RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 TREX2Q9BQ50 279 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P6-201ENST00000569046 TWSG1Q9GZX9 223 aa3.55□□□□□ -1.84
HMGB1P6-201ENST00000569046 COA1Q9GZY4 146 aa3.55□□□□□ -1.84
HMGB1P6-201ENST00000569046 PAIP1Q9H074 479 aaKnown RBP3.55□□□□□ -1.84
HMGB1P6-201ENST00000569046 ACAD9Q9H845 621 aa3.55□□□□□ -1.84
HMGB1P6-201ENST00000569046 CD209Q9NNX6 404 aa3.55□□□□□ -1.84
HMGB1P6-201ENST00000569046 SAYSD1Q9NPB0 183 aa3.55□□□□□ -1.84
HMGB1P6-201ENST00000569046 PNRC2Q9NPJ4 139 aaKnown RBP3.55□□□□□ -1.84
HMGB1P6-201ENST00000569046 TLR8Q9NR97 1041 aaKnown RBP3.55□□□□□ -1.84
HMGB1P6-201ENST00000569046 SIRT3Q9NTG7 399 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P6-201ENST00000569046 MTMR10Q9NXD2 777 aa3.55□□□□□ -1.84
HMGB1P6-201ENST00000569046 CWC25Q9NXE8 425 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P6-201ENST00000569046 DBF4Q9UBU7 674 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P6-201ENST00000569046 CDK5RAP2Q96SN8 1893 aa3.55□□□□□ -1.84
HMGB1P6-201ENST00000569046 TRIP12Q14669 1992 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P6-201ENST00000569046 TCF20Q9UGU0 1960 aaKnown RBP3.54□□□□□ -1.84
HMGB1P6-201ENST00000569046 DOCK2Q92608 1830 aa3.54□□□□□ -1.84
HMGB1P6-201ENST00000569046 MYO3BQ8WXR4 1341 aa3.54□□□□□ -1.84
HMGB1P6-201ENST00000569046 TSPY2A6NKD2 308 aa3.54□□□□□ -1.84
HMGB1P6-201ENST00000569046 PDHXO00330 501 aa3.54□□□□□ -1.84
HMGB1P6-201ENST00000569046 CHL1O00533 1208 aa3.54□□□□□ -1.84
HMGB1P6-201ENST00000569046 TNFRSF13BO14836 293 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P6-201ENST00000569046 ANP32CO43423 234 aa3.54□□□□□ -1.84
HMGB1P6-201ENST00000569046 DOK2O60496 412 aa3.54□□□□□ -1.84
HMGB1P6-201ENST00000569046 PCCAP05165 728 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P6-201ENST00000569046 LCKP06239 509 aa3.54□□□□□ -1.84
HMGB1P6-201ENST00000569046 IGKV5-2P06315 115 aa3.54□□□□□ -1.84
HMGB1P6-201ENST00000569046 TSPY3P0CV98 308 aa3.54□□□□□ -1.84
HMGB1P6-201ENST00000569046 TSPY8P0CW00 308 aa3.54□□□□□ -1.84
HMGB1P6-201ENST00000569046 FCGR2AP12318 317 aa3.54□□□□□ -1.84
HMGB1P6-201ENST00000569046 AKR1B1P15121 316 aa3.54□□□□□ -1.84
HMGB1P6-201ENST00000569046 ARSAP15289 507 aa3.54□□□□□ -1.84
HMGB1P6-201ENST00000569046 TBXAS1P24557 533 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P6-201ENST00000569046 GSTM2P28161 218 aa3.54□□□□□ -1.84
HMGB1P6-201ENST00000569046 HOXA11P31270 313 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P6-201ENST00000569046 ARRB2P32121 409 aa3.54□□□□□ -1.84
HMGB1P6-201ENST00000569046 TNFSF8P32971 234 aa3.54□□□□□ -1.84
HMGB1P6-201ENST00000569046 SLC16A2P36021 539 aa3.54□□□□□ -1.84
HMGB1P6-201ENST00000569046 GYG1P46976 350 aa3.54□□□□□ -1.84
HMGB1P6-201ENST00000569046 THBS3P49746 956 aa3.54□□□□□ -1.84
HMGB1P6-201ENST00000569046 DRG2P55039 364 aaKnown RBP3.54□□□□□ -1.84
HMGB1P6-201ENST00000569046 TSPY1Q01534 308 aa3.54□□□□□ -1.84
HMGB1P6-201ENST00000569046 UBE3AQ05086 875 aa3.54□□□□□ -1.84
HMGB1P6-201ENST00000569046 CHRNDQ07001 517 aa3.54□□□□□ -1.84
HMGB1P6-201ENST00000569046 SLC12A1Q13621 1099 aa3.54□□□□□ -1.84
HMGB1P6-201ENST00000569046 WASHC2DQ5SRD0 308 aa3.54□□□□□ -1.84
HMGB1P6-201ENST00000569046 FAM171A1Q5VUB5 890 aa3.54□□□□□ -1.84
HMGB1P6-201ENST00000569046 HAUS3Q68CZ6 603 aa3.54□□□□□ -1.84
HMGB1P6-201ENST00000569046 C17orf99Q6UX52 265 aa3.54□□□□□ -1.84
HMGB1P6-201ENST00000569046 G2E3Q7L622 706 aa3.54□□□□□ -1.84
HMGB1P6-201ENST00000569046 TSPYL6Q8N831 410 aa3.54□□□□□ -1.84
HMGB1P6-201ENST00000569046 NKAIN3Q8N8D7 197 aa3.54□□□□□ -1.84
HMGB1P6-201ENST00000569046 ENGASEQ8NFI3 743 aa3.54□□□□□ -1.84
HMGB1P6-201ENST00000569046 LINS1Q8NG48 757 aa3.54□□□□□ -1.84
HMGB1P6-201ENST00000569046 TDRD7Q8NHU6 1098 aaKnown RBP3.54□□□□□ -1.84
HMGB1P6-201ENST00000569046 ST8SIA4Q92187 359 aa3.54□□□□□ -1.84
HMGB1P6-201ENST00000569046 LPAR1Q92633 364 aa3.54□□□□□ -1.84
HMGB1P6-201ENST00000569046 URB1-AS1Q96HZ7 61 aa3.54□□□□□ -1.84
HMGB1P6-201ENST00000569046 WDR77Q9BQA1 342 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P6-201ENST00000569046 POLDIP3Q9BY77 421 aaKnown RBP3.54□□□□□ -1.84
HMGB1P6-201ENST00000569046 ISCUQ9H1K1 167 aa3.54□□□□□ -1.84
HMGB1P6-201ENST00000569046 HIPK3Q9H422 1215 aa3.54□□□□□ -1.84
HMGB1P6-201ENST00000569046 CHODLQ9H9P2 273 aa3.54□□□□□ -1.84
HMGB1P6-201ENST00000569046 THAP1Q9NVV9 213 aa3.54□□□□□ -1.84
HMGB1P6-201ENST00000569046 HYPKQ9NX55 129 aa3.54□□□□□ -1.84
HMGB1P6-201ENST00000569046 NSMCE4AQ9NXX6 385 aa3.54□□□□□ -1.84
HMGB1P6-201ENST00000569046 TBC1D14Q9P2M4 693 aa3.54□□□□□ -1.84
HMGB1P6-201ENST00000569046 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P6-201ENST00000569046 ORC3Q9UBD5 711 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P6-201ENST00000569046 PLEKHB1Q9UF11 243 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P6-201ENST00000569046 ARHGAP26Q9UNA1 814 aa3.54□□□□□ -1.84
HMGB1P6-201ENST00000569046 UNC80Q8N2C7 3258 aa3.53□□□□□ -1.84
HMGB1P6-201ENST00000569046 MYH2Q9UKX2 1941 aa3.53□□□□□ -1.84
HMGB1P6-201ENST00000569046 PI4KAP2A4QPH2 592 aa3.53□□□□□ -1.84
HMGB1P6-201ENST00000569046 BECN2A8MW95 431 aa3.53□□□□□ -1.84
HMGB1P6-201ENST00000569046 PROB1E7EW31 1015 aa3.53□□□□□ -1.84
HMGB1P6-201ENST00000569046 SYN3O14994 580 aa3.53□□□□□ -1.84
HMGB1P6-201ENST00000569046 ZBED4O75132 1171 aa3.53□□□□□ -1.84
HMGB1P6-201ENST00000569046 RTN3O95197 1032 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P6-201ENST00000569046 HNRNPA1P09651 372 aaKnown RBP eCLIP3.53□□□□□ -1.84
HMGB1P6-201ENST00000569046 ITGB6P18564 788 aa3.53□□□□□ -1.84
HMGB1P6-201ENST00000569046 RXRAP19793 462 aa3.53□□□□□ -1.84
HMGB1P6-201ENST00000569046 PNPLA4P41247 253 aa3.53□□□□□ -1.84
HMGB1P6-201ENST00000569046 RFX5P48382 616 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P6-201ENST00000569046 CYP2J2P51589 502 aa3.53□□□□□ -1.84
HMGB1P6-201ENST00000569046 OAZ1P54368 228 aa3.53□□□□□ -1.84
HMGB1P6-201ENST00000569046 NAP1L1P55209 391 aaKnown RBP3.53□□□□□ -1.84
HMGB1P6-201ENST00000569046 CASP6P55212 293 aa3.53□□□□□ -1.84
HMGB1P6-201ENST00000569046 TMPRSS3P57727 454 aa3.53□□□□□ -1.84
HMGB1P6-201ENST00000569046 TCP10Q12799 353 aa3.53□□□□□ -1.84
HMGB1P6-201ENST00000569046 TRAF1Q13077 416 aa3.53□□□□□ -1.84
HMGB1P6-201ENST00000569046 ERV3-1Q14264 604 aa3.53□□□□□ -1.84
HMGB1P6-201ENST00000569046 ARHGEF6Q15052 776 aa3.53□□□□□ -1.84
HMGB1P6-201ENST00000569046 TSTQ16762 297 aaKnown RBP3.53□□□□□ -1.84
HMGB1P6-201ENST00000569046 C5orf22Q49AR2 442 aa3.53□□□□□ -1.84
HMGB1P6-201ENST00000569046 Q5PR19 223 aa3.53□□□□□ -1.84
HMGB1P6-201ENST00000569046 MAP3K21Q5TCX8 1036 aa3.53□□□□□ -1.84
HMGB1P6-201ENST00000569046 TMEM71Q6P5X7 295 aa3.53□□□□□ -1.84
HMGB1P6-201ENST00000569046 PARM1Q6UWI2 310 aa3.53□□□□□ -1.84
HMGB1P6-201ENST00000569046 TMCO3Q6UWJ1 677 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms