RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 FAM129CQ86XR2 697 aa18.51■□□□□ 0.55
TPM1-226ENST00000560959 NRSN1Q8IZ57 195 aa18.51■□□□□ 0.55
TPM1-226ENST00000560959 SLC30A5Q8TAD4 765 aa18.51■□□□□ 0.55
TPM1-226ENST00000560959 PATE1Q8WXA2 126 aa18.51■□□□□ 0.55
TPM1-226ENST00000560959 NUS1Q96E22 293 aa18.51■□□□□ 0.55
TPM1-226ENST00000560959 SELENOOQ9BVL4 669 aa18.51■□□□□ 0.55
TPM1-226ENST00000560959 KCTD3Q9Y597 815 aa18.51■□□□□ 0.55
TPM1-226ENST00000560959 ST14Q9Y5Y6 855 aa18.51■□□□□ 0.55
TPM1-226ENST00000560959 SPTAN1Q13813 2472 aaKnown RBP18.5■□□□□ 0.55
TPM1-226ENST00000560959 USP9XQ93008 2570 aaPredicted RBP18.5■□□□□ 0.55
TPM1-226ENST00000560959 SPENQ96T58 3664 aaKnown RBP18.5■□□□□ 0.55
TPM1-226ENST00000560959 PRR19A6NJB7 356 aa18.5■□□□□ 0.55
TPM1-226ENST00000560959 DUX1O43812 170 aa18.5■□□□□ 0.55
TPM1-226ENST00000560959 PRKAR1AP10644 381 aa18.5■□□□□ 0.55
TPM1-226ENST00000560959 CHRNB2P17787 502 aa18.5■□□□□ 0.55
TPM1-226ENST00000560959 MPSTP25325 297 aa18.5■□□□□ 0.55
TPM1-226ENST00000560959 NFKBIAP25963 317 aa18.5■□□□□ 0.55
TPM1-226ENST00000560959 OAS2P29728 719 aaKnown RBP18.5■□□□□ 0.55
TPM1-226ENST00000560959 ADCY8P40145 1251 aa18.5■□□□□ 0.55
TPM1-226ENST00000560959 PAPOLAP51003 745 aaKnown RBP18.5■□□□□ 0.55
TPM1-226ENST00000560959 ZNF143P52747 638 aaPredicted RBP18.5■□□□□ 0.55
TPM1-226ENST00000560959 AP1S1P61966 158 aa18.5■□□□□ 0.55
TPM1-226ENST00000560959 CDK3Q00526 305 aa18.5■□□□□ 0.55
TPM1-226ENST00000560959 MAP7Q14244 749 aa18.5■□□□□ 0.55
TPM1-226ENST00000560959 SCYL2Q6P3W7 929 aa18.5■□□□□ 0.55
TPM1-226ENST00000560959 PHLDB2Q86SQ0 1253 aa18.5■□□□□ 0.55
TPM1-226ENST00000560959 C3orf20Q8ND61 904 aa18.5■□□□□ 0.55
TPM1-226ENST00000560959 SLC20A1Q8WUM9 679 aa18.5■□□□□ 0.55
TPM1-226ENST00000560959 ADAM22Q9P0K1 906 aa18.5■□□□□ 0.55
TPM1-226ENST00000560959 TMEM9Q9P0T7 183 aa18.5■□□□□ 0.55
TPM1-226ENST00000560959 B4GALT6Q9UBX8 382 aa18.5■□□□□ 0.55
TPM1-226ENST00000560959 ANKRD36A6QL64 1941 aa18.49■□□□□ 0.55
TPM1-226ENST00000560959 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.49■□□□□ 0.55
TPM1-226ENST00000560959 EIF3CLB5ME19 914 aaKnown RBP18.49■□□□□ 0.55
TPM1-226ENST00000560959 TCN2P20062 427 aa18.49■□□□□ 0.55
TPM1-226ENST00000560959 RENBPP51606 427 aa18.49■□□□□ 0.55
TPM1-226ENST00000560959 DEFB109BQ30KR1 87 aa18.49■□□□□ 0.55
TPM1-226ENST00000560959 TCTN3Q6NUS6 607 aa18.49■□□□□ 0.55
TPM1-226ENST00000560959 TIPARPQ7Z3E1 657 aaKnown RBP18.49■□□□□ 0.55
TPM1-226ENST00000560959 OR10G6Q8NH81 332 aa18.49■□□□□ 0.55
TPM1-226ENST00000560959 STARD8Q92502 1023 aa18.49■□□□□ 0.55
TPM1-226ENST00000560959 DTD2Q96FN9 168 aa18.49■□□□□ 0.55
TPM1-226ENST00000560959 AHCYL2Q96HN2 611 aaKnown RBP18.49■□□□□ 0.55
TPM1-226ENST00000560959 EIF3CQ99613 913 aaKnown RBP18.49■□□□□ 0.55
TPM1-226ENST00000560959 CINPQ9BW66 212 aaPredicted RBP18.49■□□□□ 0.55
TPM1-226ENST00000560959 SLC39A8Q9C0K1 460 aa18.49■□□□□ 0.55
TPM1-226ENST00000560959 PSMD11O00231 422 aa18.48■□□□□ 0.55
TPM1-226ENST00000560959 HTRA2O43464 458 aaPredicted RBP18.48■□□□□ 0.55
TPM1-226ENST00000560959 HEXIM1O94992 359 aaKnown RBP18.48■□□□□ 0.55
TPM1-226ENST00000560959 CALB1P05937 261 aa18.48■□□□□ 0.55
TPM1-226ENST00000560959 ACTR1BP42025 376 aa18.48■□□□□ 0.55
TPM1-226ENST00000560959 NSFP46459 744 aaKnown RBP18.48■□□□□ 0.55
TPM1-226ENST00000560959 SCNN1BP51168 640 aa18.48■□□□□ 0.55
TPM1-226ENST00000560959 TPI1P60174 286 aa18.48■□□□□ 0.55
TPM1-226ENST00000560959 ACTR1AP61163 376 aa18.48■□□□□ 0.55
TPM1-226ENST00000560959 DPTQ07507 201 aa18.48■□□□□ 0.55
TPM1-226ENST00000560959 CNGA3Q16281 694 aa18.48■□□□□ 0.55
TPM1-226ENST00000560959 PHF13Q86YI8 300 aaPredicted RBP18.48■□□□□ 0.55
TPM1-226ENST00000560959 PAF1Q8N7H5 531 aa18.48■□□□□ 0.55
TPM1-226ENST00000560959 TEX19Q8NA77 164 aa18.48■□□□□ 0.55
TPM1-226ENST00000560959 PSKH2Q96QS6 385 aa18.48■□□□□ 0.55
TPM1-226ENST00000560959 SLC38A3Q99624 504 aa18.48■□□□□ 0.55
TPM1-226ENST00000560959 MYO9AB2RTY4 2548 aa18.47■□□□□ 0.55
TPM1-226ENST00000560959 ANKRD62A6NC57 917 aa18.47■□□□□ 0.55
TPM1-226ENST00000560959 A8MX80 341 aa18.47■□□□□ 0.55
TPM1-226ENST00000560959 CCP110O43303 1012 aa18.47■□□□□ 0.55
TPM1-226ENST00000560959 MTSS1O43312 755 aa18.47■□□□□ 0.55
TPM1-226ENST00000560959 SOCS5O75159 536 aa18.47■□□□□ 0.55
TPM1-226ENST00000560959 STK17BO94768 372 aa18.47■□□□□ 0.55
TPM1-226ENST00000560959 GFPT2O94808 682 aa18.47■□□□□ 0.55
TPM1-226ENST00000560959 VIPR1P32241 457 aa18.47■□□□□ 0.55
TPM1-226ENST00000560959 STAT5AP42229 794 aa18.47■□□□□ 0.55
TPM1-226ENST00000560959 IL10RBQ08334 325 aa18.47■□□□□ 0.55
TPM1-226ENST00000560959 LRP8Q14114 963 aa18.47■□□□□ 0.55
TPM1-226ENST00000560959 KDELC2Q7Z4H8 507 aa18.47■□□□□ 0.55
TPM1-226ENST00000560959 SFRP1Q8N474 314 aa18.47■□□□□ 0.55
TPM1-226ENST00000560959 ESX1Q8N693 406 aa18.47■□□□□ 0.55
TPM1-226ENST00000560959 PTCD2Q8WV60 388 aaKnown RBP18.47■□□□□ 0.55
TPM1-226ENST00000560959 CELF6Q96J87 481 aaKnown RBP18.47■□□□□ 0.55
TPM1-226ENST00000560959 CNPY3Q9BT09 278 aa18.47■□□□□ 0.55
TPM1-226ENST00000560959 SUDS3Q9H7L9 328 aaPredicted RBP18.47■□□□□ 0.55
TPM1-226ENST00000560959 PCDHB3Q9Y5E6 796 aa18.47■□□□□ 0.55
TPM1-226ENST00000560959 KCNMB2Q9Y691 235 aa18.47■□□□□ 0.55
TPM1-226ENST00000560959 TCRBV5S1A1TA0A578 114 aa18.46■□□□□ 0.55
TPM1-226ENST00000560959 MKRN2OSH3BPM6 223 aa18.46■□□□□ 0.55
TPM1-226ENST00000560959 DLGAP3O95886 979 aa18.46■□□□□ 0.55
TPM1-226ENST00000560959 NOP2P46087 812 aaKnown RBP18.46■□□□□ 0.55
TPM1-226ENST00000560959 POLD2P49005 469 aa18.46■□□□□ 0.55
TPM1-226ENST00000560959 COPB1P53618 953 aaKnown RBP18.46■□□□□ 0.55
TPM1-226ENST00000560959 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.46■□□□□ 0.55
TPM1-226ENST00000560959 TMCO4Q5TGY1 634 aa18.46■□□□□ 0.55
TPM1-226ENST00000560959 NLRP8Q86W28 1048 aa18.46■□□□□ 0.55
TPM1-226ENST00000560959 UNC5BQ8IZJ1 945 aa18.46■□□□□ 0.55
TPM1-226ENST00000560959 LZTR1Q8N653 840 aa18.46■□□□□ 0.55
TPM1-226ENST00000560959 NSMCE3Q96MG7 304 aa18.46■□□□□ 0.55
TPM1-226ENST00000560959 ZNF599Q96NL3 588 aa18.46■□□□□ 0.55
TPM1-226ENST00000560959 OR2M4Q96R27 311 aa18.46■□□□□ 0.55
TPM1-226ENST00000560959 PRDM8Q9NQV8 689 aa18.46■□□□□ 0.55
TPM1-226ENST00000560959 PLEKHB1Q9UF11 243 aaPredicted RBP18.46■□□□□ 0.55
TPM1-226ENST00000560959 PHTF1Q9UMS5 762 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms