RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 DMPKQ09013 629 aa16.49■□□□□ 0.23
TPM1-228ENST00000560975 TRIM32Q13049 653 aa16.49■□□□□ 0.23
TPM1-228ENST00000560975 SELENBP1Q13228 472 aa16.49■□□□□ 0.23
TPM1-228ENST00000560975 PAGE2BQ5JRK9 111 aa16.49■□□□□ 0.23
TPM1-228ENST00000560975 PKN3Q6P5Z2 889 aa16.49■□□□□ 0.23
TPM1-228ENST00000560975 ANKRD13BQ86YJ7 626 aa16.49■□□□□ 0.23
TPM1-228ENST00000560975 SLC22A17Q8WUG5 538 aa16.49■□□□□ 0.23
TPM1-228ENST00000560975 ZNF641Q96N77 438 aaPredicted RBP16.49■□□□□ 0.23
TPM1-228ENST00000560975 IL12RB2Q99665 862 aa16.49■□□□□ 0.23
TPM1-228ENST00000560975 CHID1Q9BWS9 393 aa16.49■□□□□ 0.23
TPM1-228ENST00000560975 CCDC90BQ9GZT6 254 aa16.49■□□□□ 0.23
TPM1-228ENST00000560975 GSTO2Q9H4Y5 243 aa16.49■□□□□ 0.23
TPM1-228ENST00000560975 ALG2Q9H553 416 aa16.49■□□□□ 0.23
TPM1-228ENST00000560975 ATP13A3Q9H7F0 1226 aa16.49■□□□□ 0.23
TPM1-228ENST00000560975 ZNF277Q9NRM2 450 aaPredicted RBP16.49■□□□□ 0.23
TPM1-228ENST00000560975 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.49■□□□□ 0.23
TPM1-228ENST00000560975 BAG5Q9UL15 447 aa16.49■□□□□ 0.23
TPM1-228ENST00000560975 NOX1Q9Y5S8 564 aa16.49■□□□□ 0.23
TPM1-228ENST00000560975 A6NL46 340 aa16.49■□□□□ 0.23
TPM1-228ENST00000560975 ARF4P18085 180 aaPredicted RBP16.49■□□□□ 0.23
TPM1-228ENST00000560975 KPNA2P52292 529 aaKnown RBP16.49■□□□□ 0.23
TPM1-228ENST00000560975 TNFAIP2Q03169 654 aa16.49■□□□□ 0.23
TPM1-228ENST00000560975 NFYCQ13952 458 aa16.49■□□□□ 0.23
TPM1-228ENST00000560975 MAPRE1Q15691 268 aaKnown RBP16.49■□□□□ 0.23
TPM1-228ENST00000560975 INAQ16352 499 aa16.49■□□□□ 0.23
TPM1-228ENST00000560975 MEP1AQ16819 746 aa16.49■□□□□ 0.23
TPM1-228ENST00000560975 NAPEPLDQ6IQ20 393 aa16.49■□□□□ 0.23
TPM1-228ENST00000560975 PRMT9Q6P2P2 845 aa16.49■□□□□ 0.23
TPM1-228ENST00000560975 GADL1Q6ZQY3 521 aa16.49■□□□□ 0.23
TPM1-228ENST00000560975 STK32CQ86UX6 486 aa16.49■□□□□ 0.23
TPM1-228ENST00000560975 MIER2Q8N344 545 aa16.49■□□□□ 0.23
TPM1-228ENST00000560975 MINDY1Q8N5J2 469 aa16.49■□□□□ 0.23
TPM1-228ENST00000560975 PSD2Q9BQI7 771 aa16.49■□□□□ 0.23
TPM1-228ENST00000560975 ALG9Q9H6U8 611 aa16.49■□□□□ 0.23
TPM1-228ENST00000560975 ATP11BQ9Y2G3 1177 aa16.49■□□□□ 0.23
TPM1-228ENST00000560975 A0A087X1B8 175 aa16.48■□□□□ 0.23
TPM1-228ENST00000560975 ERI2A8K979 691 aaKnown RBP16.48■□□□□ 0.23
TPM1-228ENST00000560975 BBIP1A8MTZ0 92 aa16.48■□□□□ 0.23
TPM1-228ENST00000560975 PTGES3LE9PB15 166 aa16.48■□□□□ 0.23
TPM1-228ENST00000560975 PSMD11O00231 422 aa16.48■□□□□ 0.23
TPM1-228ENST00000560975 CYP2C8P10632 490 aa16.48■□□□□ 0.23
TPM1-228ENST00000560975 TCF3P15923 654 aa16.48■□□□□ 0.23
TPM1-228ENST00000560975 ARCN1P48444 511 aaKnown RBP16.48■□□□□ 0.23
TPM1-228ENST00000560975 TUBA3CQ13748 450 aa16.48■□□□□ 0.23
TPM1-228ENST00000560975 AGAP7PQ5VUJ5 663 aa16.48■□□□□ 0.23
TPM1-228ENST00000560975 SLC16A12Q6ZSM3 486 aa16.48■□□□□ 0.23
TPM1-228ENST00000560975 EXOC8Q8IYI6 725 aa16.48■□□□□ 0.23
TPM1-228ENST00000560975 TTC39CQ8N584 583 aa16.48■□□□□ 0.23
TPM1-228ENST00000560975 FKBP10Q96AY3 582 aa16.48■□□□□ 0.23
TPM1-228ENST00000560975 AKIP1Q9NQ31 210 aa16.48■□□□□ 0.23
TPM1-228ENST00000560975 PRMT7Q9NVM4 692 aaPredicted RBP16.48■□□□□ 0.23
TPM1-228ENST00000560975 ZNF229Q9UJW7 825 aa16.48■□□□□ 0.23
TPM1-228ENST00000560975 TCRBV5S2A0A599 114 aa16.48■□□□□ 0.23
TPM1-228ENST00000560975 ZBBXA8MT70 800 aa16.48■□□□□ 0.23
TPM1-228ENST00000560975 INMTO95050 263 aa16.48■□□□□ 0.23
TPM1-228ENST00000560975 TGM1P22735 817 aa16.48■□□□□ 0.23
TPM1-228ENST00000560975 CRHBPP24387 322 aa16.48■□□□□ 0.23
TPM1-228ENST00000560975 KCNC1P48547 511 aa16.48■□□□□ 0.23
TPM1-228ENST00000560975 TIGD2Q4W5G0 525 aa16.48■□□□□ 0.23
TPM1-228ENST00000560975 MFSD4BQ5TF39 518 aa16.48■□□□□ 0.23
TPM1-228ENST00000560975 HFE2Q6ZVN8 426 aa16.48■□□□□ 0.23
TPM1-228ENST00000560975 PDZD4Q76G19 769 aaPredicted RBP16.48■□□□□ 0.23
TPM1-228ENST00000560975 SLC22A16Q86VW1 577 aa16.48■□□□□ 0.23
TPM1-228ENST00000560975 TBC1D21Q8IYX1 336 aa16.48■□□□□ 0.23
TPM1-228ENST00000560975 ZCCHC7Q8N3Z6 543 aaKnown RBP16.48■□□□□ 0.23
TPM1-228ENST00000560975 ANKRD49Q8WVL7 239 aa16.48■□□□□ 0.23
TPM1-228ENST00000560975 KCNA7Q96RP8 456 aa16.48■□□□□ 0.23
TPM1-228ENST00000560975 HGH1Q9BTY7 390 aa16.48■□□□□ 0.23
TPM1-228ENST00000560975 WDR12Q9GZL7 423 aaKnown RBP16.48■□□□□ 0.23
TPM1-228ENST00000560975 EVLQ9UI08 416 aaPredicted RBP16.48■□□□□ 0.23
TPM1-228ENST00000560975 ERVK-11Q9UQG0 969 aa16.48■□□□□ 0.23
TPM1-228ENST00000560975 BTRCQ9Y297 605 aa16.48■□□□□ 0.23
TPM1-228ENST00000560975 PIP5K1BO14986 540 aa16.48■□□□□ 0.23
TPM1-228ENST00000560975 ARIH2O95376 493 aa16.48■□□□□ 0.23
TPM1-228ENST00000560975 FOXA1P55317 472 aa16.48■□□□□ 0.23
TPM1-228ENST00000560975 FPGSQ05932 587 aa16.48■□□□□ 0.23
TPM1-228ENST00000560975 PCID2Q5JVF3 399 aa16.48■□□□□ 0.23
TPM1-228ENST00000560975 AGAP9Q5VTM2 703 aa16.48■□□□□ 0.23
TPM1-228ENST00000560975 DNAJC14Q6Y2X3 702 aaPredicted RBP16.48■□□□□ 0.23
TPM1-228ENST00000560975 LINC00523Q86TU6 105 aa16.48■□□□□ 0.23
TPM1-228ENST00000560975 SULF1Q8IWU6 871 aa16.48■□□□□ 0.23
TPM1-228ENST00000560975 RYBPQ8N488 228 aaPredicted RBP16.48■□□□□ 0.23
TPM1-228ENST00000560975 TMEM125Q96AQ2 219 aa16.48■□□□□ 0.23
TPM1-228ENST00000560975 BIRC7Q96CA5 298 aa16.48■□□□□ 0.23
TPM1-228ENST00000560975 EXD2Q9NVH0 621 aa16.48■□□□□ 0.23
TPM1-228ENST00000560975 SLAMF8Q9P0V8 285 aa16.48■□□□□ 0.23
TPM1-228ENST00000560975 SCHIP1Q9P0W5 487 aaPredicted RBP16.48■□□□□ 0.23
TPM1-228ENST00000560975 FBXO5Q9UKT4 447 aa16.48■□□□□ 0.23
TPM1-228ENST00000560975 PCDHGA11Q9Y5H2 935 aa16.48■□□□□ 0.23
TPM1-228ENST00000560975 PCDHA9Q9Y5H5 950 aa16.48■□□□□ 0.23
TPM1-228ENST00000560975 CCDC162PA2VCL2 907 aa16.47■□□□□ 0.23
TPM1-228ENST00000560975 LRRC14BA6NHZ5 514 aa16.47■□□□□ 0.23
TPM1-228ENST00000560975 I6L893 689 aaPredicted RBP16.47■□□□□ 0.23
TPM1-228ENST00000560975 PTPRAP18433 802 aa16.47■□□□□ 0.23
TPM1-228ENST00000560975 LEPRP48357 1165 aaKnown RBP16.47■□□□□ 0.23
TPM1-228ENST00000560975 ARSFP54793 590 aa16.47■□□□□ 0.23
TPM1-228ENST00000560975 TMEM236Q5W0B7 351 aa16.47■□□□□ 0.23
TPM1-228ENST00000560975 NEPROQ6NW34 567 aa16.47■□□□□ 0.23
TPM1-228ENST00000560975 METTL7BQ6UX53 244 aa16.47■□□□□ 0.23
TPM1-228ENST00000560975 THAP5Q7Z6K1 395 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms