RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 PDLIM2Q96JY6 352 aa8.69□□□□□ -1.02
SMG6-210ENST00000572205 TBATAQ96M53 351 aa8.69□□□□□ -1.02
SMG6-210ENST00000572205 AGAP2Q99490 1192 aa8.69□□□□□ -1.02
SMG6-210ENST00000572205 PRDM9Q9NQV7 894 aa8.69□□□□□ -1.02
SMG6-210ENST00000572205 NFKBIL1Q9UBC1 381 aaPredicted RBP8.69□□□□□ -1.02
SMG6-210ENST00000572205 KLK13Q9UKR3 277 aa8.69□□□□□ -1.02
SMG6-210ENST00000572205 PHTF1Q9UMS5 762 aa8.69□□□□□ -1.02
SMG6-210ENST00000572205 CHKBQ9Y259 395 aa8.69□□□□□ -1.02
SMG6-210ENST00000572205 OR1A2Q9Y585 309 aa8.69□□□□□ -1.02
SMG6-210ENST00000572205 SPO11Q9Y5K1 396 aa8.69□□□□□ -1.02
SMG6-210ENST00000572205 IGSF10Q6WRI0 2623 aa8.69□□□□□ -1.02
SMG6-210ENST00000572205 ATMQ13315 3056 aa8.69□□□□□ -1.02
SMG6-210ENST00000572205 A0A1W2PQ67 120 aa8.68□□□□□ -1.02
SMG6-210ENST00000572205 CCDC66A2RUB6 948 aa8.68□□□□□ -1.02
SMG6-210ENST00000572205 A8MX80 341 aa8.68□□□□□ -1.02
SMG6-210ENST00000572205 FPGTO14772 594 aa8.68□□□□□ -1.02
SMG6-210ENST00000572205 PPP1R12AO14974 1030 aaPredicted RBP8.68□□□□□ -1.02
SMG6-210ENST00000572205 ARHGAP6O43182 974 aa8.68□□□□□ -1.02
SMG6-210ENST00000572205 HYAL3O43820 417 aaPredicted RBP8.68□□□□□ -1.02
SMG6-210ENST00000572205 NEBLO76041 1014 aa8.68□□□□□ -1.02
SMG6-210ENST00000572205 ZRANB2O95218 330 aaKnown RBP eCLIP8.68□□□□□ -1.02
SMG6-210ENST00000572205 HOXC4P09017 264 aaPredicted RBP8.68□□□□□ -1.02
SMG6-210ENST00000572205 ZFXP17010 805 aaPredicted RBP8.68□□□□□ -1.02
SMG6-210ENST00000572205 NFKB1P19838 968 aa8.68□□□□□ -1.02
SMG6-210ENST00000572205 TEAD1P28347 426 aa8.68□□□□□ -1.02
SMG6-210ENST00000572205 CA5AP35218 305 aa8.68□□□□□ -1.02
SMG6-210ENST00000572205 NR2C2P49116 596 aa8.68□□□□□ -1.02
SMG6-210ENST00000572205 CLDN6P56747 220 aa8.68□□□□□ -1.02
SMG6-210ENST00000572205 GSDMDP57764 484 aa8.68□□□□□ -1.02
SMG6-210ENST00000572205 COPS2P61201 443 aa8.68□□□□□ -1.02
SMG6-210ENST00000572205 RPL26P61254 145 aaKnown RBP8.68□□□□□ -1.02
SMG6-210ENST00000572205 YPEL5P62699 121 aa8.68□□□□□ -1.02
SMG6-210ENST00000572205 OTUD4Q01804 1114 aaKnown RBP8.68□□□□□ -1.02
SMG6-210ENST00000572205 DPTQ07507 201 aa8.68□□□□□ -1.02
SMG6-210ENST00000572205 TFDP2Q14188 446 aa8.68□□□□□ -1.02
SMG6-210ENST00000572205 GALNT3Q14435 633 aa8.68□□□□□ -1.02
SMG6-210ENST00000572205 INPP5AQ14642 412 aa8.68□□□□□ -1.02
SMG6-210ENST00000572205 LRRC14Q15048 493 aa8.68□□□□□ -1.02
SMG6-210ENST00000572205 TEX44Q53QW1 395 aa8.68□□□□□ -1.02
SMG6-210ENST00000572205 SLC45A4Q5BKX6 768 aa8.68□□□□□ -1.02
SMG6-210ENST00000572205 ARMC12Q5T9G4 340 aa8.68□□□□□ -1.02
SMG6-210ENST00000572205 KAZNQ674X7 775 aa8.68□□□□□ -1.02
SMG6-210ENST00000572205 ERAP2Q6P179 960 aa8.68□□□□□ -1.02
SMG6-210ENST00000572205 Q6ZVL8 140 aa8.68□□□□□ -1.02
SMG6-210ENST00000572205 SFTPA2Q8IWL1 248 aa8.68□□□□□ -1.02
SMG6-210ENST00000572205 RCOR2Q8IZ40 523 aa8.68□□□□□ -1.02
SMG6-210ENST00000572205 PNPLA1Q8N8W4 532 aa8.68□□□□□ -1.02
SMG6-210ENST00000572205 SLC35B2Q8TB61 432 aa8.68□□□□□ -1.02
SMG6-210ENST00000572205 OR1E3Q8WZA6 343 aa8.68□□□□□ -1.02
SMG6-210ENST00000572205 COX14Q96I36 57 aa8.68□□□□□ -1.02
SMG6-210ENST00000572205 MRGPRX2Q96LB1 330 aa8.68□□□□□ -1.02
SMG6-210ENST00000572205 RBM15Q96T37 977 aaKnown RBP eCLIP8.68□□□□□ -1.02
SMG6-210ENST00000572205 FAM118BQ9BPY3 351 aa8.68□□□□□ -1.02
SMG6-210ENST00000572205 MLPHQ9BV36 600 aaPredicted RBP8.68□□□□□ -1.02
SMG6-210ENST00000572205 PRR14Q9BWN1 585 aa8.68□□□□□ -1.02
SMG6-210ENST00000572205 HEMGNQ9BXL5 484 aa8.68□□□□□ -1.02
SMG6-210ENST00000572205 TEX101Q9BY14 249 aa8.68□□□□□ -1.02
SMG6-210ENST00000572205 FRMD8Q9BZ67 464 aaPredicted RBP8.68□□□□□ -1.02
SMG6-210ENST00000572205 OSBPL8Q9BZF1 889 aa8.68□□□□□ -1.02
SMG6-210ENST00000572205 SLC25A51Q9H1U9 297 aa8.68□□□□□ -1.02
SMG6-210ENST00000572205 USP29Q9HBJ7 922 aa8.68□□□□□ -1.02
SMG6-210ENST00000572205 GLOD4Q9HC38 313 aa8.68□□□□□ -1.02
SMG6-210ENST00000572205 PCDH9Q9HC56 1237 aa8.68□□□□□ -1.02
SMG6-210ENST00000572205 CNOT6Q9ULM6 557 aaKnown RBP8.68□□□□□ -1.02
SMG6-210ENST00000572205 RPL26L1Q9UNX3 145 aaKnown RBP8.68□□□□□ -1.02
SMG6-210ENST00000572205 PIKFYVEQ9Y2I7 2098 aa8.68□□□□□ -1.02
SMG6-210ENST00000572205 SPENQ96T58 3664 aaKnown RBP8.67□□□□□ -1.02
SMG6-210ENST00000572205 LOC285095A0A1B0GVY8 99 aa8.67□□□□□ -1.02
SMG6-210ENST00000572205 PRR19A6NJB7 356 aa8.67□□□□□ -1.02
SMG6-210ENST00000572205 FADS2P1A8MWK0 482 aa8.67□□□□□ -1.02
SMG6-210ENST00000572205 NEMP1O14524 444 aa8.67□□□□□ -1.02
SMG6-210ENST00000572205 GAPDHSO14556 408 aaPredicted RBP8.67□□□□□ -1.02
SMG6-210ENST00000572205 TOR1BO14657 336 aa8.67□□□□□ -1.02
SMG6-210ENST00000572205 AURKAO14965 403 aa8.67□□□□□ -1.02
SMG6-210ENST00000572205 TNFSF14O43557 240 aa8.67□□□□□ -1.02
SMG6-210ENST00000572205 SIGLEC6O43699 453 aa8.67□□□□□ -1.02
SMG6-210ENST00000572205 MAGEC1O60732 1142 aa8.67□□□□□ -1.02
SMG6-210ENST00000572205 DXOO77932 396 aaKnown RBP8.67□□□□□ -1.02
SMG6-210ENST00000572205 PCCBP05166 539 aa8.67□□□□□ -1.02
SMG6-210ENST00000572205 MYF5P13349 255 aa8.67□□□□□ -1.02
SMG6-210ENST00000572205 ACP1P24666 158 aa8.67□□□□□ -1.02
SMG6-210ENST00000572205 RBL1P28749 1068 aa8.67□□□□□ -1.02
SMG6-210ENST00000572205 ADRA1AP35348 466 aa8.67□□□□□ -1.02
SMG6-210ENST00000572205 CHRNA4P43681 627 aa8.67□□□□□ -1.02
SMG6-210ENST00000572205 ARRB1P49407 418 aaPredicted RBP8.67□□□□□ -1.02
SMG6-210ENST00000572205 PDX1P52945 283 aa8.67□□□□□ -1.02
SMG6-210ENST00000572205 GDF10P55107 478 aa8.67□□□□□ -1.02
SMG6-210ENST00000572205 CACNA1BQ00975 2339 aa8.67□□□□□ -1.02
SMG6-210ENST00000572205 AP1B1Q10567 949 aa8.67□□□□□ -1.02
SMG6-210ENST00000572205 XRCC4Q13426 336 aa8.67□□□□□ -1.02
SMG6-210ENST00000572205 OLIG2Q13516 323 aa8.67□□□□□ -1.02
SMG6-210ENST00000572205 OASLQ15646 514 aaKnown RBP8.67□□□□□ -1.02
SMG6-210ENST00000572205 SMAD1Q15797 465 aaKnown RBP8.67□□□□□ -1.02
SMG6-210ENST00000572205 HENMT1Q5T8I9 393 aaKnown RBP8.67□□□□□ -1.02
SMG6-210ENST00000572205 MICALCLQ6ZW33 695 aa8.67□□□□□ -1.02
SMG6-210ENST00000572205 ZNF765Q7L2R6 523 aa8.67□□□□□ -1.02
SMG6-210ENST00000572205 LYSMD3Q7Z3D4 306 aa8.67□□□□□ -1.02
SMG6-210ENST00000572205 ZC3H18Q86VM9 953 aaKnown RBP8.67□□□□□ -1.02
SMG6-210ENST00000572205 MARCH9Q86YJ5 346 aa8.67□□□□□ -1.02
SMG6-210ENST00000572205 DCP2Q8IU60 420 aaKnown RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms