RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 RBP3P10745 1247 aa13.8□□□□□ -0.2
HERPUD1-218ENST00000569569 CKMT2P17540 419 aa13.8□□□□□ -0.2
HERPUD1-218ENST00000569569 KELP23276 732 aa13.8□□□□□ -0.2
HERPUD1-218ENST00000569569 TEAD1P28347 426 aa13.8□□□□□ -0.2
HERPUD1-218ENST00000569569 HK3P52790 923 aa13.8□□□□□ -0.2
HERPUD1-218ENST00000569569 STC1P52823 247 aa13.8□□□□□ -0.2
HERPUD1-218ENST00000569569 EIF3EP60228 445 aaKnown RBP13.8□□□□□ -0.2
HERPUD1-218ENST00000569569 PCSK7Q16549 785 aa13.8□□□□□ -0.2
HERPUD1-218ENST00000569569 PRRT3Q5FWE3 981 aa13.8□□□□□ -0.2
HERPUD1-218ENST00000569569 CCDC70Q6NSX1 233 aa13.8□□□□□ -0.2
HERPUD1-218ENST00000569569 KDELC2Q7Z4H8 507 aa13.8□□□□□ -0.2
HERPUD1-218ENST00000569569 RAB44Q7Z6P3 723 aaPredicted RBP13.8□□□□□ -0.2
HERPUD1-218ENST00000569569 CDKL3Q8IVW4 592 aaPredicted RBP13.8□□□□□ -0.2
HERPUD1-218ENST00000569569 NRSN1Q8IZ57 195 aa13.8□□□□□ -0.2
HERPUD1-218ENST00000569569 RBFAQ8N0V3 343 aa13.8□□□□□ -0.2
HERPUD1-218ENST00000569569 PELI3Q8N2H9 469 aa13.8□□□□□ -0.2
HERPUD1-218ENST00000569569 CHCHD4Q8N4Q1 142 aa13.8□□□□□ -0.2
HERPUD1-218ENST00000569569 TTC13Q8NBP0 860 aa13.8□□□□□ -0.2
HERPUD1-218ENST00000569569 CCHCR1Q8TD31 782 aa13.8□□□□□ -0.2
HERPUD1-218ENST00000569569 LMX1AQ8TE12 382 aa13.8□□□□□ -0.2
HERPUD1-218ENST00000569569 TSACCQ96A04 125 aaPredicted RBP13.8□□□□□ -0.2
HERPUD1-218ENST00000569569 FCRL5Q96RD9 977 aa13.8□□□□□ -0.2
HERPUD1-218ENST00000569569 TRIB3Q96RU7 358 aa13.8□□□□□ -0.2
HERPUD1-218ENST00000569569 SCNM1Q9BWG6 230 aa13.8□□□□□ -0.2
HERPUD1-218ENST00000569569 TCEAL2Q9H3H9 227 aaPredicted RBP13.8□□□□□ -0.2
HERPUD1-218ENST00000569569 WDR26Q9H7D7 661 aa13.8□□□□□ -0.2
HERPUD1-218ENST00000569569 KLQ9UEF7 1012 aa13.8□□□□□ -0.2
HERPUD1-218ENST00000569569 FAM153AQ9UHL3 310 aa13.8□□□□□ -0.2
HERPUD1-218ENST00000569569 PCDHGA1Q9Y5H4 931 aa13.8□□□□□ -0.2
HERPUD1-218ENST00000569569 SPEGQ15772 3267 aa13.8□□□□□ -0.2
HERPUD1-218ENST00000569569 SCN8AQ9UQD0 1980 aa13.8□□□□□ -0.2
HERPUD1-218ENST00000569569 C1orf232A0A0U1RR37 186 aa13.79□□□□□ -0.2
HERPUD1-218ENST00000569569 GOLGA6CA6NDK9 693 aa13.79□□□□□ -0.2
HERPUD1-218ENST00000569569 GOLGA6BA6NDN3 693 aa13.79□□□□□ -0.2
HERPUD1-218ENST00000569569 K7ESM1 405 aa13.79□□□□□ -0.2
HERPUD1-218ENST00000569569 TPP1O14773 563 aa13.79□□□□□ -0.2
HERPUD1-218ENST00000569569 TNFRSF10CO14798 259 aa13.79□□□□□ -0.2
HERPUD1-218ENST00000569569 FFAR2O15552 330 aa13.79□□□□□ -0.2
HERPUD1-218ENST00000569569 HYAL3O43820 417 aaPredicted RBP13.79□□□□□ -0.2
HERPUD1-218ENST00000569569 PMPCBO75439 489 aa13.79□□□□□ -0.2
HERPUD1-218ENST00000569569 ZNF189O75820 626 aaPredicted RBP13.79□□□□□ -0.2
HERPUD1-218ENST00000569569 RASGRP1O95267 797 aa13.79□□□□□ -0.2
HERPUD1-218ENST00000569569 TOP3BO95985 862 aaKnown RBP13.79□□□□□ -0.2
HERPUD1-218ENST00000569569 TNFP01375 233 aa13.79□□□□□ -0.2
HERPUD1-218ENST00000569569 PYGLP06737 847 aa13.79□□□□□ -0.2
HERPUD1-218ENST00000569569 GOLGA6DP0CG33 693 aa13.79□□□□□ -0.2
HERPUD1-218ENST00000569569 CDK4P11802 303 aa13.79□□□□□ -0.2
HERPUD1-218ENST00000569569 CTSEP14091 401 aa13.79□□□□□ -0.2
HERPUD1-218ENST00000569569 NFKB1P19838 968 aa13.79□□□□□ -0.2
HERPUD1-218ENST00000569569 SRP54P61011 504 aaKnown RBP13.79□□□□□ -0.2
HERPUD1-218ENST00000569569 DNAJC3Q13217 504 aa13.79□□□□□ -0.2
HERPUD1-218ENST00000569569 GALNT3Q14435 633 aa13.79□□□□□ -0.2
HERPUD1-218ENST00000569569 CDKN3Q16667 212 aa13.79□□□□□ -0.2
HERPUD1-218ENST00000569569 ALG11Q2TAA5 492 aa13.79□□□□□ -0.2
HERPUD1-218ENST00000569569 PROX2Q3B8N5 592 aa13.79□□□□□ -0.2
HERPUD1-218ENST00000569569 RAET1GQ6H3X3 334 aa13.79□□□□□ -0.2
HERPUD1-218ENST00000569569 DARS2Q6PI48 645 aaKnown RBP13.79□□□□□ -0.2
HERPUD1-218ENST00000569569 ZNF765Q7L2R6 523 aa13.79□□□□□ -0.2
HERPUD1-218ENST00000569569 RD3Q7Z3Z2 195 aa13.79□□□□□ -0.2
HERPUD1-218ENST00000569569 HID1Q8IV36 788 aa13.79□□□□□ -0.2
HERPUD1-218ENST00000569569 FAM181AQ8N9Y4 354 aa13.79□□□□□ -0.2
HERPUD1-218ENST00000569569 OR56A4Q8NGH8 313 aa13.79□□□□□ -0.2
HERPUD1-218ENST00000569569 AP2M1Q96CW1 435 aa13.79□□□□□ -0.2
HERPUD1-218ENST00000569569 SRPK1Q96SB4 655 aaKnown RBP13.79□□□□□ -0.2
HERPUD1-218ENST00000569569 LGR4Q9BXB1 951 aa13.79□□□□□ -0.2
HERPUD1-218ENST00000569569 TEX101Q9BY14 249 aa13.79□□□□□ -0.2
HERPUD1-218ENST00000569569 ABCG8Q9H221 673 aa13.79□□□□□ -0.2
HERPUD1-218ENST00000569569 C10orf88Q9H8K7 445 aa13.79□□□□□ -0.2
HERPUD1-218ENST00000569569 MAGEE1Q9HCI5 957 aa13.79□□□□□ -0.2
HERPUD1-218ENST00000569569 LZTFL1Q9NQ48 299 aa13.79□□□□□ -0.2
HERPUD1-218ENST00000569569 PHPT1Q9NRX4 125 aaPredicted RBP13.79□□□□□ -0.2
HERPUD1-218ENST00000569569 GOLGA6AQ9NYA3 693 aa13.79□□□□□ -0.2
HERPUD1-218ENST00000569569 UBP1Q9NZI7 540 aa13.79□□□□□ -0.2
HERPUD1-218ENST00000569569 CD84Q9UIB8 345 aa13.79□□□□□ -0.2
HERPUD1-218ENST00000569569 DGKBQ9Y6T7 804 aa13.79□□□□□ -0.2
HERPUD1-218ENST00000569569 LOC285095A0A1B0GVY8 99 aa13.78□□□□□ -0.2
HERPUD1-218ENST00000569569 RGSL1A5PLK6 1076 aa13.78□□□□□ -0.2
HERPUD1-218ENST00000569569 TMEM202A6NGA9 273 aa13.78□□□□□ -0.2
HERPUD1-218ENST00000569569 GCATO75600 419 aa13.78□□□□□ -0.2
HERPUD1-218ENST00000569569 NDST3O95803 873 aa13.78□□□□□ -0.2
HERPUD1-218ENST00000569569 EPOP01588 193 aa13.78□□□□□ -0.2
HERPUD1-218ENST00000569569 MYCLP1P12525 358 aaPredicted RBP13.78□□□□□ -0.2
HERPUD1-218ENST00000569569 ACP1P24666 158 aa13.78□□□□□ -0.2
HERPUD1-218ENST00000569569 TNNT3P45378 269 aaPredicted RBP13.78□□□□□ -0.2
HERPUD1-218ENST00000569569 GPR1P46091 355 aa13.78□□□□□ -0.2
HERPUD1-218ENST00000569569 SPINT3P49223 89 aa13.78□□□□□ -0.2
HERPUD1-218ENST00000569569 DAB2P98082 770 aa13.78□□□□□ -0.2
HERPUD1-218ENST00000569569 KLF1Q13351 362 aaPredicted RBP13.78□□□□□ -0.2
HERPUD1-218ENST00000569569 MPP3Q13368 585 aa13.78□□□□□ -0.2
HERPUD1-218ENST00000569569 C1orf61Q13536 156 aa13.78□□□□□ -0.2
HERPUD1-218ENST00000569569 ELOCQ15369 112 aa13.78□□□□□ -0.2
HERPUD1-218ENST00000569569 MEI1Q5TIA1 1274 aa13.78□□□□□ -0.2
HERPUD1-218ENST00000569569 ITPRIPL1Q6GPH6 555 aa13.78□□□□□ -0.2
HERPUD1-218ENST00000569569 RFLNAQ6ZTI6 216 aa13.78□□□□□ -0.2
HERPUD1-218ENST00000569569 HEATR4Q86WZ0 1026 aa13.78□□□□□ -0.2
HERPUD1-218ENST00000569569 SDR16C5Q8N3Y7 309 aa13.78□□□□□ -0.2
HERPUD1-218ENST00000569569 FSTL5Q8N475 847 aaPredicted RBP13.78□□□□□ -0.2
HERPUD1-218ENST00000569569 APOLD1Q96LR9 279 aa13.78□□□□□ -0.2
HERPUD1-218ENST00000569569 ALS2CR12Q96Q35 445 aa13.78□□□□□ -0.2
HERPUD1-218ENST00000569569 FAM118BQ9BPY3 351 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms