RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 AP3D1O14617 1153 aa3.89□□□□□ -1.79
HERC1-215ENST00000561436 HNRNPCL1O60812 293 aaKnown RBP3.89□□□□□ -1.79
HERC1-215ENST00000561436 ZC3H11AO75152 810 aaKnown RBP eCLIP3.89□□□□□ -1.79
HERC1-215ENST00000561436 BCAR3O75815 825 aa3.89□□□□□ -1.79
HERC1-215ENST00000561436 MTA2O94776 668 aa3.89□□□□□ -1.79
HERC1-215ENST00000561436 TOP3BO95985 862 aaKnown RBP3.89□□□□□ -1.79
HERC1-215ENST00000561436 MYZAPP0CAP1 466 aa3.89□□□□□ -1.79
HERC1-215ENST00000561436 LAMP2P13473 410 aa3.89□□□□□ -1.79
HERC1-215ENST00000561436 MYL6BP14649 208 aa3.89□□□□□ -1.79
HERC1-215ENST00000561436 BDNFP23560 247 aa3.89□□□□□ -1.79
HERC1-215ENST00000561436 GPTP24298 496 aa3.89□□□□□ -1.79
HERC1-215ENST00000561436 DRG2P55039 364 aaKnown RBP3.89□□□□□ -1.79
HERC1-215ENST00000561436 FKBP1AP62942 108 aaKnown RBP3.89□□□□□ -1.79
HERC1-215ENST00000561436 PPP2R5BQ15173 497 aa3.89□□□□□ -1.79
HERC1-215ENST00000561436 DPCR1Q3MIW9 517 aa3.89□□□□□ -1.79
HERC1-215ENST00000561436 CCDC152Q4G0S7 254 aa3.89□□□□□ -1.79
HERC1-215ENST00000561436 SYTL3Q4VX76 610 aa3.89□□□□□ -1.79
HERC1-215ENST00000561436 MIDNQ504T8 468 aa3.89□□□□□ -1.79
HERC1-215ENST00000561436 TMEM154Q6P9G4 183 aa3.89□□□□□ -1.79
HERC1-215ENST00000561436 CPLX2Q6PUV4 134 aaKnown RBP3.89□□□□□ -1.79
HERC1-215ENST00000561436 DEF8Q6ZN54 512 aa3.89□□□□□ -1.79
HERC1-215ENST00000561436 COPS6Q7L5N1 327 aa3.89□□□□□ -1.79
HERC1-215ENST00000561436 FASTKD5Q7L8L6 764 aaKnown RBP3.89□□□□□ -1.79
HERC1-215ENST00000561436 KDELC2Q7Z4H8 507 aa3.89□□□□□ -1.79
HERC1-215ENST00000561436 SERPINA11Q86U17 422 aa3.89□□□□□ -1.79
HERC1-215ENST00000561436 TBC1D26Q86UD7 250 aa3.89□□□□□ -1.79
HERC1-215ENST00000561436 RPAP2Q8IXW5 612 aaPredicted RBP3.89□□□□□ -1.79
HERC1-215ENST00000561436 PLD5Q8N7P1 536 aa3.89□□□□□ -1.79
HERC1-215ENST00000561436 CMASQ8NFW8 434 aaPredicted RBP3.89□□□□□ -1.79
HERC1-215ENST00000561436 CADM4Q8NFZ8 388 aa3.89□□□□□ -1.79
HERC1-215ENST00000561436 WIPF2Q8TF74 440 aaPredicted RBP3.89□□□□□ -1.79
HERC1-215ENST00000561436 SCARB1Q8WTV0 552 aa3.89□□□□□ -1.79
HERC1-215ENST00000561436 IGFBPL1Q8WX77 278 aa3.89□□□□□ -1.79
HERC1-215ENST00000561436 RNF183Q96D59 192 aa3.89□□□□□ -1.79
HERC1-215ENST00000561436 BBS4Q96RK4 519 aa3.89□□□□□ -1.79
HERC1-215ENST00000561436 PLEKHF1Q96S99 279 aa3.89□□□□□ -1.79
HERC1-215ENST00000561436 BARD1Q99728 777 aaKnown RBP3.89□□□□□ -1.79
HERC1-215ENST00000561436 CXorf56Q9H5V9 222 aa3.89□□□□□ -1.79
HERC1-215ENST00000561436 THSD1Q9NS62 852 aa3.89□□□□□ -1.79
HERC1-215ENST00000561436 SPATS2LQ9NUQ6 558 aaKnown RBP3.89□□□□□ -1.79
HERC1-215ENST00000561436 TMEM184CQ9NVA4 438 aa3.89□□□□□ -1.79
HERC1-215ENST00000561436 TRNAU1APQ9NX07 287 aaKnown RBP3.89□□□□□ -1.79
HERC1-215ENST00000561436 HYPKQ9NX55 129 aa3.89□□□□□ -1.79
HERC1-215ENST00000561436 NSMCE4AQ9NXX6 385 aa3.89□□□□□ -1.79
HERC1-215ENST00000561436 NLKQ9UBE8 527 aa3.89□□□□□ -1.79
HERC1-215ENST00000561436 DBF4Q9UBU7 674 aaPredicted RBP3.89□□□□□ -1.79
HERC1-215ENST00000561436 POLLQ9UGP5 575 aa3.89□□□□□ -1.79
HERC1-215ENST00000561436 BTBD3Q9Y2F9 522 aa3.89□□□□□ -1.79
HERC1-215ENST00000561436 RABGAP1Q9Y3P9 1069 aa3.89□□□□□ -1.79
HERC1-215ENST00000561436 COL5A3P25940 1745 aaPredicted RBP3.89□□□□□ -1.79
HERC1-215ENST00000561436 KAT6BQ8WYB5 2073 aa3.88□□□□□ -1.79
HERC1-215ENST00000561436 COL1A1P02452 1464 aaPredicted RBP3.88□□□□□ -1.79
HERC1-215ENST00000561436 NPIPB15A6NHN6 443 aaPredicted RBP3.88□□□□□ -1.79
HERC1-215ENST00000561436 K7ENM7 598 aa3.88□□□□□ -1.79
HERC1-215ENST00000561436 CHL1O00533 1208 aa3.88□□□□□ -1.79
HERC1-215ENST00000561436 EBAG9O00559 213 aa3.88□□□□□ -1.79
HERC1-215ENST00000561436 LDHCP07864 332 aa3.88□□□□□ -1.79
HERC1-215ENST00000561436 HOXB5P09067 269 aa3.88□□□□□ -1.79
HERC1-215ENST00000561436 UNGP13051 313 aaPredicted RBP3.88□□□□□ -1.79
HERC1-215ENST00000561436 ENO3P13929 434 aaPredicted RBP3.88□□□□□ -1.79
HERC1-215ENST00000561436 CDH2P19022 906 aaPredicted RBP3.88□□□□□ -1.79
HERC1-215ENST00000561436 PPP2R1AP30153 589 aa3.88□□□□□ -1.79
HERC1-215ENST00000561436 PPARGP37231 505 aaPredicted RBP3.88□□□□□ -1.79
HERC1-215ENST00000561436 PIP4K2AP48426 406 aaPredicted RBP3.88□□□□□ -1.79
HERC1-215ENST00000561436 GNAQP50148 359 aa3.88□□□□□ -1.79
HERC1-215ENST00000561436 OLR1P78380 273 aa3.88□□□□□ -1.79
HERC1-215ENST00000561436 CRYMQ14894 314 aa3.88□□□□□ -1.79
HERC1-215ENST00000561436 TRIP6Q15654 476 aaKnown RBP3.88□□□□□ -1.79
HERC1-215ENST00000561436 FBXO43Q4G163 708 aa3.88□□□□□ -1.79
HERC1-215ENST00000561436 ENTPD8Q5MY95 495 aa3.88□□□□□ -1.79
HERC1-215ENST00000561436 UBAP2Q5T6F2 1119 aaKnown RBP3.88□□□□□ -1.79
HERC1-215ENST00000561436 MORN5Q5VZ52 161 aa3.88□□□□□ -1.79
HERC1-215ENST00000561436 CFAP161Q6P656 301 aa3.88□□□□□ -1.79
HERC1-215ENST00000561436 CCDC129Q6ZRS4 1044 aa3.88□□□□□ -1.79
HERC1-215ENST00000561436 MOB3CQ70IA8 216 aa3.88□□□□□ -1.79
HERC1-215ENST00000561436 TRAPPC11Q7Z392 1133 aa3.88□□□□□ -1.79
HERC1-215ENST00000561436 PXKQ7Z7A4 578 aa3.88□□□□□ -1.79
HERC1-215ENST00000561436 PALB2Q86YC2 1186 aa3.88□□□□□ -1.79
HERC1-215ENST00000561436 LURAP1LQ8IV03 231 aa3.88□□□□□ -1.79
HERC1-215ENST00000561436 LRRC57Q8N9N7 239 aa3.88□□□□□ -1.79
HERC1-215ENST00000561436 CCDC191Q8NCU4 936 aa3.88□□□□□ -1.79
HERC1-215ENST00000561436 MPLKIPQ8TAP9 179 aa3.88□□□□□ -1.79
HERC1-215ENST00000561436 KCNG4Q8TDN1 519 aa3.88□□□□□ -1.79
HERC1-215ENST00000561436 PIGOQ8TEQ8 1089 aa3.88□□□□□ -1.79
HERC1-215ENST00000561436 ATOH1Q92858 354 aaPredicted RBP3.88□□□□□ -1.79
HERC1-215ENST00000561436 RPL36ALQ969Q0 106 aaKnown RBP3.88□□□□□ -1.79
HERC1-215ENST00000561436 ZC3HAV1LQ96H79 300 aaKnown RBP3.88□□□□□ -1.79
HERC1-215ENST00000561436 ZNF48Q96MX3 618 aaPredicted RBP3.88□□□□□ -1.79
HERC1-215ENST00000561436 PIP5K1AQ99755 562 aa3.88□□□□□ -1.79
HERC1-215ENST00000561436 NUDT16L1Q9BRJ7 211 aaKnown RBP3.88□□□□□ -1.79
HERC1-215ENST00000561436 C1QTNF7Q9BXJ2 289 aa3.88□□□□□ -1.79
HERC1-215ENST00000561436 MUC13Q9H3R2 512 aa3.88□□□□□ -1.79
HERC1-215ENST00000561436 SH2D4AQ9H788 454 aa3.88□□□□□ -1.79
HERC1-215ENST00000561436 BRF2Q9HAW0 419 aa3.88□□□□□ -1.79
HERC1-215ENST00000561436 ELOVL5Q9NYP7 299 aa3.88□□□□□ -1.79
HERC1-215ENST00000561436 SEL1LQ9UBV2 794 aa3.88□□□□□ -1.79
HERC1-215ENST00000561436 TSPYL4Q9UJ04 414 aa3.88□□□□□ -1.79
HERC1-215ENST00000561436 A4GNTQ9UNA3 340 aa3.88□□□□□ -1.79
HERC1-215ENST00000561436 FAM96BQ9Y3D0 163 aa3.88□□□□□ -1.79
HERC1-215ENST00000561436 KCNE2Q9Y6J6 123 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms