RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 EPB41L2O43491 1005 aaKnown RBP3.11□□□□□ -1.91
DENND4A-205ENST00000562540 NDUFB4O95168 129 aa3.11□□□□□ -1.91
DENND4A-205ENST00000562540 RTN3O95197 1032 aaPredicted RBP3.11□□□□□ -1.91
DENND4A-205ENST00000562540 MBD4O95243 580 aa3.11□□□□□ -1.91
DENND4A-205ENST00000562540 TBX18O95935 607 aa3.11□□□□□ -1.91
DENND4A-205ENST00000562540 MT-CYBP00156 380 aaPredicted RBP3.11□□□□□ -1.91
DENND4A-205ENST00000562540 TFP02787 698 aa3.11□□□□□ -1.91
DENND4A-205ENST00000562540 ATP1A1P05023 1023 aaKnown RBP3.11□□□□□ -1.91
DENND4A-205ENST00000562540 IGHV4-30-4P0DP06 118 aa3.11□□□□□ -1.91
DENND4A-205ENST00000562540 KRT5P13647 590 aa3.11□□□□□ -1.91
DENND4A-205ENST00000562540 ETFAP13804 333 aa3.11□□□□□ -1.91
DENND4A-205ENST00000562540 CD58P19256 250 aa3.11□□□□□ -1.91
DENND4A-205ENST00000562540 EPHA8P29322 1005 aaPredicted RBP3.11□□□□□ -1.91
DENND4A-205ENST00000562540 KRT2P35908 639 aa3.11□□□□□ -1.91
DENND4A-205ENST00000562540 CDKN1AP38936 164 aa3.11□□□□□ -1.91
DENND4A-205ENST00000562540 GABRB2P47870 512 aa3.11□□□□□ -1.91
DENND4A-205ENST00000562540 CCR9P51686 369 aa3.11□□□□□ -1.91
DENND4A-205ENST00000562540 ZNF132P52740 706 aa3.11□□□□□ -1.91
DENND4A-205ENST00000562540 RARSP54136 660 aaKnown RBP3.11□□□□□ -1.91
DENND4A-205ENST00000562540 GRIK3Q13003 919 aa3.11□□□□□ -1.91
DENND4A-205ENST00000562540 INO80CQ6PI98 192 aaPredicted RBP3.11□□□□□ -1.91
DENND4A-205ENST00000562540 CPLX2Q6PUV4 134 aaKnown RBP3.11□□□□□ -1.91
DENND4A-205ENST00000562540 LCTLQ6UWM7 567 aa3.11□□□□□ -1.91
DENND4A-205ENST00000562540 R3HCC1LQ7Z5L2 792 aaKnown RBP3.11□□□□□ -1.91
DENND4A-205ENST00000562540 DHX40Q8IX18 779 aaKnown RBP3.11□□□□□ -1.91
DENND4A-205ENST00000562540 CNTROBQ8N137 903 aa3.11□□□□□ -1.91
DENND4A-205ENST00000562540 ZCCHC9Q8N567 271 aaKnown RBP3.11□□□□□ -1.91
DENND4A-205ENST00000562540 TEX19Q8NA77 164 aa3.11□□□□□ -1.91
DENND4A-205ENST00000562540 KBTBD3Q8NAB2 608 aa3.11□□□□□ -1.91
DENND4A-205ENST00000562540 METTL6Q8TCB7 284 aa3.11□□□□□ -1.91
DENND4A-205ENST00000562540 TRIB2Q92519 343 aa3.11□□□□□ -1.91
DENND4A-205ENST00000562540 ANKRD9Q96BM1 317 aaPredicted RBP3.11□□□□□ -1.91
DENND4A-205ENST00000562540 MPP4Q96JB8 637 aa3.11□□□□□ -1.91
DENND4A-205ENST00000562540 NR1H4Q96RI1 486 aaPredicted RBP3.11□□□□□ -1.91
DENND4A-205ENST00000562540 ZNF696Q9H7X3 374 aa3.11□□□□□ -1.91
DENND4A-205ENST00000562540 ZNF334Q9HCZ1 680 aaPredicted RBP3.11□□□□□ -1.91
DENND4A-205ENST00000562540 A4GNTQ9UNA3 340 aa3.11□□□□□ -1.91
DENND4A-205ENST00000562540 NAALADL1Q9UQQ1 740 aa3.11□□□□□ -1.91
DENND4A-205ENST00000562540 SMAD5-AS1Q9Y6J3 95 aa3.11□□□□□ -1.91
DENND4A-205ENST00000562540 SCINQ9Y6U3 715 aa3.11□□□□□ -1.91
DENND4A-205ENST00000562540 LRRC53A6NM62 1247 aa3.1□□□□□ -1.91
DENND4A-205ENST00000562540 KLK8O60259 260 aa3.1□□□□□ -1.91
DENND4A-205ENST00000562540 AMBPP02760 352 aa3.1□□□□□ -1.91
DENND4A-205ENST00000562540 HOXB5P09067 269 aa3.1□□□□□ -1.91
DENND4A-205ENST00000562540 CETPP11597 493 aa3.1□□□□□ -1.91
DENND4A-205ENST00000562540 SSTR2P30874 369 aa3.1□□□□□ -1.91
DENND4A-205ENST00000562540 DDIT3P35638 169 aa3.1□□□□□ -1.91
DENND4A-205ENST00000562540 CPOXP36551 454 aa3.1□□□□□ -1.91
DENND4A-205ENST00000562540 GNAQP50148 359 aa3.1□□□□□ -1.91
DENND4A-205ENST00000562540 CLCN3P51790 818 aa3.1□□□□□ -1.91
DENND4A-205ENST00000562540 MPP1Q00013 466 aa3.1□□□□□ -1.91
DENND4A-205ENST00000562540 TSTQ16762 297 aaKnown RBP3.1□□□□□ -1.91
DENND4A-205ENST00000562540 GSTA3Q16772 222 aa3.1□□□□□ -1.91
DENND4A-205ENST00000562540 SOWAHAQ2M3V2 549 aa3.1□□□□□ -1.91
DENND4A-205ENST00000562540 SLC26A9Q7LBE3 791 aa3.1□□□□□ -1.91
DENND4A-205ENST00000562540 SHFQ7M4L6 423 aa3.1□□□□□ -1.91
DENND4A-205ENST00000562540 NOXA1Q86UR1 476 aa3.1□□□□□ -1.91
DENND4A-205ENST00000562540 EPHX4Q8IUS5 362 aa3.1□□□□□ -1.91
DENND4A-205ENST00000562540 AADATQ8N5Z0 425 aa3.1□□□□□ -1.91
DENND4A-205ENST00000562540 ZNF441Q8N8Z8 693 aa3.1□□□□□ -1.91
DENND4A-205ENST00000562540 SCCPDHQ8NBX0 429 aa3.1□□□□□ -1.91
DENND4A-205ENST00000562540 SMARCE1Q969G3 411 aa3.1□□□□□ -1.91
DENND4A-205ENST00000562540 ERGIC1Q969X5 290 aa3.1□□□□□ -1.91
DENND4A-205ENST00000562540 EVI5LQ96CN4 794 aa3.1□□□□□ -1.91
DENND4A-205ENST00000562540 MMTAG2Q9BU76 263 aaKnown RBP3.1□□□□□ -1.91
DENND4A-205ENST00000562540 MAGEE1Q9HCI5 957 aa3.1□□□□□ -1.91
DENND4A-205ENST00000562540 SMC4Q9NTJ3 1288 aa3.1□□□□□ -1.91
DENND4A-205ENST00000562540 ZFP57Q9NU63 452 aa3.1□□□□□ -1.91
DENND4A-205ENST00000562540 DDX43Q9NXZ2 648 aaKnown RBP3.1□□□□□ -1.91
DENND4A-205ENST00000562540 ZNF69Q9UC07 566 aa3.1□□□□□ -1.91
DENND4A-205ENST00000562540 AAR2Q9Y312 384 aaKnown RBP3.1□□□□□ -1.91
DENND4A-205ENST00000562540 KDM3AQ9Y4C1 1321 aa3.1□□□□□ -1.91
DENND4A-205ENST00000562540 KAT6BQ8WYB5 2073 aa3.1□□□□□ -1.91
DENND4A-205ENST00000562540 EIF3CLB5ME19 914 aaKnown RBP3.09□□□□□ -1.91
DENND4A-205ENST00000562540 USP17L23D6RBM5 183 aa3.09□□□□□ -1.91
DENND4A-205ENST00000562540 SEC14L2O76054 403 aa3.09□□□□□ -1.91
DENND4A-205ENST00000562540 CD4P01730 458 aa3.09□□□□□ -1.91
DENND4A-205ENST00000562540 UBL4AP11441 157 aa3.09□□□□□ -1.91
DENND4A-205ENST00000562540 CD53P19397 219 aa3.09□□□□□ -1.91
DENND4A-205ENST00000562540 GPTP24298 496 aa3.09□□□□□ -1.91
DENND4A-205ENST00000562540 PIGAP37287 484 aa3.09□□□□□ -1.91
DENND4A-205ENST00000562540 NOVP48745 357 aa3.09□□□□□ -1.91
DENND4A-205ENST00000562540 RPL7AP62424 266 aaKnown RBP3.09□□□□□ -1.91
DENND4A-205ENST00000562540 PMP22Q01453 160 aa3.09□□□□□ -1.91
DENND4A-205ENST00000562540 GOLGA8DPQ0D2H9 430 aa3.09□□□□□ -1.91
DENND4A-205ENST00000562540 ZBTB17Q13105 803 aa3.09□□□□□ -1.91
DENND4A-205ENST00000562540 DDX10Q13206 875 aaKnown RBP3.09□□□□□ -1.91
DENND4A-205ENST00000562540 NEDD9Q14511 834 aa3.09□□□□□ -1.91
DENND4A-205ENST00000562540 TBCEQ15813 527 aaPredicted RBP3.09□□□□□ -1.91
DENND4A-205ENST00000562540 FAAH2Q6GMR7 532 aa3.09□□□□□ -1.91
DENND4A-205ENST00000562540 CDC73Q6P1J9 531 aa3.09□□□□□ -1.91
DENND4A-205ENST00000562540 C19orf48Q6RUI8 117 aa3.09□□□□□ -1.91
DENND4A-205ENST00000562540 CCDC129Q6ZRS4 1044 aa3.09□□□□□ -1.91
DENND4A-205ENST00000562540 RSRC2Q7L4I2 434 aaKnown RBP3.09□□□□□ -1.91
DENND4A-205ENST00000562540 GSTA5Q7RTV2 222 aa3.09□□□□□ -1.91
DENND4A-205ENST00000562540 MAATS1Q7Z4T9 603 aa3.09□□□□□ -1.91
DENND4A-205ENST00000562540 SLC35F3Q8IY50 421 aa3.09□□□□□ -1.91
DENND4A-205ENST00000562540 DIS3L2Q8IYB7 885 aaKnown RBP3.09□□□□□ -1.91
DENND4A-205ENST00000562540 BEST2Q8NFU1 509 aa3.09□□□□□ -1.91
DENND4A-205ENST00000562540 ETNPPLQ8TBG4 499 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms