENST00000573166 CMC1Q7Z7K0 106 aa10.11□□□□□ -0.79
SMG6-213ENST00000573166 SLC22A9Q8IVM8 553 aa10.11□□□□□ -0.79
SMG6-213ENST00000573166 STAG3L4Q8TBR4 150 aa10.11□□□□□ -0.79
SMG6-213ENST00000573166 MYLIPQ8WY64 445 aa10.11□□□□□ -0.79
SMG6-213ENST00000573166 ZNF689Q96CS4 500 aaPredicted RBP10.11□□□□□ -0.79
SMG6-213ENST00000573166 APOPT1Q96IL0 206 aa10.11□□□□□ -0.79
SMG6-213ENST00000573166 BTBD1Q9H0C5 482 aa10.11□□□□□ -0.79
SMG6-213ENST00000573166 EPN3Q9H201 632 aa10.11□□□□□ -0.79
SMG6-213ENST00000573166 ZFP69BQ9UJL9 534 aa10.11□□□□□ -0.79
SMG6-213ENST00000573166 PCDHGB4Q9UN71 923 aa10.11□□□□□ -0.79
SMG6-213ENST00000573166 UPK3BL1B0FP48 263 aa10.1□□□□□ -0.79
SMG6-213ENST00000573166 UPK3BL2E5RIL1 263 aa10.1□□□□□ -0.79
SMG6-213ENST00000573166 TM9SF1O15321 606 aa10.1□□□□□ -0.79
SMG6-213ENST00000573166 HAUS5O94927 633 aa10.1□□□□□ -0.79
SMG6-213ENST00000573166 GOT2P00505 430 aaKnown RBP10.1□□□□□ -0.79
SMG6-213ENST00000573166 RAB10P61026 200 aa10.1□□□□□ -0.79
SMG6-213ENST00000573166 OVGP1Q12889 678 aa10.1□□□□□ -0.79
SMG6-213ENST00000573166 PDCD2Q16342 344 aaPredicted RBP10.1□□□□□ -0.79
SMG6-213ENST00000573166 ANKS6Q68DC2 871 aa10.1□□□□□ -0.79
SMG6-213ENST00000573166 EFL1Q7Z2Z2 1120 aaKnown RBP10.1□□□□□ -0.79
SMG6-213ENST00000573166 NPAS3Q8IXF0 933 aa10.1□□□□□ -0.79
SMG6-213ENST00000573166 MREGQ8N565 214 aa10.1□□□□□ -0.79
SMG6-213ENST00000573166 NAT8LQ8N9F0 302 aa10.1□□□□□ -0.79
SMG6-213ENST00000573166 MAGEC3Q8TD91 643 aa10.1□□□□□ -0.79
SMG6-213ENST00000573166 SLCO2A1Q92959 643 aa10.1□□□□□ -0.79
SMG6-213ENST00000573166 KLHL29Q96CT2 875 aa10.1□□□□□ -0.79
SMG6-213ENST00000573166 C8orf33Q9H7E9 229 aaPredicted RBP10.1□□□□□ -0.79
SMG6-213ENST00000573166 POLR3BQ9NW08 1133 aaPredicted RBP10.1□□□□□ -0.79
SMG6-213ENST00000573166 ASF1AQ9Y294 204 aa10.1□□□□□ -0.79
SMG6-213ENST00000573166 ANKRD6Q9Y2G4 727 aa10.1□□□□□ -0.79
SMG6-213ENST00000573166 YBX2Q9Y2T7 364 aaKnown RBP10.1□□□□□ -0.79
SMG6-213ENST00000573166 MAP1BP46821 2468 aaKnown RBP10.1□□□□□ -0.79
SMG6-213ENST00000573166 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.1□□□□□ -0.79
SMG6-213ENST00000573166 MAFKO60675 156 aa10.1□□□□□ -0.79
SMG6-213ENST00000573166 MAGEC1O60732 1142 aa10.1□□□□□ -0.79
SMG6-213ENST00000573166 TRIM13O60858 407 aa10.1□□□□□ -0.79
SMG6-213ENST00000573166 PRAMEF12O95522 483 aa10.1□□□□□ -0.79
SMG6-213ENST00000573166 OAS1P00973 400 aaKnown RBP10.1□□□□□ -0.79
SMG6-213ENST00000573166 FYNP06241 537 aa10.1□□□□□ -0.79
SMG6-213ENST00000573166 SLC6A4P31645 630 aa10.1□□□□□ -0.79
SMG6-213ENST00000573166 USP4Q13107 963 aa10.1□□□□□ -0.79
SMG6-213ENST00000573166 EFTUD2Q15029 972 aaKnown RBP eCLIP10.1□□□□□ -0.79
SMG6-213ENST00000573166 PON2Q15165 354 aa10.1□□□□□ -0.79
SMG6-213ENST00000573166 CCDC153Q494R4 210 aa10.1□□□□□ -0.79
SMG6-213ENST00000573166 TANGO2Q6ICL3 276 aa10.1□□□□□ -0.79
SMG6-213ENST00000573166 C11orf96Q7Z7L8 435 aa10.1□□□□□ -0.79
SMG6-213ENST00000573166 GPR149Q86SP6 731 aa10.1□□□□□ -0.79
SMG6-213ENST00000573166 TMPRSS6Q8IU80 811 aa10.1□□□□□ -0.79
SMG6-213ENST00000573166 VCXQ9H320 206 aa10.1□□□□□ -0.79
SMG6-213ENST00000573166 RIC8BQ9NVN3 520 aa10.1□□□□□ -0.79
SMG6-213ENST00000573166 BAG5Q9UL15 447 aa10.1□□□□□ -0.79
SMG6-213ENST00000573166 CCL26Q9Y258 94 aa10.1□□□□□ -0.79
SMG6-213ENST00000573166 NME7Q9Y5B8 376 aa10.1□□□□□ -0.79
SMG6-213ENST00000573166 A0A087X1B8 175 aa10.1□□□□□ -0.79
SMG6-213ENST00000573166 LEFTY1O75610 366 aa10.1□□□□□ -0.79
SMG6-213ENST00000573166 SERPINB4P48594 390 aa10.1□□□□□ -0.79
SMG6-213ENST00000573166 PRKD1Q15139 912 aaPredicted RBP10.1□□□□□ -0.79
SMG6-213ENST00000573166 ZNF852Q6ZMS4 543 aa10.1□□□□□ -0.79
SMG6-213ENST00000573166 ADGRD2Q7Z7M1 963 aa10.1□□□□□ -0.79
SMG6-213ENST00000573166 SERPINA9Q86WD7 417 aa10.1□□□□□ -0.79
SMG6-213ENST00000573166 SUGP1Q8IWZ8 645 aaKnown RBP10.1□□□□□ -0.79
SMG6-213ENST00000573166 SPATA6LQ8N4H0 392 aa10.1□□□□□ -0.79
SMG6-213ENST00000573166 AHCYL2Q96HN2 611 aaKnown RBP10.1□□□□□ -0.79
SMG6-213ENST00000573166 TUBB6Q9BUF5 446 aa10.1□□□□□ -0.79
SMG6-213ENST00000573166 CAB39LQ9H9S4 337 aa10.1□□□□□ -0.79
SMG6-213ENST00000573166 KCTD5Q9NXV2 234 aa10.1□□□□□ -0.79
SMG6-213ENST00000573166 OTOFQ9HC10 1997 aa10.1□□□□□ -0.79
SMG6-213ENST00000573166 LOC285556D6RIA3 1793 aa10.1□□□□□ -0.79
SMG6-213ENST00000573166 GOLGB1Q14789 3259 aaKnown RBP10.1□□□□□ -0.79
SMG6-213ENST00000573166 URB1O60287 2271 aaKnown RBP10.1□□□□□ -0.79
SMG6-213ENST00000573166 TTC34A8MYJ7 566 aa10.09□□□□□ -0.79
SMG6-213ENST00000573166 SLC7A4O43246 635 aa10.09□□□□□ -0.79
SMG6-213ENST00000573166 UGT1A9O60656 530 aa10.09□□□□□ -0.79
SMG6-213ENST00000573166 CLDN7O95471 211 aa10.09□□□□□ -0.79
SMG6-213ENST00000573166 NUDT17P0C025 328 aa10.09□□□□□ -0.79
SMG6-213ENST00000573166 UGT1A6P19224 532 aa10.09□□□□□ -0.79
SMG6-213ENST00000573166 BGNP21810 368 aa10.09□□□□□ -0.79
SMG6-213ENST00000573166 UGT1A1P22309 533 aa10.09□□□□□ -0.79
SMG6-213ENST00000573166 UGT1A4P22310 534 aa10.09□□□□□ -0.79
SMG6-213ENST00000573166 GRK2P25098 689 aa10.09□□□□□ -0.79
SMG6-213ENST00000573166 UGT1A3P35503 534 aa10.09□□□□□ -0.79
SMG6-213ENST00000573166 UGT1A5P35504 534 aa10.09□□□□□ -0.79
SMG6-213ENST00000573166 GRIA4P48058 902 aa10.09□□□□□ -0.79
SMG6-213ENST00000573166 RAP1GDS1P52306 607 aa10.09□□□□□ -0.79
SMG6-213ENST00000573166 BTKQ06187 659 aa10.09□□□□□ -0.79
SMG6-213ENST00000573166 WASHC5Q12768 1159 aa10.09□□□□□ -0.79
SMG6-213ENST00000573166 ELAVL3Q14576 367 aaKnown RBP10.09□□□□□ -0.79
SMG6-213ENST00000573166 RALGPS1Q5JS13 557 aa10.09□□□□□ -0.79
SMG6-213ENST00000573166 TERB1Q8NA31 727 aa10.09□□□□□ -0.79
SMG6-213ENST00000573166 KCTD4Q8WVF5 259 aa10.09□□□□□ -0.79
SMG6-213ENST00000573166 TUBGCP3Q96CW5 907 aa10.09□□□□□ -0.79
SMG6-213ENST00000573166 UGT1A7Q9HAW7 530 aa10.09□□□□□ -0.79
SMG6-213ENST00000573166 UGT1A10Q9HAW8 530 aa10.09□□□□□ -0.79
SMG6-213ENST00000573166 UGT1A8Q9HAW9 530 aa10.09□□□□□ -0.79
SMG6-213ENST00000573166 FPGTO14772 594 aa10.09□□□□□ -0.79
SMG6-213ENST00000573166 SCAMP1O15126 338 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms