RNA–Protein interactions for RNA: ENST00000565370.1

SPG7-211, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 686 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-211ENST00000565370 LVRNQ6Q4G3 990 aa12.28□□□□□ -0.44
SPG7-211ENST00000565370 CRTC1Q6UUV9 634 aa12.28□□□□□ -0.44
SPG7-211ENST00000565370 RAD9BQ6WBX8 426 aa12.28□□□□□ -0.44
SPG7-211ENST00000565370 HSD11B1LQ7Z5J1 315 aa12.28□□□□□ -0.44
SPG7-211ENST00000565370 NT5DC3Q86UY8 548 aa12.28□□□□□ -0.44
SPG7-211ENST00000565370 RAVER1Q8IY67 606 aaKnown RBP12.28□□□□□ -0.44
SPG7-211ENST00000565370 SYCE1Q8N0S2 351 aa12.28□□□□□ -0.44
SPG7-211ENST00000565370 PIAS4Q8N2W9 510 aaPredicted RBP12.28□□□□□ -0.44
SPG7-211ENST00000565370 PDCD7Q8N8D1 485 aaKnown RBP12.28□□□□□ -0.44
SPG7-211ENST00000565370 ARL10Q8N8L6 244 aa12.28□□□□□ -0.44
SPG7-211ENST00000565370 SPC24Q8NBT2 197 aa12.28□□□□□ -0.44
SPG7-211ENST00000565370 IFI44Q8TCB0 444 aa12.28□□□□□ -0.44
SPG7-211ENST00000565370 MAPK15Q8TD08 544 aa12.28□□□□□ -0.44
SPG7-211ENST00000565370 AP2M1Q96CW1 435 aa12.28□□□□□ -0.44
SPG7-211ENST00000565370 DEPDC7Q96QD5 511 aa12.28□□□□□ -0.44
SPG7-211ENST00000565370 LYSMD1Q96S90 227 aa12.28□□□□□ -0.44
SPG7-211ENST00000565370 BOCQ9BWV1 1114 aa12.28□□□□□ -0.44
SPG7-211ENST00000565370 ABCG4Q9H172 646 aa12.28□□□□□ -0.44
SPG7-211ENST00000565370 SLC25A51Q9H1U9 297 aa12.28□□□□□ -0.44
SPG7-211ENST00000565370 FGF22Q9HCT0 170 aa12.28□□□□□ -0.44
SPG7-211ENST00000565370 PKD2L2Q9NZM6 624 aa12.28□□□□□ -0.44
SPG7-211ENST00000565370 KLHL8Q9P2G9 620 aaPredicted RBP12.28□□□□□ -0.44
SPG7-211ENST00000565370 TFR2Q9UP52 801 aa12.28□□□□□ -0.44
SPG7-211ENST00000565370 CLCA2Q9UQC9 943 aa12.28□□□□□ -0.44
SPG7-211ENST00000565370 SPEGQ15772 3267 aa12.28□□□□□ -0.44
SPG7-211ENST00000565370 FAM149AA5PLN7 773 aa12.27□□□□□ -0.45
SPG7-211ENST00000565370 HACD1B0YJ81 288 aa12.27□□□□□ -0.45
SPG7-211ENST00000565370 APOC4-APOC2K7ER74 178 aa12.27□□□□□ -0.45
SPG7-211ENST00000565370 APOC2P02655 101 aa12.27□□□□□ -0.45
SPG7-211ENST00000565370 PTMAP06454 111 aaKnown RBP12.27□□□□□ -0.45
SPG7-211ENST00000565370 PECAM1P16284 738 aaPredicted RBP12.27□□□□□ -0.45
SPG7-211ENST00000565370 MARCKSL1P49006 195 aa12.27□□□□□ -0.45
SPG7-211ENST00000565370 STC1P52823 247 aa12.27□□□□□ -0.45
SPG7-211ENST00000565370 RWDD2BP57060 319 aa12.27□□□□□ -0.45
SPG7-211ENST00000565370 SKOR1P84550 965 aa12.27□□□□□ -0.45
SPG7-211ENST00000565370 CDK3Q00526 305 aa12.27□□□□□ -0.45
SPG7-211ENST00000565370 INSM1Q01101 510 aaPredicted RBP12.27□□□□□ -0.45
SPG7-211ENST00000565370 NIPAL4Q0D2K0 466 aa12.27□□□□□ -0.45
SPG7-211ENST00000565370 PEX6Q13608 980 aa12.27□□□□□ -0.45
SPG7-211ENST00000565370 GALNT3Q14435 633 aa12.27□□□□□ -0.45
SPG7-211ENST00000565370 CDKN3Q16667 212 aa12.27□□□□□ -0.45
SPG7-211ENST00000565370 Q6ZVL8 140 aa12.27□□□□□ -0.45
SPG7-211ENST00000565370 BBS12Q6ZW61 710 aa12.27□□□□□ -0.45
SPG7-211ENST00000565370 EFL1Q7Z2Z2 1120 aaKnown RBP12.27□□□□□ -0.45
SPG7-211ENST00000565370 NRSN1Q8IZ57 195 aa12.27□□□□□ -0.45
SPG7-211ENST00000565370 UBL4BQ8N7F7 174 aa12.27□□□□□ -0.45
SPG7-211ENST00000565370 OR6C4Q8NGE1 309 aa12.27□□□□□ -0.45
SPG7-211ENST00000565370 WDR48Q8TAF3 677 aa12.27□□□□□ -0.45
SPG7-211ENST00000565370 KIAA1524Q8TCG1 905 aa12.27□□□□□ -0.45
SPG7-211ENST00000565370 HAUS1Q96CS2 278 aa12.27□□□□□ -0.45
SPG7-211ENST00000565370 IMP4Q96G21 291 aaKnown RBP12.27□□□□□ -0.45
SPG7-211ENST00000565370 QKIQ96PU8 341 aaKnown RBP eCLIP12.27□□□□□ -0.45
SPG7-211ENST00000565370 SRPK1Q96SB4 655 aaKnown RBP12.27□□□□□ -0.45
SPG7-211ENST00000565370 RBM15Q96T37 977 aaKnown RBP eCLIP12.27□□□□□ -0.45
SPG7-211ENST00000565370 VAT1Q99536 393 aa12.27□□□□□ -0.45
SPG7-211ENST00000565370 MLPHQ9BV36 600 aaPredicted RBP12.27□□□□□ -0.45
SPG7-211ENST00000565370 TEX101Q9BY14 249 aa12.27□□□□□ -0.45
SPG7-211ENST00000565370 CDH19Q9H159 772 aa12.27□□□□□ -0.45
SPG7-211ENST00000565370 CYP4F12Q9HCS2 524 aa12.27□□□□□ -0.45
SPG7-211ENST00000565370 GPR34Q9UPC5 381 aa12.27□□□□□ -0.45
SPG7-211ENST00000565370 AKAP13Q12802 2813 aa12.27□□□□□ -0.45
SPG7-211ENST00000565370 ZZEF1O43149 2961 aa12.26□□□□□ -0.45
SPG7-211ENST00000565370 LY6G6EA0A0G2JKS1 128 aa12.26□□□□□ -0.45
SPG7-211ENST00000565370 CPED1A4D0V7 1026 aa12.26□□□□□ -0.45
SPG7-211ENST00000565370 EME2A4GXA9 379 aaPredicted RBP12.26□□□□□ -0.45
SPG7-211ENST00000565370 TMEM202A6NGA9 273 aa12.26□□□□□ -0.45
SPG7-211ENST00000565370 MIF4GDA9UHW6 222 aaKnown RBP12.26□□□□□ -0.45
SPG7-211ENST00000565370 YY2O15391 372 aa12.26□□□□□ -0.45
SPG7-211ENST00000565370 PJA2O43164 708 aa12.26□□□□□ -0.45
SPG7-211ENST00000565370 OPA1O60313 960 aa12.26□□□□□ -0.45
SPG7-211ENST00000565370 GCATO75600 419 aa12.26□□□□□ -0.45
SPG7-211ENST00000565370 STK10O94804 968 aaKnown RBP12.26□□□□□ -0.45
SPG7-211ENST00000565370 MMP2P08253 660 aa12.26□□□□□ -0.45
SPG7-211ENST00000565370 PTPN3P26045 913 aa12.26□□□□□ -0.45
SPG7-211ENST00000565370 ILF3Q12906 894 aaKnown RBP eCLIP12.26□□□□□ -0.457e-6■■■■□ 19.9
SPG7-211ENST00000565370 LLGL1Q15334 1064 aa12.26□□□□□ -0.45
SPG7-211ENST00000565370 TCEA2Q15560 299 aa12.26□□□□□ -0.45
SPG7-211ENST00000565370 PCSK7Q16549 785 aa12.26□□□□□ -0.45
SPG7-211ENST00000565370 TEX44Q53QW1 395 aa12.26□□□□□ -0.45
SPG7-211ENST00000565370 GUSBP11Q6P575 273 aa12.26□□□□□ -0.45
SPG7-211ENST00000565370 ADAMTSL4Q6UY14 1074 aa12.26□□□□□ -0.45
SPG7-211ENST00000565370 TECPR1Q7Z6L1 1165 aa12.26□□□□□ -0.45
SPG7-211ENST00000565370 TAF8Q7Z7C8 310 aa12.26□□□□□ -0.45
SPG7-211ENST00000565370 ZC3H18Q86VM9 953 aaKnown RBP12.26□□□□□ -0.45
SPG7-211ENST00000565370 CDKL3Q8IVW4 592 aaPredicted RBP12.26□□□□□ -0.45
SPG7-211ENST00000565370 SLC35F3Q8IY50 421 aa12.26□□□□□ -0.45
SPG7-211ENST00000565370 CACTIN-AS1Q8N1I8 211 aa12.26□□□□□ -0.45
SPG7-211ENST00000565370 CNTD1Q8N815 330 aa12.26□□□□□ -0.45
SPG7-211ENST00000565370 DCBLD1Q8N8Z6 715 aa12.26□□□□□ -0.45
SPG7-211ENST00000565370 OR1E3Q8WZA6 343 aa12.26□□□□□ -0.45
SPG7-211ENST00000565370 KRT35Q92764 455 aa12.26□□□□□ -0.45
SPG7-211ENST00000565370 GSDMCQ9BYG8 508 aa12.26□□□□□ -0.45
SPG7-211ENST00000565370 TSGA10Q9BZW7 698 aa12.26□□□□□ -0.45
SPG7-211ENST00000565370 CLPBQ9H078 707 aa12.26□□□□□ -0.45
SPG7-211ENST00000565370 SYNDIG1Q9H7V2 258 aa12.26□□□□□ -0.45
SPG7-211ENST00000565370 CARS2Q9HA77 564 aaKnown RBP12.26□□□□□ -0.45
SPG7-211ENST00000565370 GLOD4Q9HC38 313 aa12.26□□□□□ -0.45
SPG7-211ENST00000565370 RAD18Q9NS91 495 aa12.26□□□□□ -0.45
SPG7-211ENST00000565370 SIRPGQ9P1W8 387 aa12.26□□□□□ -0.45
SPG7-211ENST00000565370 CD84Q9UIB8 345 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms