RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 UGT1A10Q9HAW8 530 aa10.3□□□□□ -0.76
USP3-219ENST00000561326 UGT1A8Q9HAW9 530 aa10.3□□□□□ -0.76
USP3-219ENST00000561326 SSU72Q9NP77 194 aaKnown RBP10.3□□□□□ -0.76
USP3-219ENST00000561326 CACNA2D2Q9NY47 1150 aa10.3□□□□□ -0.76
USP3-219ENST00000561326 NKIRAS1Q9NYS0 192 aa10.3□□□□□ -0.76
USP3-219ENST00000561326 PKD2L2Q9NZM6 624 aa10.3□□□□□ -0.76
USP3-219ENST00000561326 CORO1CQ9ULV4 474 aaPredicted RBP10.3□□□□□ -0.76
USP3-219ENST00000561326 SMG5Q9UPR3 1016 aaKnown RBP10.3□□□□□ -0.76
USP3-219ENST00000561326 A0A1W2PPM1 405 aa10.29□□□□□ -0.76
USP3-219ENST00000561326 RGSL1A5PLK6 1076 aa10.29□□□□□ -0.76
USP3-219ENST00000561326 NPIPB15A6NHN6 443 aaPredicted RBP10.29□□□□□ -0.76
USP3-219ENST00000561326 A8MX80 341 aa10.29□□□□□ -0.76
USP3-219ENST00000561326 LOC730098B7Z3J9 87 aa10.29□□□□□ -0.76
USP3-219ENST00000561326 NDUFS3O75489 264 aa10.29□□□□□ -0.76
USP3-219ENST00000561326 ADH1BP00325 375 aa10.29□□□□□ -0.76
USP3-219ENST00000561326 CTSLP07711 333 aa10.29□□□□□ -0.76
USP3-219ENST00000561326 TYK2P29597 1187 aa10.29□□□□□ -0.76
USP3-219ENST00000561326 LEPRP48357 1165 aaKnown RBP10.29□□□□□ -0.76
USP3-219ENST00000561326 CD151P48509 253 aa10.29□□□□□ -0.76
USP3-219ENST00000561326 CCT5P48643 541 aa10.29□□□□□ -0.76
USP3-219ENST00000561326 TTPAP49638 278 aa10.29□□□□□ -0.76
USP3-219ENST00000561326 LIMK2P53671 638 aa10.29□□□□□ -0.76
USP3-219ENST00000561326 SLC18A1P54219 525 aa10.29□□□□□ -0.76
USP3-219ENST00000561326 SLC12A2P55011 1212 aa10.29□□□□□ -0.76
USP3-219ENST00000561326 CACNG1Q06432 222 aa10.29□□□□□ -0.76
USP3-219ENST00000561326 PTPRCAPQ14761 206 aa10.29□□□□□ -0.76
USP3-219ENST00000561326 NUMA1Q14980 2115 aa10.29□□□□□ -0.76
USP3-219ENST00000561326 GPR33Q49SQ1 333 aa10.29□□□□□ -0.76
USP3-219ENST00000561326 C2orf27AQ580R0 203 aa10.29□□□□□ -0.76
USP3-219ENST00000561326 ZRANB3Q5FWF4 1079 aa10.29□□□□□ -0.76
USP3-219ENST00000561326 RNF187Q5TA31 235 aaPredicted RBP10.29□□□□□ -0.76
USP3-219ENST00000561326 FSTL4Q6MZW2 842 aa10.29□□□□□ -0.76
USP3-219ENST00000561326 TXNDC11Q6PKC3 985 aa10.29□□□□□ -0.76
USP3-219ENST00000561326 KDM7AQ6ZMT4 941 aa10.29□□□□□ -0.76
USP3-219ENST00000561326 ERN2Q76MJ5 926 aaKnown RBP10.29□□□□□ -0.76
USP3-219ENST00000561326 TAS2R42Q7RTR8 314 aa10.29□□□□□ -0.76
USP3-219ENST00000561326 ZC3HC1Q86WB0 502 aaKnown RBP10.29□□□□□ -0.76
USP3-219ENST00000561326 ZSWIM9Q86XI8 627 aa10.29□□□□□ -0.76
USP3-219ENST00000561326 RAVER1Q8IY67 606 aaKnown RBP10.29□□□□□ -0.76
USP3-219ENST00000561326 FAM3CQ92520 227 aa10.29□□□□□ -0.76
USP3-219ENST00000561326 RAB7BQ96AH8 199 aa10.29□□□□□ -0.76
USP3-219ENST00000561326 ACOX2Q99424 681 aa10.29□□□□□ -0.76
USP3-219ENST00000561326 SELENOSQ9BQE4 189 aa10.29□□□□□ -0.76
USP3-219ENST00000561326 HDAC8Q9BY41 377 aa10.29□□□□□ -0.76
USP3-219ENST00000561326 RSPH9Q9H1X1 276 aaPredicted RBP10.29□□□□□ -0.76
USP3-219ENST00000561326 SUDS3Q9H7L9 328 aaPredicted RBP10.29□□□□□ -0.76
USP3-219ENST00000561326 BPIFA1Q9NP55 256 aa10.29□□□□□ -0.76
USP3-219ENST00000561326 PCDH12Q9NPG4 1184 aa10.29□□□□□ -0.76
USP3-219ENST00000561326 INTS10Q9NVR2 710 aaKnown RBP10.29□□□□□ -0.76
USP3-219ENST00000561326 POLR3BQ9NW08 1133 aaPredicted RBP10.29□□□□□ -0.76
USP3-219ENST00000561326 MRPS17Q9Y2R5 130 aaKnown RBP10.29□□□□□ -0.76
USP3-219ENST00000561326 PSAT1Q9Y617 370 aa10.29□□□□□ -0.76
USP3-219ENST00000561326 ANKRD12Q6UB98 2062 aa10.29□□□□□ -0.76
USP3-219ENST00000561326 FAM47DPA6NHR8 397 aa10.28□□□□□ -0.76
USP3-219ENST00000561326 GOLGA8CPA6NN73 597 aa10.28□□□□□ -0.76
USP3-219ENST00000561326 H0Y858 1186 aa10.28□□□□□ -0.76
USP3-219ENST00000561326 PSMD11O00231 422 aa10.28□□□□□ -0.76
USP3-219ENST00000561326 NEMP1O14524 444 aa10.28□□□□□ -0.76
USP3-219ENST00000561326 COPEO14579 308 aa10.28□□□□□ -0.76
USP3-219ENST00000561326 PRPF4O43172 522 aaKnown RBP eCLIP10.28□□□□□ -0.76
USP3-219ENST00000561326 HAUS5O94927 633 aa10.28□□□□□ -0.76
USP3-219ENST00000561326 S1PR4O95977 384 aa10.28□□□□□ -0.76
USP3-219ENST00000561326 EGFP01133 1207 aa10.28□□□□□ -0.76
USP3-219ENST00000561326 MPOP05164 745 aa10.28□□□□□ -0.76
USP3-219ENST00000561326 ITGALP20701 1170 aa10.28□□□□□ -0.76
USP3-219ENST00000561326 C5AR1P21730 350 aa10.28□□□□□ -0.76
USP3-219ENST00000561326 MC4RP32245 332 aa10.28□□□□□ -0.76
USP3-219ENST00000561326 SPAM1P38567 509 aa10.28□□□□□ -0.76
USP3-219ENST00000561326 WASP42768 502 aa10.28□□□□□ -0.76
USP3-219ENST00000561326 SLC1A2P43004 574 aa10.28□□□□□ -0.76
USP3-219ENST00000561326 SERPINB8P50452 374 aa10.28□□□□□ -0.76
USP3-219ENST00000561326 CLCN5P51795 746 aa10.28□□□□□ -0.76
USP3-219ENST00000561326 NEK3P51956 506 aa10.28□□□□□ -0.76
USP3-219ENST00000561326 POU4F1Q01851 419 aa10.28□□□□□ -0.76
USP3-219ENST00000561326 PTSQ03393 145 aa10.28□□□□□ -0.76
USP3-219ENST00000561326 SMAD1Q15797 465 aaKnown RBP10.28□□□□□ -0.76
USP3-219ENST00000561326 CST6Q15828 149 aa10.28□□□□□ -0.76
USP3-219ENST00000561326 CDKN3Q16667 212 aa10.28□□□□□ -0.76
USP3-219ENST00000561326 EOGTQ5NDL2 527 aa10.28□□□□□ -0.76
USP3-219ENST00000561326 LRRC66Q68CR7 880 aa10.28□□□□□ -0.76
USP3-219ENST00000561326 ZNF776Q68DI1 518 aaPredicted RBP10.28□□□□□ -0.76
USP3-219ENST00000561326 ZNF852Q6ZMS4 543 aa10.28□□□□□ -0.76
USP3-219ENST00000561326 DPPA4Q7L190 304 aa10.28□□□□□ -0.76
USP3-219ENST00000561326 SNX20Q7Z614 316 aa10.28□□□□□ -0.76
USP3-219ENST00000561326 CCDC91Q7Z6B0 441 aa10.28□□□□□ -0.76
USP3-219ENST00000561326 MMAAQ8IVH4 418 aaKnown RBP10.28□□□□□ -0.76
USP3-219ENST00000561326 DENND6AQ8IWF6 608 aa10.28□□□□□ -0.76
USP3-219ENST00000561326 ADHFE1Q8IWW8 467 aa10.28□□□□□ -0.76
USP3-219ENST00000561326 OR2T3Q8NH03 318 aa10.28□□□□□ -0.76
USP3-219ENST00000561326 MAFAQ8NHW3 353 aaPredicted RBP10.28□□□□□ -0.76
USP3-219ENST00000561326 VOPP1Q96AW1 172 aa10.28□□□□□ -0.76
USP3-219ENST00000561326 TSPAN17Q96FV3 270 aa10.28□□□□□ -0.76
USP3-219ENST00000561326 SHDQ96IW2 340 aa10.28□□□□□ -0.76
USP3-219ENST00000561326 VPS39Q96JC1 886 aa10.28□□□□□ -0.76
USP3-219ENST00000561326 TSNARE1Q96NA8 513 aa10.28□□□□□ -0.76
USP3-219ENST00000561326 PLEKHG4BQ96PX9 1271 aa10.28□□□□□ -0.76
USP3-219ENST00000561326 SMIM14Q96QK8 99 aa10.28□□□□□ -0.76
USP3-219ENST00000561326 GABRG3Q99928 467 aa10.28□□□□□ -0.76
USP3-219ENST00000561326 IQCGQ9H095 443 aaKnown RBP10.28□□□□□ -0.76
USP3-219ENST00000561326 CCDC68Q9H2F9 335 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms