RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 TFDP2Q14188 446 aa29.35■■■□□ 2.29
RAB40C-211ENST00000568586 ODF2Q5BJF6 829 aa29.35■■■□□ 2.29
RAB40C-211ENST00000568586 BZW1Q7L1Q6 419 aaKnown RBP29.35■■■□□ 2.29
RAB40C-211ENST00000568586 EFL1Q7Z2Z2 1120 aaKnown RBP29.35■■■□□ 2.29
RAB40C-211ENST00000568586 RD3Q7Z3Z2 195 aa29.35■■■□□ 2.29
RAB40C-211ENST00000568586 NAT6Q93015 286 aa29.35■■■□□ 2.29
RAB40C-211ENST00000568586 TADA1Q96BN2 335 aa29.35■■■□□ 2.29
RAB40C-211ENST00000568586 NXPE2Q96DL1 559 aa29.35■■■□□ 2.29
RAB40C-211ENST00000568586 GOLPH3Q9H4A6 298 aa29.35■■■□□ 2.29
RAB40C-211ENST00000568586 PHPT1Q9NRX4 125 aaPredicted RBP29.35■■■□□ 2.29
RAB40C-211ENST00000568586 TFR2Q9UP52 801 aa29.35■■■□□ 2.29
RAB40C-211ENST00000568586 TNNT1P13805 278 aa29.34■■■□□ 2.29
RAB40C-211ENST00000568586 EPHB1P54762 984 aa29.34■■■□□ 2.29
RAB40C-211ENST00000568586 AP1B1Q10567 949 aa29.34■■■□□ 2.29
RAB40C-211ENST00000568586 SLC14A2Q15849 920 aa29.34■■■□□ 2.29
RAB40C-211ENST00000568586 DENND2CQ68D51 928 aa29.34■■■□□ 2.29
RAB40C-211ENST00000568586 SPOCD1Q6ZMY3 1216 aa29.34■■■□□ 2.29
RAB40C-211ENST00000568586 HEATR4Q86WZ0 1026 aa29.34■■■□□ 2.29
RAB40C-211ENST00000568586 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP29.34■■■□□ 2.29
RAB40C-211ENST00000568586 ARL10Q8N8L6 244 aa29.34■■■□□ 2.29
RAB40C-211ENST00000568586 IMP4Q96G21 291 aaKnown RBP29.34■■■□□ 2.29
RAB40C-211ENST00000568586 FRMD8Q9BZ67 464 aaPredicted RBP29.34■■■□□ 2.29
RAB40C-211ENST00000568586 ABCG8Q9H221 673 aa29.34■■■□□ 2.29
RAB40C-211ENST00000568586 MRPL40Q9NQ50 206 aaKnown RBP29.34■■■□□ 2.29
RAB40C-211ENST00000568586 PADI4Q9UM07 663 aa29.34■■■□□ 2.29
RAB40C-211ENST00000568586 CPED1A4D0V7 1026 aa29.33■■■□□ 2.29
RAB40C-211ENST00000568586 RCCD1A6NED2 376 aa29.33■■■□□ 2.29
RAB40C-211ENST00000568586 SOWAHDA6NJG2 315 aa29.33■■■□□ 2.29
RAB40C-211ENST00000568586 ANKRD66B4E2M5 251 aa29.33■■■□□ 2.29
RAB40C-211ENST00000568586 ZRANB2O95218 330 aaKnown RBP eCLIP29.33■■■□□ 2.292e-6■■■□□ 16.1
RAB40C-211ENST00000568586 SOD1P00441 154 aa29.33■■■□□ 2.29
RAB40C-211ENST00000568586 CEACAM5P06731 702 aa29.33■■■□□ 2.29
RAB40C-211ENST00000568586 CD86P42081 329 aa29.33■■■□□ 2.29
RAB40C-211ENST00000568586 CDK3Q00526 305 aa29.33■■■□□ 2.29
RAB40C-211ENST00000568586 PRKD1Q15139 912 aaPredicted RBP29.33■■■□□ 2.29
RAB40C-211ENST00000568586 OGFOD3Q6PK18 319 aa29.33■■■□□ 2.29
RAB40C-211ENST00000568586 ADAMTSL4Q6UY14 1074 aa29.33■■■□□ 2.29
RAB40C-211ENST00000568586 RCOR2Q8IZ40 523 aa29.33■■■□□ 2.29
RAB40C-211ENST00000568586 NRSN1Q8IZ57 195 aa29.33■■■□□ 2.29
RAB40C-211ENST00000568586 MAPK15Q8TD08 544 aa29.33■■■□□ 2.29
RAB40C-211ENST00000568586 DOLKQ9UPQ8 538 aa29.33■■■□□ 2.29
RAB40C-211ENST00000568586 ZFYVE26Q68DK2 2539 aa29.32■■■□□ 2.28
RAB40C-211ENST00000568586 URB1O60287 2271 aaKnown RBP29.32■■■□□ 2.28
RAB40C-211ENST00000568586 A0A0U1RQS6 177 aa29.32■■■□□ 2.28
RAB40C-211ENST00000568586 PRSS38A1L453 326 aa29.32■■■□□ 2.28
RAB40C-211ENST00000568586 BTNL10A8MVZ5 291 aa29.32■■■□□ 2.28
RAB40C-211ENST00000568586 TGM2P21980 687 aa29.32■■■□□ 2.28
RAB40C-211ENST00000568586 QPCTQ16769 361 aa29.32■■■□□ 2.28
RAB40C-211ENST00000568586 TFDP3Q5H9I0 405 aa29.32■■■□□ 2.28
RAB40C-211ENST00000568586 RFLNAQ6ZTI6 216 aa29.32■■■□□ 2.28
RAB40C-211ENST00000568586 EXD1Q8NHP7 514 aa29.32■■■□□ 2.28
RAB40C-211ENST00000568586 TRIB3Q96RU7 358 aa29.32■■■□□ 2.28
RAB40C-211ENST00000568586 ABCG4Q9H172 646 aa29.32■■■□□ 2.28
RAB40C-211ENST00000568586 SLC25A51Q9H1U9 297 aa29.32■■■□□ 2.28
RAB40C-211ENST00000568586 SLC17A4Q9Y2C5 497 aa29.32■■■□□ 2.28
RAB40C-211ENST00000568586 REXO2Q9Y3B8 237 aaKnown RBP29.32■■■□□ 2.28
RAB40C-211ENST00000568586 RP1P56715 2156 aa29.32■■■□□ 2.28
RAB40C-211ENST00000568586 CST8O60676 142 aa29.31■■■□□ 2.28
RAB40C-211ENST00000568586 FUCA1P04066 466 aa29.31■■■□□ 2.28
RAB40C-211ENST00000568586 DYNLT1P63172 113 aa29.31■■■□□ 2.28
RAB40C-211ENST00000568586 ADCY2Q08462 1091 aa29.31■■■□□ 2.28
RAB40C-211ENST00000568586 TEX44Q53QW1 395 aa29.31■■■□□ 2.28
RAB40C-211ENST00000568586 PERM1Q5SV97 790 aa29.31■■■□□ 2.28
RAB40C-211ENST00000568586 LPCAT1Q8NF37 534 aa29.31■■■□□ 2.28
RAB40C-211ENST00000568586 GPR156Q8NFN8 814 aa29.31■■■□□ 2.28
RAB40C-211ENST00000568586 WDR48Q8TAF3 677 aa29.31■■■□□ 2.28
RAB40C-211ENST00000568586 SCARF2Q96GP6 870 aaPredicted RBP29.31■■■□□ 2.28
RAB40C-211ENST00000568586 DEPDC7Q96QD5 511 aa29.31■■■□□ 2.28
RAB40C-211ENST00000568586 ADGRE3Q9BY15 652 aa29.31■■■□□ 2.28
RAB40C-211ENST00000568586 TMEM168Q9H0V1 697 aa29.31■■■□□ 2.28
RAB40C-211ENST00000568586 CYP4F12Q9HCS2 524 aa29.31■■■□□ 2.28
RAB40C-211ENST00000568586 GPR34Q9UPC5 381 aa29.31■■■□□ 2.28
RAB40C-211ENST00000568586 FAM208BQ5VWN6 2430 aa29.31■■■□□ 2.28
RAB40C-211ENST00000568586 hCG_1818297A0A087WSY0 165 aa29.3■■■□□ 2.28
RAB40C-211ENST00000568586 PYGLP06737 847 aa29.3■■■□□ 2.28
RAB40C-211ENST00000568586 MARCKSL1P49006 195 aa29.3■■■□□ 2.28
RAB40C-211ENST00000568586 RAET1GQ6H3X3 334 aa29.3■■■□□ 2.28
RAB40C-211ENST00000568586 RAD9BQ6WBX8 426 aa29.3■■■□□ 2.28
RAB40C-211ENST00000568586 NT5DC3Q86UY8 548 aa29.3■■■□□ 2.28
RAB40C-211ENST00000568586 KYQ8NBH2 561 aa29.3■■■□□ 2.28
RAB40C-211ENST00000568586 GPBAR1Q8TDU6 330 aa29.3■■■□□ 2.28
RAB40C-211ENST00000568586 GRAMD1AQ96CP6 724 aa29.3■■■□□ 2.28
RAB40C-211ENST00000568586 AP2M1Q96CW1 435 aa29.3■■■□□ 2.28
RAB40C-211ENST00000568586 TRNAU1APQ9NX07 287 aaKnown RBP29.3■■■□□ 2.28
RAB40C-211ENST00000568586 SAE1Q9UBE0 346 aaPredicted RBP29.3■■■□□ 2.28
RAB40C-211ENST00000568586 SBDSQ9Y3A5 250 aaKnown RBP eCLIP29.3■■■□□ 2.28
RAB40C-211ENST00000568586 RGSL1A5PLK6 1076 aa29.29■■■□□ 2.28
RAB40C-211ENST00000568586 TCEA3O75764 348 aa29.29■■■□□ 2.28
RAB40C-211ENST00000568586 CLDN7O95471 211 aa29.29■■■□□ 2.28
RAB40C-211ENST00000568586 PECAM1P16284 738 aaPredicted RBP29.29■■■□□ 2.28
RAB40C-211ENST00000568586 PPP2R5EQ16537 467 aa29.29■■■□□ 2.28
RAB40C-211ENST00000568586 OR6C4Q8NGE1 309 aa29.29■■■□□ 2.28
RAB40C-211ENST00000568586 KRT35Q92764 455 aa29.29■■■□□ 2.28
RAB40C-211ENST00000568586 SCAMP4Q969E2 229 aa29.29■■■□□ 2.28
RAB40C-211ENST00000568586 RBM41Q96IZ5 413 aaKnown RBP29.29■■■□□ 2.28
RAB40C-211ENST00000568586 TEKT5Q96M29 485 aa29.29■■■□□ 2.28
RAB40C-211ENST00000568586 AGAP3Q96P47 875 aa29.29■■■□□ 2.28
RAB40C-211ENST00000568586 MLPHQ9BV36 600 aaPredicted RBP29.29■■■□□ 2.28
RAB40C-211ENST00000568586 CEP41Q9BYV8 373 aa29.29■■■□□ 2.28
RAB40C-211ENST00000568586 RAXQ9Y2V3 346 aa29.29■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms