RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 RAET1GQ6H3X3 334 aa20.15■□□□□ 0.82
CLN6-207ENST00000566347 Q6ZVL8 140 aa20.15■□□□□ 0.82
CLN6-207ENST00000566347 GPR155Q7Z3F1 870 aa20.15■□□□□ 0.82
CLN6-207ENST00000566347 CCDC97Q96F63 343 aaPredicted RBP20.15■□□□□ 0.82
CLN6-207ENST00000566347 PRR11Q96HE9 360 aaPredicted RBP20.15■□□□□ 0.82
CLN6-207ENST00000566347 NAF1Q96HR8 494 aaKnown RBP20.15■□□□□ 0.82
CLN6-207ENST00000566347 BBC3Q96PG8 261 aaPredicted RBP20.15■□□□□ 0.82
CLN6-207ENST00000566347 STRADBQ9C0K7 418 aa20.15■□□□□ 0.82
CLN6-207ENST00000566347 LRRN3Q9H3W5 708 aa20.15■□□□□ 0.82
CLN6-207ENST00000566347 DPEP2Q9H4A9 486 aa20.15■□□□□ 0.82
CLN6-207ENST00000566347 RBM22Q9NW64 420 aaKnown RBP eCLIP20.15■□□□□ 0.82
CLN6-207ENST00000566347 DNPEPQ9ULA0 475 aa20.15■□□□□ 0.82
CLN6-207ENST00000566347 TEX51A0A1B0GUA7 166 aa20.14■□□□□ 0.81
CLN6-207ENST00000566347 GOLGA6CA6NDK9 693 aa20.14■□□□□ 0.81
CLN6-207ENST00000566347 GOLGA6BA6NDN3 693 aa20.14■□□□□ 0.81
CLN6-207ENST00000566347 B4DGG1 531 aa20.14■□□□□ 0.81
CLN6-207ENST00000566347 CASC3O15234 703 aaKnown RBP20.14■□□□□ 0.81
CLN6-207ENST00000566347 NOBOXO60393 691 aa20.14■□□□□ 0.81
CLN6-207ENST00000566347 CEACAM5P06731 702 aa20.14■□□□□ 0.81
CLN6-207ENST00000566347 PDHA1P08559 390 aa20.14■□□□□ 0.81
CLN6-207ENST00000566347 TMEM253P0C7T8 217 aa20.14■□□□□ 0.81
CLN6-207ENST00000566347 GOLGA6DP0CG33 693 aa20.14■□□□□ 0.81
CLN6-207ENST00000566347 ZNF30P17039 623 aa20.14■□□□□ 0.81
CLN6-207ENST00000566347 CTPS1P17812 591 aa20.14■□□□□ 0.81
CLN6-207ENST00000566347 EPHB1P54762 984 aa20.14■□□□□ 0.81
CLN6-207ENST00000566347 TAS2R40P59535 323 aa20.14■□□□□ 0.81
CLN6-207ENST00000566347 ILF3Q12906 894 aaKnown RBP eCLIP20.14■□□□□ 0.81
CLN6-207ENST00000566347 ASTE1Q2TB18 679 aaPredicted RBP20.14■□□□□ 0.81
CLN6-207ENST00000566347 ZFYVE27Q5T4F4 411 aa20.14■□□□□ 0.81
CLN6-207ENST00000566347 FOXR1Q6PIV2 292 aa20.14■□□□□ 0.81
CLN6-207ENST00000566347 TSPAN33Q86UF1 283 aa20.14■□□□□ 0.81
CLN6-207ENST00000566347 CPNE8Q86YQ8 564 aa20.14■□□□□ 0.81
CLN6-207ENST00000566347 CCNJLQ8IV13 435 aa20.14■□□□□ 0.81
CLN6-207ENST00000566347 GPBAR1Q8TDU6 330 aa20.14■□□□□ 0.81
CLN6-207ENST00000566347 TMEM74Q96NL1 305 aa20.14■□□□□ 0.81
CLN6-207ENST00000566347 PACSIN1Q9BY11 444 aa20.14■□□□□ 0.81
CLN6-207ENST00000566347 GSDMCQ9BYG8 508 aa20.14■□□□□ 0.81
CLN6-207ENST00000566347 FRMD8Q9BZ67 464 aaPredicted RBP20.14■□□□□ 0.81
CLN6-207ENST00000566347 TRNAU1APQ9NX07 287 aaKnown RBP20.14■□□□□ 0.81
CLN6-207ENST00000566347 GOLGA6AQ9NYA3 693 aa20.14■□□□□ 0.81
CLN6-207ENST00000566347 TTLL3Q9Y4R7 772 aa20.14■□□□□ 0.81
CLN6-207ENST00000566347 BAHCC1Q9P281 2608 aa20.14■□□□□ 0.81
CLN6-207ENST00000566347 ARHGEF17Q96PE2 2063 aaPredicted RBP20.14■□□□□ 0.81
CLN6-207ENST00000566347 UNC13CQ8NB66 2214 aa20.13■□□□□ 0.81
CLN6-207ENST00000566347 A0A0J9YYE9 177 aa20.13■□□□□ 0.81
CLN6-207ENST00000566347 A0A1W2PQM1 296 aa20.13■□□□□ 0.81
CLN6-207ENST00000566347 CDRT15L2A8MXV6 281 aa20.13■□□□□ 0.81
CLN6-207ENST00000566347 NUDT21O43809 227 aaKnown RBP20.13■□□□□ 0.81
CLN6-207ENST00000566347 AKR1B10O60218 316 aa20.13■□□□□ 0.81
CLN6-207ENST00000566347 TRBC1P01850 177 aa20.13■□□□□ 0.81
CLN6-207ENST00000566347 PYGLP06737 847 aa20.13■□□□□ 0.81
CLN6-207ENST00000566347 ITGA2BP08514 1039 aa20.13■□□□□ 0.81
CLN6-207ENST00000566347 CCNB1P14635 433 aa20.13■□□□□ 0.81
CLN6-207ENST00000566347 TMPRSS3P57727 454 aa20.13■□□□□ 0.81
CLN6-207ENST00000566347 CXADRP78310 365 aa20.13■□□□□ 0.81
CLN6-207ENST00000566347 PEX6Q13608 980 aa20.13■□□□□ 0.81
CLN6-207ENST00000566347 HLTFQ14527 1009 aaKnown RBP eCLIP20.13■□□□□ 0.81
CLN6-207ENST00000566347 LRRC66Q68CR7 880 aa20.13■□□□□ 0.81
CLN6-207ENST00000566347 TECPR1Q7Z6L1 1165 aa20.13■□□□□ 0.81
CLN6-207ENST00000566347 CCL4L1Q8NHW4 92 aa20.13■□□□□ 0.81
CLN6-207ENST00000566347 ZNF830Q96NB3 372 aaPredicted RBP20.13■□□□□ 0.81
CLN6-207ENST00000566347 EPB41L5Q9HCM4 733 aa20.13■□□□□ 0.81
CLN6-207ENST00000566347 LRIT1Q9P2V4 623 aa20.13■□□□□ 0.81
CLN6-207ENST00000566347 SMG1Q96Q15 3661 aaKnown RBP20.13■□□□□ 0.81
CLN6-207ENST00000566347 PLD2O14939 933 aa20.12■□□□□ 0.81
CLN6-207ENST00000566347 KLK10O43240 276 aa20.12■□□□□ 0.81
CLN6-207ENST00000566347 TNFSF15O95150 251 aa20.12■□□□□ 0.81
CLN6-207ENST00000566347 MAP3K6O95382 1288 aa20.12■□□□□ 0.81
CLN6-207ENST00000566347 CCKBRP32239 447 aa20.12■□□□□ 0.81
CLN6-207ENST00000566347 GPR1P46091 355 aa20.12■□□□□ 0.81
CLN6-207ENST00000566347 GNPDA1P46926 289 aa20.12■□□□□ 0.81
CLN6-207ENST00000566347 INHBCP55103 352 aa20.12■□□□□ 0.81
CLN6-207ENST00000566347 RPL26P61254 145 aaKnown RBP20.12■□□□□ 0.81
CLN6-207ENST00000566347 SKOR1P84550 965 aa20.12■□□□□ 0.81
CLN6-207ENST00000566347 DSC2Q02487 901 aa20.12■□□□□ 0.81
CLN6-207ENST00000566347 GBE1Q04446 702 aa20.12■□□□□ 0.81
CLN6-207ENST00000566347 ZNF765Q7L2R6 523 aa20.12■□□□□ 0.81
CLN6-207ENST00000566347 B3GNT8Q7Z7M8 397 aa20.12■□□□□ 0.81
CLN6-207ENST00000566347 CLEC14AQ86T13 490 aa20.12■□□□□ 0.81
CLN6-207ENST00000566347 NLRP8Q86W28 1048 aa20.12■□□□□ 0.81
CLN6-207ENST00000566347 RAVER1Q8IY67 606 aaKnown RBP20.12■□□□□ 0.81
CLN6-207ENST00000566347 PQLC3Q8N755 202 aa20.12■□□□□ 0.81
CLN6-207ENST00000566347 Q8N9G6 341 aaPredicted RBP20.12■□□□□ 0.81
CLN6-207ENST00000566347 LSM14AQ8ND56 463 aaKnown RBP20.12■□□□□ 0.81
CLN6-207ENST00000566347 AP2M1Q96CW1 435 aa20.12■□□□□ 0.81
CLN6-207ENST00000566347 HDAC11Q96DB2 347 aa20.12■□□□□ 0.81
CLN6-207ENST00000566347 TDRD1Q9BXT4 1180 aaKnown RBP20.12■□□□□ 0.81
CLN6-207ENST00000566347 SUFUQ9UMX1 484 aa20.12■□□□□ 0.81
CLN6-207ENST00000566347 RPL26L1Q9UNX3 145 aaKnown RBP20.12■□□□□ 0.81
CLN6-207ENST00000566347 SLC17A4Q9Y2C5 497 aa20.12■□□□□ 0.81
CLN6-207ENST00000566347 RNF215Q9Y6U7 377 aa20.12■□□□□ 0.81
CLN6-207ENST00000566347 CAPN8A6NHC0 703 aa20.11■□□□□ 0.81
CLN6-207ENST00000566347 ZNF487B1APH4 448 aa20.11■□□□□ 0.81
CLN6-207ENST00000566347 TK2O00142 265 aa20.11■□□□□ 0.81
CLN6-207ENST00000566347 IVLP07476 585 aa20.11■□□□□ 0.81
CLN6-207ENST00000566347 KDELR1P24390 212 aa20.11■□□□□ 0.81
CLN6-207ENST00000566347 ARHGAP25P42331 645 aa20.11■□□□□ 0.81
CLN6-207ENST00000566347 PTSQ03393 145 aa20.11■□□□□ 0.81
CLN6-207ENST00000566347 MESDQ14696 234 aa20.11■□□□□ 0.81
CLN6-207ENST00000566347 PTPRRQ15256 657 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms