RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 ACTR1BP42025 376 aa11.78□□□□□ -0.52
GTF3C1-209ENST00000568569 NOP2P46087 812 aaKnown RBP11.78□□□□□ -0.52
GTF3C1-209ENST00000568569 PPM1FP49593 454 aaPredicted RBP11.78□□□□□ -0.52
GTF3C1-209ENST00000568569 COPB1P53618 953 aaKnown RBP11.78□□□□□ -0.52
GTF3C1-209ENST00000568569 AIF1P55008 147 aa11.78□□□□□ -0.52
GTF3C1-209ENST00000568569 GSCP56915 257 aaPredicted RBP11.78□□□□□ -0.52
GTF3C1-209ENST00000568569 TPI1P60174 286 aa11.78□□□□□ -0.52
GTF3C1-209ENST00000568569 ACTR1AP61163 376 aa11.78□□□□□ -0.52
GTF3C1-209ENST00000568569 CDK3Q00526 305 aa11.78□□□□□ -0.52
GTF3C1-209ENST00000568569 CTBSQ01459 385 aa11.78□□□□□ -0.52
GTF3C1-209ENST00000568569 MC2RQ01718 297 aa11.78□□□□□ -0.52
GTF3C1-209ENST00000568569 CDR2Q01850 454 aa11.78□□□□□ -0.52
GTF3C1-209ENST00000568569 MIIPQ5JXC2 388 aa11.78□□□□□ -0.52
GTF3C1-209ENST00000568569 TRIM72Q6ZMU5 477 aa11.78□□□□□ -0.52
GTF3C1-209ENST00000568569 KDELC2Q7Z4H8 507 aa11.78□□□□□ -0.52
GTF3C1-209ENST00000568569 UNC5BQ8IZJ1 945 aa11.78□□□□□ -0.52
GTF3C1-209ENST00000568569 TEX19Q8NA77 164 aa11.78□□□□□ -0.52
GTF3C1-209ENST00000568569 OR10G6Q8NH81 332 aa11.78□□□□□ -0.52
GTF3C1-209ENST00000568569 SLC30A5Q8TAD4 765 aa11.78□□□□□ -0.52
GTF3C1-209ENST00000568569 SLC20A1Q8WUM9 679 aa11.78□□□□□ -0.52
GTF3C1-209ENST00000568569 COQ10AQ96MF6 247 aa11.78□□□□□ -0.52
GTF3C1-209ENST00000568569 TUBGCP2Q9BSJ2 902 aa11.78□□□□□ -0.52
GTF3C1-209ENST00000568569 SELENOOQ9BVL4 669 aa11.78□□□□□ -0.52
GTF3C1-209ENST00000568569 SPRY4Q9C004 299 aa11.78□□□□□ -0.52
GTF3C1-209ENST00000568569 B4GALT6Q9UBX8 382 aa11.78□□□□□ -0.52
GTF3C1-209ENST00000568569 TP53TG5Q9Y2B4 290 aa11.78□□□□□ -0.52
GTF3C1-209ENST00000568569 SLC17A4Q9Y2C5 497 aa11.78□□□□□ -0.52
GTF3C1-209ENST00000568569 KCTD3Q9Y597 815 aa11.78□□□□□ -0.52
GTF3C1-209ENST00000568569 ST14Q9Y5Y6 855 aa11.78□□□□□ -0.52
GTF3C1-209ENST00000568569 UTP20O75691 2785 aaKnown RBP11.78□□□□□ -0.52
GTF3C1-209ENST00000568569 ARHGAP42A6NI28 874 aa11.77□□□□□ -0.53
GTF3C1-209ENST00000568569 PES1O00541 588 aaKnown RBP11.77□□□□□ -0.53
GTF3C1-209ENST00000568569 STK17BO94768 372 aa11.77□□□□□ -0.53
GTF3C1-209ENST00000568569 IVLP07476 585 aa11.77□□□□□ -0.53
GTF3C1-209ENST00000568569 FASLGP48023 281 aa11.77□□□□□ -0.53
GTF3C1-209ENST00000568569 PAPOLAP51003 745 aaKnown RBP11.77□□□□□ -0.53
GTF3C1-209ENST00000568569 AP1S1P61966 158 aa11.77□□□□□ -0.53
GTF3C1-209ENST00000568569 FMO1Q01740 532 aa11.77□□□□□ -0.53
GTF3C1-209ENST00000568569 NSUN2Q08J23 767 aaKnown RBP eCLIP11.77□□□□□ -0.53
GTF3C1-209ENST00000568569 PTP4A2Q12974 167 aa11.77□□□□□ -0.53
GTF3C1-209ENST00000568569 RFTN1Q14699 578 aaPredicted RBP11.77□□□□□ -0.53
GTF3C1-209ENST00000568569 CNGA3Q16281 694 aa11.77□□□□□ -0.53
GTF3C1-209ENST00000568569 C16orf46Q6P387 395 aa11.77□□□□□ -0.53
GTF3C1-209ENST00000568569 WDR59Q6PJI9 974 aa11.77□□□□□ -0.53
GTF3C1-209ENST00000568569 C3orf20Q8ND61 904 aa11.77□□□□□ -0.53
GTF3C1-209ENST00000568569 PTCD2Q8WV60 388 aaKnown RBP11.77□□□□□ -0.53
GTF3C1-209ENST00000568569 SPOCK2Q92563 424 aa11.77□□□□□ -0.53
GTF3C1-209ENST00000568569 DTD2Q96FN9 168 aa11.77□□□□□ -0.53
GTF3C1-209ENST00000568569 CELF6Q96J87 481 aaKnown RBP11.77□□□□□ -0.53
GTF3C1-209ENST00000568569 SLC38A3Q99624 504 aa11.77□□□□□ -0.53
GTF3C1-209ENST00000568569 CTRCQ99895 268 aa11.77□□□□□ -0.53
GTF3C1-209ENST00000568569 SP110Q9HB58 689 aa11.77□□□□□ -0.53
GTF3C1-209ENST00000568569 FBXO8Q9NRD0 319 aa11.77□□□□□ -0.53
GTF3C1-209ENST00000568569 KIAA1468Q9P260 1216 aa11.77□□□□□ -0.53
GTF3C1-209ENST00000568569 PLEKHB1Q9UF11 243 aaPredicted RBP11.77□□□□□ -0.53
GTF3C1-209ENST00000568569 FZD10Q9ULW2 581 aa11.77□□□□□ -0.53
GTF3C1-209ENST00000568569 TMEM184BQ9Y519 407 aaPredicted RBP11.77□□□□□ -0.53
GTF3C1-209ENST00000568569 A0A1W2PQ67 120 aa11.76□□□□□ -0.53
GTF3C1-209ENST00000568569 ANKRD62A6NC57 917 aa11.76□□□□□ -0.53
GTF3C1-209ENST00000568569 GOLGA6CA6NDK9 693 aa11.76□□□□□ -0.53
GTF3C1-209ENST00000568569 GOLGA6BA6NDN3 693 aa11.76□□□□□ -0.53
GTF3C1-209ENST00000568569 MKRN2OSH3BPM6 223 aa11.76□□□□□ -0.53
GTF3C1-209ENST00000568569 CCP110O43303 1012 aa11.76□□□□□ -0.53
GTF3C1-209ENST00000568569 GFPT2O94808 682 aa11.76□□□□□ -0.53
GTF3C1-209ENST00000568569 HEXIM1O94992 359 aaKnown RBP11.76□□□□□ -0.53
GTF3C1-209ENST00000568569 KRT7P08729 469 aa11.76□□□□□ -0.53
GTF3C1-209ENST00000568569 GOLGA6DP0CG33 693 aa11.76□□□□□ -0.53
GTF3C1-209ENST00000568569 NFKBIAP25963 317 aa11.76□□□□□ -0.53
GTF3C1-209ENST00000568569 TEAD1P28347 426 aa11.76□□□□□ -0.53
GTF3C1-209ENST00000568569 STAT5AP42229 794 aa11.76□□□□□ -0.53
GTF3C1-209ENST00000568569 NSFP46459 744 aaKnown RBP11.76□□□□□ -0.53
GTF3C1-209ENST00000568569 SCNN1BP51168 640 aa11.76□□□□□ -0.53
GTF3C1-209ENST00000568569 ZNF143P52747 638 aaPredicted RBP11.76□□□□□ -0.53
GTF3C1-209ENST00000568569 MLLT10P55197 1068 aa11.76□□□□□ -0.53
GTF3C1-209ENST00000568569 SNAP47Q5SQN1 464 aa11.76□□□□□ -0.53
GTF3C1-209ENST00000568569 ATP1A1-AS1Q5TC04 95 aa11.76□□□□□ -0.53
GTF3C1-209ENST00000568569 HIST2H2BCQ6DN03 193 aa11.76□□□□□ -0.53
GTF3C1-209ENST00000568569 RAET1GQ6H3X3 334 aa11.76□□□□□ -0.53
GTF3C1-209ENST00000568569 TCTN3Q6NUS6 607 aa11.76□□□□□ -0.53
GTF3C1-209ENST00000568569 WDR74Q6RFH5 385 aaPredicted RBP11.76□□□□□ -0.53
GTF3C1-209ENST00000568569 TIPARPQ7Z3E1 657 aaKnown RBP11.76□□□□□ -0.53
GTF3C1-209ENST00000568569 ARHGAP22Q7Z5H3 698 aa11.76□□□□□ -0.53
GTF3C1-209ENST00000568569 ESX1Q8N693 406 aa11.76□□□□□ -0.53
GTF3C1-209ENST00000568569 MLKLQ8NB16 471 aa11.76□□□□□ -0.53
GTF3C1-209ENST00000568569 SLC37A2Q8TED4 501 aa11.76□□□□□ -0.53
GTF3C1-209ENST00000568569 OR2M4Q96R27 311 aa11.76□□□□□ -0.53
GTF3C1-209ENST00000568569 SLC39A8Q9C0K1 460 aa11.76□□□□□ -0.53
GTF3C1-209ENST00000568569 GOLGA6AQ9NYA3 693 aa11.76□□□□□ -0.53
GTF3C1-209ENST00000568569 ADAM22Q9P0K1 906 aa11.76□□□□□ -0.53
GTF3C1-209ENST00000568569 KCNMB2Q9Y691 235 aa11.76□□□□□ -0.53
GTF3C1-209ENST00000568569 ANKRD36A6QL64 1941 aa11.76□□□□□ -0.53
GTF3C1-209ENST00000568569 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.75□□□□□ -0.53
GTF3C1-209ENST00000568569 SIGLEC16A6NMB1 481 aa11.75□□□□□ -0.53
GTF3C1-209ENST00000568569 ENO4A6NNW6 628 aa11.75□□□□□ -0.53
GTF3C1-209ENST00000568569 A8MU76 341 aa11.75□□□□□ -0.53
GTF3C1-209ENST00000568569 PSMD11O00231 422 aa11.75□□□□□ -0.53
GTF3C1-209ENST00000568569 POLR1CO15160 346 aaPredicted RBP11.75□□□□□ -0.53
GTF3C1-209ENST00000568569 SOCS5O75159 536 aa11.75□□□□□ -0.53
GTF3C1-209ENST00000568569 VPS4BO75351 444 aa11.75□□□□□ -0.53
GTF3C1-209ENST00000568569 AGFG2O95081 481 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms