RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 PAXBP1Q9Y5B6 917 aa9.31□□□□□ -0.92
NPLOC4-210ENST00000572824 HS3ST3A1Q9Y663 406 aa9.31□□□□□ -0.92
NPLOC4-210ENST00000572824 LRRC53A6NM62 1247 aa9.3□□□□□ -0.92
NPLOC4-210ENST00000572824 SIGLEC16A6NMB1 481 aa9.3□□□□□ -0.92
NPLOC4-210ENST00000572824 A8MX80 341 aa9.3□□□□□ -0.92
NPLOC4-210ENST00000572824 F8W735 103 aaPredicted RBP9.3□□□□□ -0.92
NPLOC4-210ENST00000572824 MAGEC1O60732 1142 aa9.3□□□□□ -0.92
NPLOC4-210ENST00000572824 PCCBP05166 539 aa9.3□□□□□ -0.92
NPLOC4-210ENST00000572824 C6P13671 934 aa9.3□□□□□ -0.92
NPLOC4-210ENST00000572824 HGFP14210 728 aa9.3□□□□□ -0.92
NPLOC4-210ENST00000572824 TSHRP16473 764 aa9.3□□□□□ -0.92
NPLOC4-210ENST00000572824 NUDT1P36639 197 aa9.3□□□□□ -0.92
NPLOC4-210ENST00000572824 ZNF143P52747 638 aaPredicted RBP9.3□□□□□ -0.92
NPLOC4-210ENST00000572824 CXADRP78310 365 aa9.3□□□□□ -0.92
NPLOC4-210ENST00000572824 RALGDSQ12967 914 aa9.3□□□□□ -0.92
NPLOC4-210ENST00000572824 MTA1Q13330 715 aa9.3□□□□□ -0.92
NPLOC4-210ENST00000572824 ILKQ13418 452 aa9.3□□□□□ -0.92
NPLOC4-210ENST00000572824 SERINC3Q13530 473 aa9.3□□□□□ -0.92
NPLOC4-210ENST00000572824 ALG11Q2TAA5 492 aa9.3□□□□□ -0.92
NPLOC4-210ENST00000572824 WSCD2Q2TBF2 565 aa9.3□□□□□ -0.92
NPLOC4-210ENST00000572824 ARL13BQ3SXY8 428 aa9.3□□□□□ -0.92
NPLOC4-210ENST00000572824 EXOSC6Q5RKV6 272 aaKnown RBP9.3□□□□□ -0.92
NPLOC4-210ENST00000572824 FKBP15Q5T1M5 1219 aa9.3□□□□□ -0.92
NPLOC4-210ENST00000572824 TXNRD3NBQ6F5E7 133 aa9.3□□□□□ -0.92
NPLOC4-210ENST00000572824 TTC7BQ86TV6 843 aa9.3□□□□□ -0.92
NPLOC4-210ENST00000572824 MCOLN2Q8IZK6 566 aa9.3□□□□□ -0.92
NPLOC4-210ENST00000572824 MSANTD4Q8NCY6 345 aa9.3□□□□□ -0.92
NPLOC4-210ENST00000572824 ISG20Q96AZ6 181 aaKnown RBP9.3□□□□□ -0.92
NPLOC4-210ENST00000572824 HIC2Q96JB3 615 aa9.3□□□□□ -0.92
NPLOC4-210ENST00000572824 FEM1CQ96JP0 617 aa9.3□□□□□ -0.92
NPLOC4-210ENST00000572824 RHOVQ96L33 236 aa9.3□□□□□ -0.92
NPLOC4-210ENST00000572824 GDAP1L1Q96MZ0 367 aa9.3□□□□□ -0.92
NPLOC4-210ENST00000572824 SNRNP25Q9BV90 132 aaKnown RBP9.3□□□□□ -0.92
NPLOC4-210ENST00000572824 TMPRSS13Q9BYE2 586 aa9.3□□□□□ -0.92
NPLOC4-210ENST00000572824 TTYH3Q9C0H2 523 aa9.3□□□□□ -0.92
NPLOC4-210ENST00000572824 SLC39A8Q9C0K1 460 aa9.3□□□□□ -0.92
NPLOC4-210ENST00000572824 LRRC19Q9H756 370 aa9.3□□□□□ -0.92
NPLOC4-210ENST00000572824 MRPL40Q9NQ50 206 aaKnown RBP9.3□□□□□ -0.92
NPLOC4-210ENST00000572824 ETNK2Q9NVF9 386 aa9.3□□□□□ -0.92
NPLOC4-210ENST00000572824 TPX2Q9ULW0 747 aaKnown RBP9.3□□□□□ -0.92
NPLOC4-210ENST00000572824 AP4E1Q9UPM8 1137 aa9.3□□□□□ -0.92
NPLOC4-210ENST00000572824 ENTPD2Q9Y5L3 495 aa9.3□□□□□ -0.92
NPLOC4-210ENST00000572824 SDK2Q58EX2 2172 aa9.3□□□□□ -0.92
NPLOC4-210ENST00000572824 FLNBO75369 2602 aaKnown RBP9.29□□□□□ -0.92
NPLOC4-210ENST00000572824 MEGF11A6BM72 1044 aa9.29□□□□□ -0.92
NPLOC4-210ENST00000572824 FPGTO14772 594 aa9.29□□□□□ -0.92
NPLOC4-210ENST00000572824 YY2O15391 372 aa9.29□□□□□ -0.92
NPLOC4-210ENST00000572824 TSPAN6O43657 245 aa9.29□□□□□ -0.92
NPLOC4-210ENST00000572824 IGSF6O95976 241 aa9.29□□□□□ -0.92
NPLOC4-210ENST00000572824 CALB1P05937 261 aa9.29□□□□□ -0.92
NPLOC4-210ENST00000572824 TNFAIP3P21580 790 aa9.29□□□□□ -0.92
NPLOC4-210ENST00000572824 IL1R2P27930 398 aa9.29□□□□□ -0.92
NPLOC4-210ENST00000572824 EIF4A3P38919 411 aaKnown RBP9.29□□□□□ -0.92
NPLOC4-210ENST00000572824 MMP12P39900 470 aa9.29□□□□□ -0.92
NPLOC4-210ENST00000572824 RABIFP47224 123 aa9.29□□□□□ -0.92
NPLOC4-210ENST00000572824 PAPOLAP51003 745 aaKnown RBP9.29□□□□□ -0.92
NPLOC4-210ENST00000572824 TPI1P60174 286 aa9.29□□□□□ -0.92
NPLOC4-210ENST00000572824 HNRNPKP61978 463 aaKnown RBP eCLIP9.29□□□□□ -0.92
NPLOC4-210ENST00000572824 SNRPD1P62314 119 aaKnown RBP9.29□□□□□ -0.92
NPLOC4-210ENST00000572824 MYL5Q02045 173 aa9.29□□□□□ -0.92
NPLOC4-210ENST00000572824 SGCGQ13326 291 aa9.29□□□□□ -0.92
NPLOC4-210ENST00000572824 MAMLD1Q13495 774 aa9.29□□□□□ -0.92
NPLOC4-210ENST00000572824 STX1AQ16623 288 aa9.29□□□□□ -0.92
NPLOC4-210ENST00000572824 ISXQ2M1V0 245 aa9.29□□□□□ -0.92
NPLOC4-210ENST00000572824 HP1BP3Q5SSJ5 553 aaPredicted RBP9.29□□□□□ -0.92
NPLOC4-210ENST00000572824 TRIM72Q6ZMU5 477 aa9.29□□□□□ -0.92
NPLOC4-210ENST00000572824 CLEC17AQ6ZS10 378 aa9.29□□□□□ -0.92
NPLOC4-210ENST00000572824 ZNF571Q7Z3V5 609 aaPredicted RBP9.29□□□□□ -0.92
NPLOC4-210ENST00000572824 RD3Q7Z3Z2 195 aa9.29□□□□□ -0.92
NPLOC4-210ENST00000572824 TMPRSS9Q7Z410 1059 aa9.29□□□□□ -0.92
NPLOC4-210ENST00000572824 IRF2BP2Q7Z5L9 587 aa9.29□□□□□ -0.92
NPLOC4-210ENST00000572824 HID1Q8IV36 788 aa9.29□□□□□ -0.92
NPLOC4-210ENST00000572824 AGGF1Q8N302 714 aaeCLIP9.29□□□□□ -0.92
NPLOC4-210ENST00000572824 CCL4L1Q8NHW4 92 aa9.29□□□□□ -0.92
NPLOC4-210ENST00000572824 CXorf40AQ8TE69 158 aa9.29□□□□□ -0.92
NPLOC4-210ENST00000572824 FGF11Q92914 225 aa9.29□□□□□ -0.92
NPLOC4-210ENST00000572824 VCPIP1Q96JH7 1222 aa9.29□□□□□ -0.92
NPLOC4-210ENST00000572824 LENG8Q96PV6 779 aaPredicted RBP9.29□□□□□ -0.92
NPLOC4-210ENST00000572824 ERGIC2Q96RQ1 377 aa9.29□□□□□ -0.92
NPLOC4-210ENST00000572824 BOCQ9BWV1 1114 aa9.29□□□□□ -0.92
NPLOC4-210ENST00000572824 FOXP3Q9BZS1 431 aa9.29□□□□□ -0.92
NPLOC4-210ENST00000572824 DHX35Q9H5Z1 703 aaKnown RBP9.29□□□□□ -0.92
NPLOC4-210ENST00000572824 SUDS3Q9H7L9 328 aaPredicted RBP9.29□□□□□ -0.92
NPLOC4-210ENST00000572824 FGF22Q9HCT0 170 aa9.29□□□□□ -0.92
NPLOC4-210ENST00000572824 IPO11Q9UI26 975 aaKnown RBP9.29□□□□□ -0.92
NPLOC4-210ENST00000572824 A0A1W2PQM1 296 aa9.28□□□□□ -0.92
NPLOC4-210ENST00000572824 TSPAN11A1L157 253 aa9.28□□□□□ -0.92
NPLOC4-210ENST00000572824 TMEM202A6NGA9 273 aa9.28□□□□□ -0.92
NPLOC4-210ENST00000572824 DDX3XO00571 662 aaKnown RBP eCLIP9.28□□□□□ -0.92
NPLOC4-210ENST00000572824 TM7SF2O76062 418 aa9.28□□□□□ -0.92
NPLOC4-210ENST00000572824 ALX3O95076 343 aa9.28□□□□□ -0.92
NPLOC4-210ENST00000572824 POP4O95707 220 aaKnown RBP9.28□□□□□ -0.92
NPLOC4-210ENST00000572824 PF4P02776 101 aa9.28□□□□□ -0.92
NPLOC4-210ENST00000572824 SKILP12757 684 aa9.28□□□□□ -0.92
NPLOC4-210ENST00000572824 PSMA2P25787 234 aa9.28□□□□□ -0.92
NPLOC4-210ENST00000572824 THOP1P52888 689 aa9.28□□□□□ -0.92
NPLOC4-210ENST00000572824 SLC20A2Q08357 652 aa9.28□□□□□ -0.92
NPLOC4-210ENST00000572824 INPP5AQ14642 412 aa9.28□□□□□ -0.92
NPLOC4-210ENST00000572824 SMTNL2Q2TAL5 461 aa9.28□□□□□ -0.92
NPLOC4-210ENST00000572824 ANO6Q4KMQ2 910 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms