RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 CYP46A1Q9Y6A2 500 aa4.75□□□□□ -1.65
UBR1-205ENST00000564540 FTCDO95954 541 aa4.74□□□□□ -1.65
UBR1-205ENST00000564540 F9P00740 461 aa4.74□□□□□ -1.65
UBR1-205ENST00000564540 CRYAAP02489 173 aa4.74□□□□□ -1.65
UBR1-205ENST00000564540 SP1P08047 785 aa4.74□□□□□ -1.65
UBR1-205ENST00000564540 CDH1P12830 882 aa4.74□□□□□ -1.65
UBR1-205ENST00000564540 S1PR1P21453 382 aa4.74□□□□□ -1.65
UBR1-205ENST00000564540 TCEA1P23193 301 aaKnown RBP4.74□□□□□ -1.65
UBR1-205ENST00000564540 MCM3P25205 808 aa4.74□□□□□ -1.65
UBR1-205ENST00000564540 BDKRB2P30411 391 aa4.74□□□□□ -1.65
UBR1-205ENST00000564540 ABCD1P33897 745 aa4.74□□□□□ -1.65
UBR1-205ENST00000564540 GABRB2P47870 512 aa4.74□□□□□ -1.65
UBR1-205ENST00000564540 CLCN3P51790 818 aa4.74□□□□□ -1.65
UBR1-205ENST00000564540 KCNT1Q5JUK3 1230 aa4.74□□□□□ -1.65
UBR1-205ENST00000564540 METTL2BQ6P1Q9 378 aaKnown RBP4.74□□□□□ -1.65
UBR1-205ENST00000564540 GDPD4Q6W3E5 623 aa4.74□□□□□ -1.65
UBR1-205ENST00000564540 DSG4Q86SJ6 1040 aa4.74□□□□□ -1.65
UBR1-205ENST00000564540 TMPRSS12Q86WS5 348 aa4.74□□□□□ -1.65
UBR1-205ENST00000564540 TMEM219Q86XT9 240 aa4.74□□□□□ -1.65
UBR1-205ENST00000564540 ZBTB8BQ8NAP8 495 aaPredicted RBP4.74□□□□□ -1.65
UBR1-205ENST00000564540 PPM1EQ8WY54 764 aa4.74□□□□□ -1.65
UBR1-205ENST00000564540 ABTB1Q969K4 478 aaPredicted RBP4.74□□□□□ -1.65
UBR1-205ENST00000564540 METTL2AQ96IZ6 378 aaKnown RBP4.74□□□□□ -1.65
UBR1-205ENST00000564540 SLC41A2Q96JW4 573 aa4.74□□□□□ -1.65
UBR1-205ENST00000564540 PCYT2Q99447 389 aa4.74□□□□□ -1.65
UBR1-205ENST00000564540 FAM110AQ9BQ89 295 aa4.74□□□□□ -1.65
UBR1-205ENST00000564540 CEPT1Q9Y6K0 416 aa4.74□□□□□ -1.65
UBR1-205ENST00000564540 PRR23AA6NEV1 266 aa4.73□□□□□ -1.65
UBR1-205ENST00000564540 AKR1B15C9JRZ8 316 aaPredicted RBP4.73□□□□□ -1.65
UBR1-205ENST00000564540 GAS8-AS1O95177 125 aa4.73□□□□□ -1.65
UBR1-205ENST00000564540 NEXNQ0ZGT2 675 aa4.73□□□□□ -1.65
UBR1-205ENST00000564540 FGFBP1Q14512 234 aa4.73□□□□□ -1.65
UBR1-205ENST00000564540 PLEKHA7Q6IQ23 1121 aa4.73□□□□□ -1.65
UBR1-205ENST00000564540 KCTD18Q6PI47 426 aaPredicted RBP4.73□□□□□ -1.65
UBR1-205ENST00000564540 DCUN1D3Q8IWE4 304 aa4.73□□□□□ -1.65
UBR1-205ENST00000564540 KCNH5Q8NCM2 988 aa4.73□□□□□ -1.65
UBR1-205ENST00000564540 MMP28Q9H239 520 aa4.73□□□□□ -1.65
UBR1-205ENST00000564540 PCDHB16Q9NRJ7 776 aa4.73□□□□□ -1.65
UBR1-205ENST00000564540 RALYQ9UKM9 306 aaKnown RBP4.73□□□□□ -1.65
UBR1-205ENST00000564540 PADI1Q9ULC6 663 aa4.73□□□□□ -1.65
UBR1-205ENST00000564540 TTC7AQ9ULT0 858 aaPredicted RBP4.73□□□□□ -1.65
UBR1-205ENST00000564540 ARHGAP26Q9UNA1 814 aa4.73□□□□□ -1.65
UBR1-205ENST00000564540 NAALADL1Q9UQQ1 740 aa4.73□□□□□ -1.65
UBR1-205ENST00000564540 ADAM18Q9Y3Q7 739 aa4.73□□□□□ -1.65
UBR1-205ENST00000564540 CCDC196A0A1B0GTZ2 297 aa4.72□□□□□ -1.65
UBR1-205ENST00000564540 CYSRT1A8MQ03 144 aa4.72□□□□□ -1.65
UBR1-205ENST00000564540 USP17L23D6RBM5 183 aa4.72□□□□□ -1.65
UBR1-205ENST00000564540 C16orf97H3BN30 126 aa4.72□□□□□ -1.65
UBR1-205ENST00000564540 TPD52L2O43399 206 aaKnown RBP4.72□□□□□ -1.65
UBR1-205ENST00000564540 SOCS5O75159 536 aa4.72□□□□□ -1.65
UBR1-205ENST00000564540 DDX5P17844 614 aaKnown RBP4.72□□□□□ -1.65
UBR1-205ENST00000564540 XBP1P17861 261 aa4.72□□□□□ -1.65
UBR1-205ENST00000564540 CORO1AP31146 461 aaKnown RBP4.72□□□□□ -1.65
UBR1-205ENST00000564540 CPOXP36551 454 aa4.72□□□□□ -1.65
UBR1-205ENST00000564540 CTCFP49711 727 aaPredicted RBP4.72□□□□□ -1.65
UBR1-205ENST00000564540 RAD23BP54727 409 aa4.72□□□□□ -1.65
UBR1-205ENST00000564540 SYT16Q17RD7 645 aa4.72□□□□□ -1.65
UBR1-205ENST00000564540 KRT24Q2M2I5 525 aa4.72□□□□□ -1.65
UBR1-205ENST00000564540 TMEM95Q3KNT9 176 aa4.72□□□□□ -1.65
UBR1-205ENST00000564540 OTUD3Q5T2D3 398 aaPredicted RBP4.72□□□□□ -1.65
UBR1-205ENST00000564540 GPATCH4Q5T3I0 446 aaKnown RBP4.72□□□□□ -1.65
UBR1-205ENST00000564540 IRAK1BP1Q5VVH5 260 aa4.72□□□□□ -1.65
UBR1-205ENST00000564540 GGNBP1Q5YKI7 109 aa4.72□□□□□ -1.65
UBR1-205ENST00000564540 DUS1LQ6P1R4 473 aaKnown RBP4.72□□□□□ -1.65
UBR1-205ENST00000564540 SMAP1Q8IYB5 467 aaPredicted RBP4.72□□□□□ -1.65
UBR1-205ENST00000564540 CCDC13Q8IYE1 715 aa4.72□□□□□ -1.65
UBR1-205ENST00000564540 C1orf87Q8N0U7 546 aa4.72□□□□□ -1.65
UBR1-205ENST00000564540 IL17RCQ8NAC3 791 aa4.72□□□□□ -1.65
UBR1-205ENST00000564540 OR13A1Q8NGR1 328 aa4.72□□□□□ -1.65
UBR1-205ENST00000564540 NFKBIDQ8NI38 313 aa4.72□□□□□ -1.65
UBR1-205ENST00000564540 HMGCLL1Q8TB92 370 aa4.72□□□□□ -1.65
UBR1-205ENST00000564540 MAGEC3Q8TD91 643 aa4.72□□□□□ -1.65
UBR1-205ENST00000564540 MORC4Q8TE76 937 aa4.72□□□□□ -1.65
UBR1-205ENST00000564540 SH3GL2Q99962 352 aa4.72□□□□□ -1.65
UBR1-205ENST00000564540 PAIP1Q9H074 479 aaKnown RBP4.72□□□□□ -1.65
UBR1-205ENST00000564540 BRF2Q9HAW0 419 aa4.72□□□□□ -1.65
UBR1-205ENST00000564540 WASH6PQ9NQA3 447 aa4.72□□□□□ -1.65
UBR1-205ENST00000564540 KLHL1Q9NR64 748 aa4.72□□□□□ -1.65
UBR1-205ENST00000564540 SLC6A13Q9NSD5 602 aa4.72□□□□□ -1.65
UBR1-205ENST00000564540 ZFP57Q9NU63 452 aa4.72□□□□□ -1.65
UBR1-205ENST00000564540 TMEM30AQ9NV96 361 aa4.72□□□□□ -1.65
UBR1-205ENST00000564540 CAMK2AQ9UQM7 478 aa4.72□□□□□ -1.65
UBR1-205ENST00000564540 CRYL1Q9Y2S2 319 aa4.72□□□□□ -1.65
UBR1-205ENST00000564540 AMDHD2Q9Y303 409 aa4.72□□□□□ -1.65
UBR1-205ENST00000564540 AAR2Q9Y312 384 aaKnown RBP4.72□□□□□ -1.65
UBR1-205ENST00000564540 LRRC53A6NM62 1247 aa4.71□□□□□ -1.66
UBR1-205ENST00000564540 VCYO14598 125 aa4.71□□□□□ -1.66
UBR1-205ENST00000564540 CETPP11597 493 aa4.71□□□□□ -1.66
UBR1-205ENST00000564540 MYOD1P15172 320 aa4.71□□□□□ -1.66
UBR1-205ENST00000564540 MARK3P27448 753 aa4.71□□□□□ -1.66
UBR1-205ENST00000564540 CDAP32320 146 aa4.71□□□□□ -1.66
UBR1-205ENST00000564540 FOXD4Q12950 439 aaPredicted RBP4.71□□□□□ -1.66
UBR1-205ENST00000564540 ZNF280DQ6N043 979 aa4.71□□□□□ -1.66
UBR1-205ENST00000564540 GSG1LQ6UXU4 331 aa4.71□□□□□ -1.66
UBR1-205ENST00000564540 PQLC2Q6ZP29 291 aa4.71□□□□□ -1.66
UBR1-205ENST00000564540 RRP36Q96EU6 259 aaKnown RBP4.71□□□□□ -1.66
UBR1-205ENST00000564540 GRAMD2BQ96HH9 432 aa4.71□□□□□ -1.66
UBR1-205ENST00000564540 HES6Q96HZ4 224 aa4.71□□□□□ -1.66
UBR1-205ENST00000564540 UHRF2Q96PU4 802 aa4.71□□□□□ -1.66
UBR1-205ENST00000564540 MTERF1Q99551 399 aaKnown RBP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms