RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 FNIP1Q8TF40 1166 aa15.47■□□□□ 0.07
PALB2-205ENST00000567003 RNF25Q96BH1 459 aaPredicted RBP15.47■□□□□ 0.07
PALB2-205ENST00000567003 RNF31Q96EP0 1072 aa15.47■□□□□ 0.07
PALB2-205ENST00000567003 PEBP4Q96S96 227 aa15.47■□□□□ 0.07
PALB2-205ENST00000567003 KCTD15Q96SI1 283 aaPredicted RBP15.47■□□□□ 0.07
PALB2-205ENST00000567003 CNPY3Q9BT09 278 aa15.47■□□□□ 0.07
PALB2-205ENST00000567003 ZMYND15Q9H091 742 aa15.47■□□□□ 0.07
PALB2-205ENST00000567003 CLSTN2Q9H4D0 955 aa15.47■□□□□ 0.07
PALB2-205ENST00000567003 DHX35Q9H5Z1 703 aaKnown RBP15.47■□□□□ 0.07
PALB2-205ENST00000567003 PHPT1Q9NRX4 125 aaPredicted RBP15.47■□□□□ 0.07
PALB2-205ENST00000567003 SEPT3Q9UH03 358 aa15.47■□□□□ 0.07
PALB2-205ENST00000567003 AP4E1Q9UPM8 1137 aa15.47■□□□□ 0.07
PALB2-205ENST00000567003 TRBV23OR9-2A0A075B6M9 112 aa15.46■□□□□ 0.07
PALB2-205ENST00000567003 TNFAIP3P21580 790 aa15.46■□□□□ 0.07
PALB2-205ENST00000567003 ERCC5P28715 1186 aaPredicted RBP15.46■□□□□ 0.07
PALB2-205ENST00000567003 CSTF2P33240 577 aaKnown RBP eCLIP15.46■□□□□ 0.07
PALB2-205ENST00000567003 ADCY8P40145 1251 aa15.46■□□□□ 0.07
PALB2-205ENST00000567003 CCR10P46092 362 aa15.46■□□□□ 0.07
PALB2-205ENST00000567003 FOXK1P85037 733 aa15.46■□□□□ 0.07
PALB2-205ENST00000567003 CDK3Q00526 305 aa15.46■□□□□ 0.07
PALB2-205ENST00000567003 KRT31Q15323 416 aa15.46■□□□□ 0.07
PALB2-205ENST00000567003 SNAP47Q5SQN1 464 aa15.46■□□□□ 0.07
PALB2-205ENST00000567003 RFLNAQ6ZTI6 216 aa15.46■□□□□ 0.07
PALB2-205ENST00000567003 NRSN1Q8IZ57 195 aa15.46■□□□□ 0.07
PALB2-205ENST00000567003 UNC5BQ8IZJ1 945 aa15.46■□□□□ 0.07
PALB2-205ENST00000567003 AGBL5Q8NDL9 886 aa15.46■□□□□ 0.07
PALB2-205ENST00000567003 OR4D9Q8NGE8 314 aa15.46■□□□□ 0.07
PALB2-205ENST00000567003 PDCD6IPQ8WUM4 868 aaKnown RBP15.46■□□□□ 0.07
PALB2-205ENST00000567003 CTRCQ99895 268 aa15.46■□□□□ 0.07
PALB2-205ENST00000567003 TEX101Q9BY14 249 aa15.46■□□□□ 0.07
PALB2-205ENST00000567003 CDH19Q9H159 772 aa15.46■□□□□ 0.07
PALB2-205ENST00000567003 PCDHGC4Q9Y5F7 938 aa15.46■□□□□ 0.07
PALB2-205ENST00000567003 ANKRD62A6NC57 917 aa15.45■□□□□ 0.06
PALB2-205ENST00000567003 ZNF891A8MT65 544 aaPredicted RBP15.45■□□□□ 0.06
PALB2-205ENST00000567003 A8MU76 341 aa15.45■□□□□ 0.06
PALB2-205ENST00000567003 PDE2AO00408 941 aaPredicted RBP15.45■□□□□ 0.06
PALB2-205ENST00000567003 ATMINO43313 823 aaPredicted RBP15.45■□□□□ 0.06
PALB2-205ENST00000567003 HEXIM1O94992 359 aaKnown RBP15.45■□□□□ 0.06
PALB2-205ENST00000567003 ERCC2P18074 760 aa15.45■□□□□ 0.06
PALB2-205ENST00000567003 LHCGRP22888 699 aa15.45■□□□□ 0.06
PALB2-205ENST00000567003 EEF1GP26641 437 aaKnown RBP15.45■□□□□ 0.06
PALB2-205ENST00000567003 VIPR1P32241 457 aa15.45■□□□□ 0.06
PALB2-205ENST00000567003 CASRP41180 1078 aa15.45■□□□□ 0.06
PALB2-205ENST00000567003 ACTR1BP42025 376 aa15.45■□□□□ 0.06
PALB2-205ENST00000567003 GPR3P46089 330 aa15.45■□□□□ 0.06
PALB2-205ENST00000567003 PPM1FP49593 454 aaPredicted RBP15.45■□□□□ 0.06
PALB2-205ENST00000567003 ACTR1AP61163 376 aa15.45■□□□□ 0.06
PALB2-205ENST00000567003 SLC10A7Q0GE19 358 aa15.45■□□□□ 0.06
PALB2-205ENST00000567003 TRA2AQ13595 282 aaKnown RBP eCLIP15.45■□□□□ 0.06
PALB2-205ENST00000567003 ATP1A1-AS1Q5TC04 95 aa15.45■□□□□ 0.06
PALB2-205ENST00000567003 RAET1GQ6H3X3 334 aa15.45■□□□□ 0.06
PALB2-205ENST00000567003 DCUN1D2Q6PH85 259 aa15.45■□□□□ 0.06
PALB2-205ENST00000567003 TSPAN33Q86UF1 283 aa15.45■□□□□ 0.06
PALB2-205ENST00000567003 TRIM74Q86UV6 250 aa15.45■□□□□ 0.06
PALB2-205ENST00000567003 CCDC112Q8NEF3 446 aa15.45■□□□□ 0.06
PALB2-205ENST00000567003 DTD2Q96FN9 168 aa15.45■□□□□ 0.06
PALB2-205ENST00000567003 SMIM14Q96QK8 99 aa15.45■□□□□ 0.06
PALB2-205ENST00000567003 SNRNP25Q9BV90 132 aaKnown RBP15.45■□□□□ 0.06
PALB2-205ENST00000567003 DDA1Q9BW61 102 aa15.45■□□□□ 0.06
PALB2-205ENST00000567003 TRNAU1APQ9NX07 287 aaKnown RBP15.45■□□□□ 0.06
PALB2-205ENST00000567003 KCNK4Q9NYG8 393 aa15.45■□□□□ 0.06
PALB2-205ENST00000567003 PCSK1NQ9UHG2 260 aa15.45■□□□□ 0.06
PALB2-205ENST00000567003 CD84Q9UIB8 345 aa15.45■□□□□ 0.06
PALB2-205ENST00000567003 SIK3Q9Y2K2 1263 aa15.45■□□□□ 0.06
PALB2-205ENST00000567003 TMEM98Q9Y2Y6 226 aa15.45■□□□□ 0.06
PALB2-205ENST00000567003 SPTBN1Q01082 2364 aaKnown RBP15.44■□□□□ 0.06
PALB2-205ENST00000567003 LOC101059948A0A1B0GTJ6 334 aa15.44■□□□□ 0.06
PALB2-205ENST00000567003 DAPK3O43293 454 aa15.44■□□□□ 0.06
PALB2-205ENST00000567003 CPP00450 1065 aa15.44■□□□□ 0.06
PALB2-205ENST00000567003 CR2P20023 1033 aa15.44■□□□□ 0.06
PALB2-205ENST00000567003 AIF1P55008 147 aa15.44■□□□□ 0.06
PALB2-205ENST00000567003 AP1S1P61966 158 aa15.44■□□□□ 0.06
PALB2-205ENST00000567003 POLR2LP62875 67 aaKnown RBP15.44■□□□□ 0.06
PALB2-205ENST00000567003 TRAF2Q12933 501 aa15.44■□□□□ 0.06
PALB2-205ENST00000567003 CLPPQ16740 277 aaPredicted RBP15.44■□□□□ 0.06
PALB2-205ENST00000567003 RFX8Q6ZV50 586 aa15.44■□□□□ 0.06
PALB2-205ENST00000567003 Q6ZVL8 140 aa15.44■□□□□ 0.06
PALB2-205ENST00000567003 MARK2Q7KZI7 788 aaKnown RBP15.44■□□□□ 0.06
PALB2-205ENST00000567003 PGBD5Q8N414 524 aa15.44■□□□□ 0.06
PALB2-205ENST00000567003 ARFGAP1Q8N6T3 406 aa15.44■□□□□ 0.06
PALB2-205ENST00000567003 BMPERQ8N8U9 685 aa15.44■□□□□ 0.06
PALB2-205ENST00000567003 C9orf43Q8TAL5 461 aaPredicted RBP15.44■□□□□ 0.06
PALB2-205ENST00000567003 AGPAT1Q99943 283 aa15.44■□□□□ 0.06
PALB2-205ENST00000567003 TAS2R14Q9NYV8 317 aa15.44■□□□□ 0.06
PALB2-205ENST00000567003 PLAAQ9Y263 795 aa15.44■□□□□ 0.06
PALB2-205ENST00000567003 NOTCH2Q04721 2471 aa15.43■□□□□ 0.06
PALB2-205ENST00000567003 NPIPB15A6NHN6 443 aaPredicted RBP15.43■□□□□ 0.06
PALB2-205ENST00000567003 EML2O95834 649 aa15.43■□□□□ 0.06
PALB2-205ENST00000567003 GP1BBP13224 206 aa15.43■□□□□ 0.06
PALB2-205ENST00000567003 CTPS1P17812 591 aa15.43■□□□□ 0.06
PALB2-205ENST00000567003 PSMA2P25787 234 aa15.43■□□□□ 0.06
PALB2-205ENST00000567003 OAS2P29728 719 aaKnown RBP15.43■□□□□ 0.06
PALB2-205ENST00000567003 HTR7P34969 479 aa15.43■□□□□ 0.06
PALB2-205ENST00000567003 IL10RBQ08334 325 aa15.43■□□□□ 0.06
PALB2-205ENST00000567003 NSUN2Q08J23 767 aaKnown RBP eCLIP15.43■□□□□ 0.06
PALB2-205ENST00000567003 CDC20Q12834 499 aa15.43■□□□□ 0.06
PALB2-205ENST00000567003 LBRQ14739 615 aaKnown RBP15.43■□□□□ 0.06
PALB2-205ENST00000567003 SYCP1Q15431 976 aa15.43■□□□□ 0.06
PALB2-205ENST00000567003 DEFB109BQ30KR1 87 aa15.43■□□□□ 0.06
PALB2-205ENST00000567003 PPP6R3Q5H9R7 873 aaPredicted RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms