RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 NADK2Q4G0N4 442 aa8.65□□□□□ -1.02
SMG1-216ENST00000569122 FAM102AQ5T9C2 384 aaPredicted RBP8.65□□□□□ -1.02
SMG1-216ENST00000569122 FOXD4L5Q5VV16 416 aaPredicted RBP8.65□□□□□ -1.02
SMG1-216ENST00000569122 OTUD1Q5VV17 481 aaPredicted RBP8.65□□□□□ -1.02
SMG1-216ENST00000569122 KCTD16Q68DU8 428 aa8.65□□□□□ -1.02
SMG1-216ENST00000569122 LIPIQ6XZB0 460 aa8.65□□□□□ -1.02
SMG1-216ENST00000569122 FAM131BQ86XD5 332 aa8.65□□□□□ -1.02
SMG1-216ENST00000569122 RASGRP3Q8IV61 690 aa8.65□□□□□ -1.02
SMG1-216ENST00000569122 PASD1Q8IV76 773 aa8.65□□□□□ -1.02
SMG1-216ENST00000569122 FOXD4L4Q8WXT5 416 aaPredicted RBP8.65□□□□□ -1.02
SMG1-216ENST00000569122 PNPLA2Q96AD5 504 aa8.65□□□□□ -1.02
SMG1-216ENST00000569122 DHTKD1Q96HY7 919 aaPredicted RBP8.65□□□□□ -1.02
SMG1-216ENST00000569122 LGR4Q9BXB1 951 aa8.65□□□□□ -1.02
SMG1-216ENST00000569122 TEX101Q9BY14 249 aa8.65□□□□□ -1.02
SMG1-216ENST00000569122 MLXIPLQ9NP71 852 aa8.65□□□□□ -1.02
SMG1-216ENST00000569122 SARS2Q9NP81 518 aaKnown RBP8.65□□□□□ -1.02
SMG1-216ENST00000569122 HOOK1Q9UJC3 728 aaKnown RBP8.65□□□□□ -1.02
SMG1-216ENST00000569122 SUFUQ9UMX1 484 aa8.65□□□□□ -1.02
SMG1-216ENST00000569122 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.65□□□□□ -1.02
SMG1-216ENST00000569122 SDK2Q58EX2 2172 aa8.65□□□□□ -1.03
SMG1-216ENST00000569122 CRYBG3Q68DQ2 2970 aa8.64□□□□□ -1.03
SMG1-216ENST00000569122 SPENQ96T58 3664 aaKnown RBP8.64□□□□□ -1.03
SMG1-216ENST00000569122 K7ELQ4 463 aaPredicted RBP8.64□□□□□ -1.03
SMG1-216ENST00000569122 KLHL41O60662 606 aa8.64□□□□□ -1.03
SMG1-216ENST00000569122 ZNF202O95125 648 aa8.64□□□□□ -1.03
SMG1-216ENST00000569122 NDUFA10O95299 355 aa8.64□□□□□ -1.03
SMG1-216ENST00000569122 PIGNO95427 931 aa8.64□□□□□ -1.03
SMG1-216ENST00000569122 FGFR1OPO95684 399 aaKnown RBP8.64□□□□□ -1.03
SMG1-216ENST00000569122 PDGFAP04085 211 aa8.64□□□□□ -1.03
SMG1-216ENST00000569122 PYGLP06737 847 aa8.64□□□□□ -1.03
SMG1-216ENST00000569122 PLEKP08567 350 aaPredicted RBP8.64□□□□□ -1.03
SMG1-216ENST00000569122 TFE3P19532 575 aaPredicted RBP8.64□□□□□ -1.03
SMG1-216ENST00000569122 GRNP28799 593 aaKnown RBP8.64□□□□□ -1.03
SMG1-216ENST00000569122 ADRA1BP35368 520 aa8.64□□□□□ -1.03
SMG1-216ENST00000569122 GABRB2P47870 512 aa8.64□□□□□ -1.03
SMG1-216ENST00000569122 CCL11P51671 97 aa8.64□□□□□ -1.03
SMG1-216ENST00000569122 RPS15P62841 145 aaKnown RBP8.64□□□□□ -1.03
SMG1-216ENST00000569122 HHEXQ03014 270 aa8.64□□□□□ -1.03
SMG1-216ENST00000569122 BCL2L1Q07817 233 aa8.64□□□□□ -1.03
SMG1-216ENST00000569122 DNASE1L3Q13609 305 aa8.64□□□□□ -1.03
SMG1-216ENST00000569122 ZXDCQ2QGD7 858 aaPredicted RBP8.64□□□□□ -1.03
SMG1-216ENST00000569122 PTPN20Q4JDL3 420 aa8.64□□□□□ -1.03
SMG1-216ENST00000569122 JMJD6Q6NYC1 403 aaPredicted RBP8.64□□□□□ -1.03
SMG1-216ENST00000569122 LEKR1Q6ZMV7 388 aa8.64□□□□□ -1.03
SMG1-216ENST00000569122 NYAP1Q6ZVC0 841 aa8.64□□□□□ -1.03
SMG1-216ENST00000569122 DPPA4Q7L190 304 aa8.64□□□□□ -1.03
SMG1-216ENST00000569122 SLC9B2Q86UD5 537 aa8.64□□□□□ -1.03
SMG1-216ENST00000569122 SFRP1Q8N474 314 aa8.64□□□□□ -1.03
SMG1-216ENST00000569122 PATE1Q8WXA2 126 aa8.64□□□□□ -1.03
SMG1-216ENST00000569122 NUS1Q96E22 293 aa8.64□□□□□ -1.03
SMG1-216ENST00000569122 TCTN2Q96GX1 697 aa8.64□□□□□ -1.03
SMG1-216ENST00000569122 SPATA32Q96LK8 384 aa8.64□□□□□ -1.03
SMG1-216ENST00000569122 FRMD8Q9BZ67 464 aaPredicted RBP8.64□□□□□ -1.03
SMG1-216ENST00000569122 ING2Q9H160 280 aa8.64□□□□□ -1.03
SMG1-216ENST00000569122 SUDS3Q9H7L9 328 aaPredicted RBP8.64□□□□□ -1.03
SMG1-216ENST00000569122 APMAPQ9HDC9 416 aa8.64□□□□□ -1.03
SMG1-216ENST00000569122 NDFIP2Q9NV92 336 aa8.64□□□□□ -1.03
SMG1-216ENST00000569122 UBA2Q9UBT2 640 aaPredicted RBP8.64□□□□□ -1.03
SMG1-216ENST00000569122 SLC17A4Q9Y2C5 497 aa8.64□□□□□ -1.03
SMG1-216ENST00000569122 CSMD1Q96PZ7 3565 aa8.63□□□□□ -1.03
SMG1-216ENST00000569122 BICDL2A1A5D9 508 aa8.63□□□□□ -1.03
SMG1-216ENST00000569122 GOLGA6L3A6NEY3 463 aa8.63□□□□□ -1.03
SMG1-216ENST00000569122 ANKUB1A6NFN9 424 aa8.63□□□□□ -1.03
SMG1-216ENST00000569122 OR5K4A6NMS3 321 aa8.63□□□□□ -1.03
SMG1-216ENST00000569122 INSIG1O15503 277 aa8.63□□□□□ -1.03
SMG1-216ENST00000569122 BUB1BO60566 1050 aaPredicted RBP8.63□□□□□ -1.03
SMG1-216ENST00000569122 LRIG2O94898 1065 aa8.63□□□□□ -1.03
SMG1-216ENST00000569122 CBX6O95503 412 aa8.63□□□□□ -1.03
SMG1-216ENST00000569122 HSP90AA1P07900 732 aaKnown RBP8.63□□□□□ -1.03
SMG1-216ENST00000569122 FURINP09958 794 aa8.63□□□□□ -1.03
SMG1-216ENST00000569122 PMS1P54277 932 aaKnown RBP8.63□□□□□ -1.03
SMG1-216ENST00000569122 KRT85P78386 507 aa8.63□□□□□ -1.03
SMG1-216ENST00000569122 CDK3Q00526 305 aa8.63□□□□□ -1.03
SMG1-216ENST00000569122 PDE1BQ01064 536 aa8.63□□□□□ -1.03
SMG1-216ENST00000569122 UGT8Q16880 541 aa8.63□□□□□ -1.03
SMG1-216ENST00000569122 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.63□□□□□ -1.03
SMG1-216ENST00000569122 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.63□□□□□ -1.03
SMG1-216ENST00000569122 ARTNQ5T4W7 220 aa8.63□□□□□ -1.03
SMG1-216ENST00000569122 MANEALQ5VSG8 457 aa8.63□□□□□ -1.03
SMG1-216ENST00000569122 BNIPLQ7Z465 357 aa8.63□□□□□ -1.03
SMG1-216ENST00000569122 SYVN1Q86TM6 617 aa8.63□□□□□ -1.03
SMG1-216ENST00000569122 BPHLQ86WA6 291 aaPredicted RBP8.63□□□□□ -1.03
SMG1-216ENST00000569122 CAMK1DQ8IU85 385 aa8.63□□□□□ -1.03
SMG1-216ENST00000569122 IQCKQ8N0W5 287 aa8.63□□□□□ -1.03
SMG1-216ENST00000569122 RTL3Q8N8U3 475 aaKnown RBP8.63□□□□□ -1.03
SMG1-216ENST00000569122 GALNT6Q8NCL4 622 aa8.63□□□□□ -1.03
SMG1-216ENST00000569122 SLC37A2Q8TED4 501 aa8.63□□□□□ -1.03
SMG1-216ENST00000569122 SCARF2Q96GP6 870 aaPredicted RBP8.63□□□□□ -1.03
SMG1-216ENST00000569122 FCRL4Q96PJ5 515 aa8.63□□□□□ -1.03
SMG1-216ENST00000569122 OR2M4Q96R27 311 aa8.63□□□□□ -1.03
SMG1-216ENST00000569122 HERPUD2Q9BSE4 406 aa8.63□□□□□ -1.03
SMG1-216ENST00000569122 CATSPERBQ9H7T0 1116 aa8.63□□□□□ -1.03
SMG1-216ENST00000569122 ACP6Q9NPH0 428 aa8.63□□□□□ -1.03
SMG1-216ENST00000569122 LNPEPQ9UIQ6 1025 aa8.63□□□□□ -1.03
SMG1-216ENST00000569122 ESPL1Q14674 2120 aa8.63□□□□□ -1.03
SMG1-216ENST00000569122 OTOGQ6ZRI0 2925 aa8.62□□□□□ -1.03
SMG1-216ENST00000569122 KIR2DS5A0A0G2JLQ3 304 aa8.62□□□□□ -1.03
SMG1-216ENST00000569122 A0A0G2JNG1 304 aa8.62□□□□□ -1.03
SMG1-216ENST00000569122 SSU72P8A0A1W2PR75 194 aa8.62□□□□□ -1.03
SMG1-216ENST00000569122 TRIM49BA6NDI0 452 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms